| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is 238919244
Identifier: 238919244
GI number: 238919244
Start: 1320490
End: 1320603
Strand: Direct
Name: 238919244
Synonym: NT01EI_1333
Alternate gene names: NA
Gene position: 1320490-1320603 (Clockwise)
Preceding gene: 238919241
Following gene: 238919246
Centisome position: 34.64
GC content: 56.14
Gene sequence:
>114_bases TTGCCCCTAAGATCGGCTGTAGCATCGACACCCTACGCTATTGGCATCGCCTGCATGAACGTGATGCTGGCGCGGTCGGT GATTATGGACTCACAACTGCCGAACGTGGACTGA
Upstream 100 bases:
>100_bases TCATCCCGGGGTGACTCCCCCGAACTCCGTGCGCGGGCAGTCAGAATGCCGAGAGCGCAGCGGGATAGTTACTCTTCTGA ACCTGCTGCTATCAAATCCA
Downstream 100 bases:
>100_bases CCTGACCCACCCCGGCAGATTTTTTTCATGCAAAAAGTGTAGGGTGACGACCGACGCGCGGGCGCTTGGCCAACGCCGCC CGGCGGCCGGGAAAATTCCG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 37; Mature: 36
Protein sequence:
>37_residues MPLRSAVASTPYAIGIACMNVMLARSVIMDSQLPNVD
Sequences:
>Translated_37_residues MPLRSAVASTPYAIGIACMNVMLARSVIMDSQLPNVD >Mature_36_residues PLRSAVASTPYAIGIACMNVMLARSVIMDSQLPNVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 3937; Mature: 3806
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 10.8 %Met (Translated Protein) 13.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 8.3 %Met (Mature Protein) 11.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRSAVASTPYAIGIACMNVMLARSVIMDSQLPNVD CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PLRSAVASTPYAIGIACMNVMLARSVIMDSQLPNVD CCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA