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The map label for this gene is recR

Identifier: 238919042

GI number: 238919042

Start: 1105455

End: 1106060

Strand: Direct

Name: recR

Synonym: NT01EI_1110

Alternate gene names: 238919042

Gene position: 1105455-1106060 (Clockwise)

Preceding gene: 238919041

Following gene: 238919043

Centisome position: 29.0

GC content: 63.53

Gene sequence:

>606_bases
ATGCAGACCAGCCCGCTTCTTGAATCGCTGATGGAGGCGCTGCGCTGCTTGCCCGGCGTCGGCCCAAAGTCGGCCCAGCG
TATGGCGTTTCACCTGCTGCAGCGCGATCGCAGCGGAGGAATGCGTCTGGCGCAGGCGCTGACGCGCGCGATGTCGGAGA
TCGGACACTGCCGGGACTGCCGCACCTTCACCGAGCAGGAGGTCTGTACTATCTGTACTAACGCGCGTCGGCGTGAGAAT
GGACAGATCTGCGTAGTGGAGAGCCCGGCGGATATTCATGCCATTGAGCAGACCGGGCAGTACTCTGGGCGCTATTTCGT
GCTGATGGGGCACCTCTCTCCACTGGACGGTATCGGTCCACAGGATATTGGTCTGGACAGGCTGGAGGTGCGGCTGAGCC
AAGAGGCGGTCAGCGAAGTGATCCTCGCCACTAACCCAACGGTTGAGGGTGAGGCGACTGCCAATTACATCGCGGAAATG
TGTGCGGCGCACGGTGTGCTGGCCAGCCGAATCGCCCACGGCGTGCCGGTGGGGGGCGAGCTGGAGATGGTCGACGGTAC
CACTCTGTCCCACTCTTTGGCCGGGCGTCACCCGGTGACGCGCTGA

Upstream 100 bases:

>100_bases
TTAATGATGCCGCCCGTCGCATCGAAAGTGAGCAGAAAGAGCGTATGGCCTCTGTTTCCTCCGGTATGCAGCTGCCGCCG
GGCTTCAAGATGCCGTTCTG

Downstream 100 bases:

>100_bases
TCCGCTGACGCCGCCAAGGGATACGCCGTCTGGCGTATCCCTATCACGATCTTCTGCCTGGCGGTATATCGGGGGTTATC
CGCTGTTATGACCGCGTTCC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MQTSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRTFTEQEVCTICTNARRREN
GQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQDIGLDRLEVRLSQEAVSEVILATNPTVEGEATANYIAEM
CAAHGVLASRIAHGVPVGGELEMVDGTTLSHSLAGRHPVTR

Sequences:

>Translated_201_residues
MQTSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRTFTEQEVCTICTNARRREN
GQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQDIGLDRLEVRLSQEAVSEVILATNPTVEGEATANYIAEM
CAAHGVLASRIAHGVPVGGELEMVDGTTLSHSLAGRHPVTR
>Mature_201_residues
MQTSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDCRTFTEQEVCTICTNARRREN
GQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGPQDIGLDRLEVRLSQEAVSEVILATNPTVEGEATANYIAEM
CAAHGVLASRIAHGVPVGGELEMVDGTTLSHSLAGRHPVTR

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=87.9396984924623, Blast_Score=363, Evalue=1e-102,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_EDWI9 (C5BD00)

Other databases:

- EMBL:   CP001600
- RefSeq:   YP_002932556.1
- GeneID:   7960695
- GenomeReviews:   CP001600_GR
- KEGG:   eic:NT01EI_1110
- OMA:   HGAISPM
- ProtClustDB:   CLSK2812963
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21748; Mature: 21748

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHH
RTFTEQEVCTICTNARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGP
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
QDIGLDRLEVRLSQEAVSEVILATNPTVEGEATANYIAEMCAAHGVLASRIAHGVPVGGE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LEMVDGTTLSHSLAGRHPVTR
EEEECCCCHHHHHCCCCCCCC
>Mature Secondary Structure
MQTSPLLESLMEALRCLPGVGPKSAQRMAFHLLQRDRSGGMRLAQALTRAMSEIGHCRDC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHH
RTFTEQEVCTICTNARRRENGQICVVESPADIHAIEQTGQYSGRYFVLMGHLSPLDGIGP
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
QDIGLDRLEVRLSQEAVSEVILATNPTVEGEATANYIAEMCAAHGVLASRIAHGVPVGGE
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
LEMVDGTTLSHSLAGRHPVTR
EEEECCCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA