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The map label for this gene is lst [H]

Identifier: 238919231

GI number: 238919231

Start: 1305444

End: 1306448

Strand: Direct

Name: lst [H]

Synonym: NT01EI_1314

Alternate gene names: 238919231

Gene position: 1305444-1306448 (Clockwise)

Preceding gene: 238919230

Following gene: 238919232

Centisome position: 34.24

GC content: 30.65

Gene sequence:

>1005_bases
TTGATTGGTATTCTCTGTATTATAAGATATAATGTTGCGCATTGTTGTTTAAAATGTCAAAAACATATGGATCTTTATAT
TTGTCTTACGCCATTACAGGCTTTAATTGCTGAAAAAATAAAGGAAAAGCAAAAAGACGATGGGCATCTTATATATGTTA
GTTCGAAAGATAATGATGTTAATAAAAGAGCTTATAATAAAATAAAAAAGCAGATGCAGTTGTCATTTTATATGGGGGAT
ACGCGAATATTATGGAAAATATTTCGTATCTTCTTTATTTTATGGGGTAAGAGGTATAAGACAGTATATGTCGCAAGCAT
AGATAATATAGTTGTTCACTATGCTTTATCCTACTCTAAGTTTGAAAGGATTGAGACGTTTGATGATGGAACATTAAATA
TTAGTTATGATGGTGTCTATTATCATGACCCGGTGAATCCCAGCCTAATTAATACGATTGCGCATAAAATTCTTTGCAAA
GCTTATGATCGAGAAAAAATACAGAAAAATAGCCGTAAGCATTATAGTATATATAAAGGGATGCGAAATATTATATCCAA
TGTAGAACTCGTAGATTTATTTGACTTCAATCGATCTTATAATCCAGGTGGGGATAATGAGATATCAATATTTTTAGGTA
GTGTCTATAAAGAAATTTGCAGTGAAAATAGAGATGATTTGATAAATAAAGTATTGTTGTTTTTAAAATCAAAAGAAAAC
ATGTATTATATTCCACACCCGCGAGGAGAGACTAACAGTTCATTTTCAAAATACTATCTCGATAGTGCTTTTTGCTGTAA
TGATTTGGCTGAGTTTATAGTTATTAGAATGCTTGGGGAATATTCAAAAATCAACTTATATGGATTTTCCAGTAGTGCTC
AATTTAATCTGATTAATGTTCCGGGGATATGTTGTTATGTAGTAAAGTATAATGGTTCCAATAAGATTATAGATGGCATT
AGTGATAAATTAGTAAAAATGGGTGCTGAGACTATCGTGCTGTAG

Upstream 100 bases:

>100_bases
CCGGGCGATGTCTACCAGACCTATGCCGATACCGAGGATCTGTTCGCGGTGACCGGCTACCGCCCGCAGGTGGGGGTGAA
GGCGGGGGTGCAGGCCTTTG

Downstream 100 bases:

>100_bases
TTGAGTGGAAATTACTATGCGGAAAAAAAATAAAATAGTTGTTATTGGAGCGGGAGGATTTTCAAAGGCAATATTGGATA
GCATTGATTACACTATGTAT

Product: Lst

Products: NA

Alternate protein names: Alpha 2,3-ST; Beta-galactoside alpha-2,3-sialyltransferase; Lipooligosaccharide sialyltransferase [H]

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MIGILCIIRYNVAHCCLKCQKHMDLYICLTPLQALIAEKIKEKQKDDGHLIYVSSKDNDVNKRAYNKIKKQMQLSFYMGD
TRILWKIFRIFFILWGKRYKTVYVASIDNIVVHYALSYSKFERIETFDDGTLNISYDGVYYHDPVNPSLINTIAHKILCK
AYDREKIQKNSRKHYSIYKGMRNIISNVELVDLFDFNRSYNPGGDNEISIFLGSVYKEICSENRDDLINKVLLFLKSKEN
MYYIPHPRGETNSSFSKYYLDSAFCCNDLAEFIVIRMLGEYSKINLYGFSSSAQFNLINVPGICCYVVKYNGSNKIIDGI
SDKLVKMGAETIVL

