| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yaiE [C]
Identifier: 238919103
GI number: 238919103
Start: 1168502
End: 1168789
Strand: Direct
Name: yaiE [C]
Synonym: NT01EI_1174
Alternate gene names: 238919103
Gene position: 1168502-1168789 (Clockwise)
Preceding gene: 238919102
Following gene: 238919106
Centisome position: 30.65
GC content: 57.99
Gene sequence:
>288_bases ATGCTGAATGTTAATGAGTATTTTGCAGGGAAAGTGAAGTCGATTGGCTATGACAGCGGCAGTATCGGCCGCGCCAGCGT GGGAGTGATGGAAAAGGGCGAGTATACCTTTACCACGGATCGGCCGGAGGAGATGACGGTGGTGACCGGCGCGCTGCGCG TGCTGATCCCCGGTGCCCCGGACTGGCAGGTGTTTACTCCGGGAGAGACCTTTTTTGTGCCGGAGCGCAGCGAATTCAAC CTGCAAGTCGCGGAGCCCAGCGCCTACCTGTGCAAGTATCTGAGTTGA
Upstream 100 bases:
>100_bases CGCGCCCGCGCTGGCGATCGCACCCTGGAGAAACGGCGCGTGACAGCCCCCGTTTTTTTGACCAAGATGAGACGACCACT CACGTTAAAGAGGCCACACT
Downstream 100 bases:
>100_bases TCATCTGACAAGCGGGGGCTCCGCCCTCAGCCCATTCGACTGACCCAGACGGCGATACCCGCCACTGGGTCCTATCCTAT GCGCGCCAGCGCCGCTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MLNVNEYFAGKVKSIGYDSGSIGRASVGVMEKGEYTFTTDRPEEMTVVTGALRVLIPGAPDWQVFTPGETFFVPERSEFN LQVAEPSAYLCKYLS
Sequences:
>Translated_95_residues MLNVNEYFAGKVKSIGYDSGSIGRASVGVMEKGEYTFTTDRPEEMTVVTGALRVLIPGAPDWQVFTPGETFFVPERSEFN LQVAEPSAYLCKYLS >Mature_95_residues MLNVNEYFAGKVKSIGYDSGSIGRASVGVMEKGEYTFTTDRPEEMTVVTGALRVLIPGAPDWQVFTPGETFFVPERSEFN LQVAEPSAYLCKYLS
Specific function: Unknown
COG id: COG3123
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0345 family
Homologues:
Organism=Escherichia coli, GI1786590, Length=94, Percent_Identity=68.0851063829787, Blast_Score=138, Evalue=8e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1174_EDWI9 (C5BHN8)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002932617.1 - ProteinModelPortal: C5BHN8 - GeneID: 7960920 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_1174 - OMA: AVDTAYL - ProtClustDB: PRK10579 - HAMAP: MF_01537 - InterPro: IPR009664 - InterPro: IPR014710 - Gene3D: G3DSA:2.60.120.10
Pfam domain/function: PF06865 DUF1255
EC number: NA
Molecular weight: Translated: 10493; Mature: 10493
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNVNEYFAGKVKSIGYDSGSIGRASVGVMEKGEYTFTTDRPEEMTVVTGALRVLIPGAP CCCCCCCCCCCEEECCCCCCCCCCEEECEEECCCEEEECCCCCCEEEEEEEEEEEECCCC DWQVFTPGETFFVPERSEFNLQVAEPSAYLCKYLS CCEEECCCCEEEECCCCCCEEEEECCHHHHHEECC >Mature Secondary Structure MLNVNEYFAGKVKSIGYDSGSIGRASVGVMEKGEYTFTTDRPEEMTVVTGALRVLIPGAP CCCCCCCCCCCEEECCCCCCCCCCEEECEEECCCEEEECCCCCCEEEEEEEEEEEECCCC DWQVFTPGETFFVPERSEFNLQVAEPSAYLCKYLS CCEEECCCCEEEECCCCCCEEEEECCHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA