| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is folE
Identifier: 238919194
GI number: 238919194
Start: 1261458
End: 1262120
Strand: Direct
Name: folE
Synonym: NT01EI_1277
Alternate gene names: 238919194
Gene position: 1261458-1262120 (Clockwise)
Preceding gene: 238919190
Following gene: 238919195
Centisome position: 33.09
GC content: 57.62
Gene sequence:
>663_bases ATGTCATCGCTAAGTAAAGAAGCTGCACTGGTGCACGAGGCGCTGCTGGCGCGCGGGTTGGAAACTCCACTGCGCGGCGA GCCGCTGGCGCGCGATACGCGCAAGGCGCAGATTGAGGCGCACATGACCGAGGTCATGAGGCTGTTGAATCTGGATCTGT CGGATGACAGCCTTGTAGAGACACCGTCGCGGATCGCCAAAATGTACGTGGACGAAATTTTTTCCGGCCTGGATTACGCC AACTTTCCTAAAATCACCATTATTGAAAATAAGATGGATGTCGATGAGATGGTGACGGTGCGCGATATTACGCTGACCAG CACCTGCGAACACCATTTCGTCACCATCGATGGCAAGGCGACGGTCGCCTACATCCCGAAAGAGAGGGTGATTGGGCTGT CCAAGATCAACCGGATTGTCCGCTTTTTTGCCCAGCGCCCACAGGTACAGGAGCGGTTGACCCAGCAAATCCTGGTGGCG CTGCAGACGCTGCTGGGGACCAAGAACGTCGCCGTCTCCATCGATGCGGTGCACTACTGCGTCAAAGCCCGCGGCGTACG CGATGCGACCAGCGCGACCACCACCACCTCGCTGGGCGGGCTGTTTAAAACCAGTCAAAATACCCGCCAGGAGTTTCTGC GCGCGGTGCGTCACCACGTTTAG
Upstream 100 bases:
>100_bases TGTCATATCGGTGCAGAGCCAGAATGAGATCATCGGTGTGGGGAGGCTGGCGCGGGGCCGGGGTTCAGGGGCAGAGATAA GAGGTATCGGGAGATAAGTG
Downstream 100 bases:
>100_bases CCCGGGCTCAGAAGCATGAAGACACCGGCGCGATACCGGCGTCCTCATCTGCAAACGACGGGGAATACCACCATGGCCGG GGTGCCTGTGGCGGCGGAGC
Product: GTP cyclohydrolase I
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MSSLSKEAALVHEALLARGLETPLRGEPLARDTRKAQIEAHMTEVMRLLNLDLSDDSLVETPSRIAKMYVDEIFSGLDYA NFPKITIIENKMDVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKERVIGLSKINRIVRFFAQRPQVQERLTQQILVA LQTLLGTKNVAVSIDAVHYCVKARGVRDATSATTTTSLGGLFKTSQNTRQEFLRAVRHHV
Sequences:
>Translated_220_residues MSSLSKEAALVHEALLARGLETPLRGEPLARDTRKAQIEAHMTEVMRLLNLDLSDDSLVETPSRIAKMYVDEIFSGLDYA NFPKITIIENKMDVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKERVIGLSKINRIVRFFAQRPQVQERLTQQILVA LQTLLGTKNVAVSIDAVHYCVKARGVRDATSATTTTSLGGLFKTSQNTRQEFLRAVRHHV >Mature_219_residues SSLSKEAALVHEALLARGLETPLRGEPLARDTRKAQIEAHMTEVMRLLNLDLSDDSLVETPSRIAKMYVDEIFSGLDYAN FPKITIIENKMDVDEMVTVRDITLTSTCEHHFVTIDGKATVAYIPKERVIGLSKINRIVRFFAQRPQVQERLTQQILVAL QTLLGTKNVAVSIDAVHYCVKARGVRDATSATTTTSLGGLFKTSQNTRQEFLRAVRHHV
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family
Homologues:
Organism=Homo sapiens, GI66932968, Length=187, Percent_Identity=37.9679144385027, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI4503949, Length=187, Percent_Identity=37.9679144385027, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI66932970, Length=146, Percent_Identity=37.6712328767123, Blast_Score=90, Evalue=1e-18, Organism=Homo sapiens, GI66932972, Length=146, Percent_Identity=37.6712328767123, Blast_Score=90, Evalue=2e-18, Organism=Escherichia coli, GI1788476, Length=221, Percent_Identity=86.4253393665158, Blast_Score=376, Evalue=1e-106, Organism=Caenorhabditis elegans, GI17560486, Length=172, Percent_Identity=41.2790697674419, Blast_Score=129, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6321706, Length=182, Percent_Identity=39.5604395604396, Blast_Score=127, Evalue=1e-30, Organism=Drosophila melanogaster, GI24656796, Length=188, Percent_Identity=39.3617021276596, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24656782, Length=188, Percent_Identity=39.3617021276596, Blast_Score=113, Evalue=7e-26, Organism=Drosophila melanogaster, GI24656791, Length=188, Percent_Identity=39.3617021276596, Blast_Score=113, Evalue=1e-25,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): GCH1_EDWI9 (C5BCL9)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002932709.1 - GeneID: 7960607 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_1277 - OMA: ARFMSMI - ProtClustDB: PRK09347 - GO: GO:0005737 - HAMAP: MF_00223 - InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 - TIGRFAMs: TIGR00063
Pfam domain/function: PF01227 GTP_cyclohydroI
EC number: =3.5.4.16
Molecular weight: Translated: 24618; Mature: 24487
Theoretical pI: Translated: 8.71; Mature: 8.71
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLSKEAALVHEALLARGLETPLRGEPLARDTRKAQIEAHMTEVMRLLNLDLSDDSLVE CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH TPSRIAKMYVDEIFSGLDYANFPKITIIENKMDVDEMVTVRDITLTSTCEHHFVTIDGKA HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHEEEECCCCCEEEEECCCE TVAYIPKERVIGLSKINRIVRFFAQRPQVQERLTQQILVALQTLLGTKNVAVSIDAVHYC EEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH VKARGVRDATSATTTTSLGGLFKTSQNTRQEFLRAVRHHV HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure SSLSKEAALVHEALLARGLETPLRGEPLARDTRKAQIEAHMTEVMRLLNLDLSDDSLVE CCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH TPSRIAKMYVDEIFSGLDYANFPKITIIENKMDVDEMVTVRDITLTSTCEHHFVTIDGKA HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHEEEECCCCCEEEEECCCE TVAYIPKERVIGLSKINRIVRFFAQRPQVQERLTQQILVALQTLLGTKNVAVSIDAVHYC EEEECCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHH VKARGVRDATSATTTTSLGGLFKTSQNTRQEFLRAVRHHV HHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA