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The map label for this gene is fimA [H]

Identifier: 238919060

GI number: 238919060

Start: 1124381

End: 1124914

Strand: Direct

Name: fimA [H]

Synonym: NT01EI_1128

Alternate gene names: 238919060

Gene position: 1124381-1124914 (Clockwise)

Preceding gene: 238919059

Following gene: 238919061

Centisome position: 29.49

GC content: 50.19

Gene sequence:

>534_bases
ATGAAAAAATTTTTACTGCCTGTTATGGTTCTGGCCGCTGCCGCGGTGAGTGGCCAGGCAAGTGCAGCTAACGGTAAAGT
TGAGTTTACAGGTGAAATCGTTAATTCTACCTGTCAAGTAAGCAGCGACTCTCAAAATATTAATGTGTATTTAGGTAAAT
ATCCGACCTCCGCATTTAAAACGGTTGGCGATAAGTCTGCATCCAAGGCTTTCCAGATTAACCTGGAGCAGTGTGAGCCG
GGAACTTACACCGTCCGTTTCGATGGCAACACCGTTGCCGGTCATCCTGACCTGCTGGCCGTCTCCAGTAGTGGCGCAAC
AGCGGCGGCGAAAGGCGTGGGTATTGAAATTACGGACGTTAACGGCAAAGCGTTCCCGATCGCCGATCAGAGCCAGGGTG
ATGTGCCCACGGTGACGGTCGTTAGCGATAAGAAAGCGATATTTAACCTGCAGGCACGCTATCGCTCTTATGTTAATACG
GTTACCGCCGGTCTGGCCAACGCGACCAGTCCGTTCACCATCGAATATAAATAA

Upstream 100 bases:

>100_bases
TTATTTTTTTTACTTTTCCATCATGCAAAATATATTTACAACCTCGTTTCGCGCCACTCTGGTAGGCGGGTGTTTTTAAT
TGATAAACGGAGTTATGATA

Downstream 100 bases:

>100_bases
TTATTCGTCGGAATATTCGGCCAGGGATGGTTCGTATAGAGGAATAAGATGAACCGAATCGTTGCCGTATTATTACTGGT
GAGCACTTTTACTGCCCATG

Product: major fimbrial subunit protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MKKFLLPVMVLAAAAVSGQASAANGKVEFTGEIVNSTCQVSSDSQNINVYLGKYPTSAFKTVGDKSASKAFQINLEQCEP
GTYTVRFDGNTVAGHPDLLAVSSSGATAAAKGVGIEITDVNGKAFPIADQSQGDVPTVTVVSDKKAIFNLQARYRSYVNT
VTAGLANATSPFTIEYK

Sequences:

>Translated_177_residues
MKKFLLPVMVLAAAAVSGQASAANGKVEFTGEIVNSTCQVSSDSQNINVYLGKYPTSAFKTVGDKSASKAFQINLEQCEP
GTYTVRFDGNTVAGHPDLLAVSSSGATAAAKGVGIEITDVNGKAFPIADQSQGDVPTVTVVSDKKAIFNLQARYRSYVNT
VTAGLANATSPFTIEYK
>Mature_177_residues
MKKFLLPVMVLAAAAVSGQASAANGKVEFTGEIVNSTCQVSSDSQNINVYLGKYPTSAFKTVGDKSASKAFQINLEQCEP
GTYTVRFDGNTVAGHPDLLAVSSSGATAAAKGVGIEITDVNGKAFPIADQSQGDVPTVTVVSDKKAIFNLQARYRSYVNT
VTAGLANATSPFTIEYK

Specific function: Fimbriae (also called pili), polar filaments radiating from the surface of the bacterium to a length of 0.5-1.5 micrometers and numbering 100-300 per cell, enable bacteria to colonize the epithelium of specific host organs [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1787781, Length=160, Percent_Identity=33.75, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI87081753, Length=163, Percent_Identity=35.5828220858896, Blast_Score=77, Evalue=6e-16,
Organism=Escherichia coli, GI1786746, Length=179, Percent_Identity=28.4916201117318, Blast_Score=69, Evalue=1e-13,
Organism=Escherichia coli, GI1789531, Length=184, Percent_Identity=32.0652173913043, Blast_Score=68, Evalue=4e-13,
Organism=Escherichia coli, GI87082421, Length=176, Percent_Identity=26.7045454545455, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1790769, Length=157, Percent_Identity=30.5732484076433, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 18479; Mature: 18479

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLLPVMVLAAAAVSGQASAANGKVEFTGEIVNSTCQVSSDSQNINVYLGKYPTSAFK
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEEECCCCCEEEEEEECCCCHHHH
TVGDKSASKAFQINLEQCEPGTYTVRFDGNTVAGHPDLLAVSSSGATAAAKGVGIEITDV
HCCCCCCCEEEEEEEECCCCCEEEEEECCCEECCCCCEEEEECCCCCEEECCCCEEEEEC
NGKAFPIADQSQGDVPTVTVVSDKKAIFNLQARYRSYVNTVTAGLANATSPFTIEYK
CCCEEECCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEC
>Mature Secondary Structure
MKKFLLPVMVLAAAAVSGQASAANGKVEFTGEIVNSTCQVSSDSQNINVYLGKYPTSAFK
CCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCEEEECCCCCEEEEEEECCCCHHHH
TVGDKSASKAFQINLEQCEPGTYTVRFDGNTVAGHPDLLAVSSSGATAAAKGVGIEITDV
HCCCCCCCEEEEEEEECCCCCEEEEEECCCEECCCCCEEEEECCCCCEEECCCCEEEEEC
NGKAFPIADQSQGDVPTVTVVSDKKAIFNLQARYRSYVNTVTAGLANATSPFTIEYK
CCCEEECCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1982455 [H]