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The map label for this gene is insF1 [C]

Identifier: 238919241

GI number: 238919241

Start: 1315428

End: 1316093

Strand: Direct

Name: insF1 [C]

Synonym: NT01EI_1330

Alternate gene names: 238919241

Gene position: 1315428-1316093 (Clockwise)

Preceding gene: 238919240

Following gene: 238919244

Centisome position: 34.5

GC content: 56.46

Gene sequence:

>666_bases
GTGCAAAAAATAACGCCGCTGCTGGATATCCTCTGCGGTAGTCATGGGGTCGGACCGGTATGTCATGAGCTGAATATCGC
CCCATCGATATACTACCGGTACCAGAATTACCATCAGCAACCTGAAACACGCAGTCAGCGTGACCGGCGTGATGATCACC
TGAAGCTGGAGATGGAGATACAGCGCGTGTACGACGAAAACTACCGTGTCTATGACATACGTAAGGTCTGGCGCCAGTTG
CAGCGTGCCGGCAGTAGTGTGGCCAGATGCACCATCGCGAGACTGATGAAAAACATGGGGCTTACCGGCGTGCTGCGGGG
TAAAAAATTACGCACTACAGTCAGCCGGAGAGAGGCTGTTGCAGGCGAGCGGGTAAACCGTCAGTTCGTGGCAGAGCGAC
CCAATCAGCTTTGGGTCGCCGACTTCACGTTCGTGAGGACGTGGCAGGGCTTCGCGTATGAGGCGTTCATCATCGACGTG
TTCGCCGGTGCCATTGTGGGCTGGCGTGTATCGTCATCGATGGAAACCACGTTCGTGCGGGATGCACTGGAGCCGGCGCT
GTGGGCCCGACGGCTGTCACAGCGTCAAAGGCTCGCAGTACACACAGCGACTGCAGGAAGTGGAGCTTTTGGCTTCAACA
GGGACCCTGTACACGATTCTGTGTAA

Upstream 100 bases:

>100_bases
TGTAAAGAAGAAAATGCTGCCGCTTGCCCGTCCGGTCGAAATGACCGCAGCATGCCAGTGTGAACCGTACCTATTTTTCA
CAGGTGGAGTTCTACCGTCT

Downstream 100 bases:

>100_bases
ATGCCTTTTCTCAGAAGTGACCGTCCAGACGATCACCGAACTCGATAATAAAGCGGCTCATTGCCATACGCCAGTCCCTC
AGCGGCATGGTCCATTTCTG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MQKITPLLDILCGSHGVGPVCHELNIAPSIYYRYQNYHQQPETRSQRDRRDDHLKLEMEIQRVYDENYRVYDIRKVWRQL
QRAGSSVARCTIARLMKNMGLTGVLRGKKLRTTVSRREAVAGERVNRQFVAERPNQLWVADFTFVRTWQGFAYEAFIIDV
FAGAIVGWRVSSSMETTFVRDALEPALWARRLSQRQRLAVHTATAGSGAFGFNRDPVHDSV

Sequences:

>Translated_221_residues
MQKITPLLDILCGSHGVGPVCHELNIAPSIYYRYQNYHQQPETRSQRDRRDDHLKLEMEIQRVYDENYRVYDIRKVWRQL
QRAGSSVARCTIARLMKNMGLTGVLRGKKLRTTVSRREAVAGERVNRQFVAERPNQLWVADFTFVRTWQGFAYEAFIIDV
FAGAIVGWRVSSSMETTFVRDALEPALWARRLSQRQRLAVHTATAGSGAFGFNRDPVHDSV
>Mature_221_residues
MQKITPLLDILCGSHGVGPVCHELNIAPSIYYRYQNYHQQPETRSQRDRRDDHLKLEMEIQRVYDENYRVYDIRKVWRQL
QRAGSSVARCTIARLMKNMGLTGVLRGKKLRTTVSRREAVAGERVNRQFVAERPNQLWVADFTFVRTWQGFAYEAFIIDV
FAGAIVGWRVSSSMETTFVRDALEPALWARRLSQRQRLAVHTATAGSGAFGFNRDPVHDSV

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=181, Percent_Identity=46.9613259668508, Blast_Score=166, Evalue=2e-41,
Organism=Escherichia coli, GI1788405, Length=194, Percent_Identity=26.8041237113402, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1787263, Length=194, Percent_Identity=26.8041237113402, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1786753, Length=194, Percent_Identity=26.8041237113402, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1786570, Length=194, Percent_Identity=26.8041237113402, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1786490, Length=194, Percent_Identity=26.8041237113402, Blast_Score=67, Evalue=7e-13,
Organism=Escherichia coli, GI1789981, Length=152, Percent_Identity=25, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 25516; Mature: 25516

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKITPLLDILCGSHGVGPVCHELNIAPSIYYRYQNYHQQPETRSQRDRRDDHLKLEMEI
CCCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEHHHHH
QRVYDENYRVYDIRKVWRQLQRAGSSVARCTIARLMKNMGLTGVLRGKKLRTTVSRREAV
HHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH
AGERVNRQFVAERPNQLWVADFTFVRTWQGFAYEAFIIDVFAGAIVGWRVSSSMETTFVR
HHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
DALEPALWARRLSQRQRLAVHTATAGSGAFGFNRDPVHDSV
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQKITPLLDILCGSHGVGPVCHELNIAPSIYYRYQNYHQQPETRSQRDRRDDHLKLEMEI
CCCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCCCHHHHHHCCCCCEEHHHHH
QRVYDENYRVYDIRKVWRQLQRAGSSVARCTIARLMKNMGLTGVLRGKKLRTTVSRREAV
HHHHCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHH
AGERVNRQFVAERPNQLWVADFTFVRTWQGFAYEAFIIDVFAGAIVGWRVSSSMETTFVR
HHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
DALEPALWARRLSQRQRLAVHTATAGSGAFGFNRDPVHDSV
HHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2159625; 2824781 [H]