Sequences:

>Translated_334_residues
MIGILCIIRYNVAHCCLKCQKHMDLYICLTPLQALIAEKIKEKQKDDGHLIYVSSKDNDVNKRAYNKIKKQMQLSFYMGD
TRILWKIFRIFFILWGKRYKTVYVASIDNIVVHYALSYSKFERIETFDDGTLNISYDGVYYHDPVNPSLINTIAHKILCK
AYDREKIQKNSRKHYSIYKGMRNIISNVELVDLFDFNRSYNPGGDNEISIFLGSVYKEICSENRDDLINKVLLFLKSKEN
MYYIPHPRGETNSSFSKYYLDSAFCCNDLAEFIVIRMLGEYSKINLYGFSSSAQFNLINVPGICCYVVKYNGSNKIIDGI
SDKLVKMGAETIVL
>Mature_334_residues
MIGILCIIRYNVAHCCLKCQKHMDLYICLTPLQALIAEKIKEKQKDDGHLIYVSSKDNDVNKRAYNKIKKQMQLSFYMGD
TRILWKIFRIFFILWGKRYKTVYVASIDNIVVHYALSYSKFERIETFDDGTLNISYDGVYYHDPVNPSLINTIAHKILCK
AYDREKIQKNSRKHYSIYKGMRNIISNVELVDLFDFNRSYNPGGDNEISIFLGSVYKEICSENRDDLINKVLLFLKSKEN
MYYIPHPRGETNSSFSKYYLDSAFCCNDLAEFIVIRMLGEYSKINLYGFSSSAQFNLINVPGICCYVVKYNGSNKIIDGI
SDKLVKMGAETIVL

Specific function: Transfers sialic acid from the substrate CMP-sialic acid donor to the terminal beta-D-galactosyl-1,4-acetyl-beta-D- glucosamine on the lacto-N-neotetraose branch of the lipooligosaccharide [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 52 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012477 [H]

Pfam domain/function: PF07922 Glyco_transf_52 [H]

EC number: NA

Molecular weight: Translated: 38750; Mature: 38750

Theoretical pI: Translated: 8.76; Mature: 8.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGILCIIRYNVAHCCLKCQKHMDLYICLTPLQALIAEKIKEKQKDDGHLIYVSSKDNDV
CEEEEEEEHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
NKRAYNKIKKQMQLSFYMGDTRILWKIFRIFFILWGKRYKTVYVASIDNIVVHYALSYSK
HHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEEHHHEEEHHHHHHHH
FERIETFDDGTLNISYDGVYYHDPVNPSLINTIAHKILCKAYDREKIQKNSRKHYSIYKG
HHHHHCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MRNIISNVELVDLFDFNRSYNPGGDNEISIFLGSVYKEICSENRDDLINKVLLFLKSKEN
HHHHHCCCEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
MYYIPHPRGETNSSFSKYYLDSAFCCNDLAEFIVIRMLGEYSKINLYGFSSSAQFNLINV
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEC
PGICCYVVKYNGSNKIIDGISDKLVKMGAETIVL
CCEEEEEEEECCCCCCHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MIGILCIIRYNVAHCCLKCQKHMDLYICLTPLQALIAEKIKEKQKDDGHLIYVSSKDNDV
CEEEEEEEHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
NKRAYNKIKKQMQLSFYMGDTRILWKIFRIFFILWGKRYKTVYVASIDNIVVHYALSYSK
HHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCEEEEEEEEHHHEEEHHHHHHHH
FERIETFDDGTLNISYDGVYYHDPVNPSLINTIAHKILCKAYDREKIQKNSRKHYSIYKG
HHHHHCCCCCEEEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MRNIISNVELVDLFDFNRSYNPGGDNEISIFLGSVYKEICSENRDDLINKVLLFLKSKEN
HHHHHCCCEEEEEEECCCCCCCCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
MYYIPHPRGETNSSFSKYYLDSAFCCNDLAEFIVIRMLGEYSKINLYGFSSSAQFNLINV
EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEC
PGICCYVVKYNGSNKIIDGISDKLVKMGAETIVL
CCEEEEEEEECCCCCCHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]