| Definition | Edwardsiella ictaluri 93-146 chromosome, complete genome. |
|---|---|
| Accession | NC_012779 |
| Length | 3,812,315 |
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The map label for this gene is yajQ [C]
Identifier: 238919005
GI number: 238919005
Start: 1067551
End: 1068042
Strand: Direct
Name: yajQ [C]
Synonym: NT01EI_1072
Alternate gene names: 238919005
Gene position: 1067551-1068042 (Clockwise)
Preceding gene: 238918997
Following gene: 238919009
Centisome position: 28.0
GC content: 56.1
Gene sequence:
>492_bases ATGCCGTCATTCGATATCGTATCCGAAGTGGATCTGCAGGAAGTCCGTAACGCCGTCGAAAACGCCACGCGTGAGCTGGC GTCGCGCTGGGATTTTCGTAATGTGGAAGCCAGCGTTGAGCTGAATGAGAAGAACGAAACCATCAAGCTCACCACCATTT CCGATTTTCAGGTCAAGCAGCTGGTCGATATTCTGCGCGAGAAGCTGGTCAAGCGCGGCATTGAGGCTGGCGCACTGGAG ATCCCGGAGGAGTGTGAGCACAGCGGCAAGCTTTACAGCGTAGAGGCGAAGCTGCAGAAAGGTATCGATAGCGTCATGGC GAAGAAGCTGGTGAAGCTGATTAAAGACAGCAAGCTGAAGGTGCAGACGCAGATCCAGGGCGAACAGCTGCGCGTCACCG GTAAGTCACGCGACGATCTACAGGGGGCGATGGCGCTGGTGCGCGGCGCCGATCTGGGCCAGCCATTCCAGTTTAATAAC TTCCGTGACTGA
Upstream 100 bases:
>100_bases GGTCGGTGTCCCGTCACCGTTAGCGGCGACAGCCCGGCGATCTTGCATCATGGCGCTGAGCCGTTATCATGCACGGCATT ATAGCGAGAGGAGAAGTAGC
Downstream 100 bases:
>100_bases TCCCTGCGGGGCAGGCTCTGGCTTGCCCTGAGGGGTTACTCTCCCGGTTCTGCGGCGCGTTGCAGGAACGTTTCCAACGC CTCGCGGCTGGTCATCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 163; Mature: 162
Protein sequence:
>163_residues MPSFDIVSEVDLQEVRNAVENATRELASRWDFRNVEASVELNEKNETIKLTTISDFQVKQLVDILREKLVKRGIEAGALE IPEECEHSGKLYSVEAKLQKGIDSVMAKKLVKLIKDSKLKVQTQIQGEQLRVTGKSRDDLQGAMALVRGADLGQPFQFNN FRD
Sequences:
>Translated_163_residues MPSFDIVSEVDLQEVRNAVENATRELASRWDFRNVEASVELNEKNETIKLTTISDFQVKQLVDILREKLVKRGIEAGALE IPEECEHSGKLYSVEAKLQKGIDSVMAKKLVKLIKDSKLKVQTQIQGEQLRVTGKSRDDLQGAMALVRGADLGQPFQFNN FRD >Mature_162_residues PSFDIVSEVDLQEVRNAVENATRELASRWDFRNVEASVELNEKNETIKLTTISDFQVKQLVDILREKLVKRGIEAGALEI PEECEHSGKLYSVEAKLQKGIDSVMAKKLVKLIKDSKLKVQTQIQGEQLRVTGKSRDDLQGAMALVRGADLGQPFQFNNF RD
Specific function: Unknown
COG id: COG1666
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0234 family
Homologues:
Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=71.1656441717791, Blast_Score=242, Evalue=8e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1072_EDWI9 (C5BCJ0)
Other databases:
- EMBL: CP001600 - RefSeq: YP_002932519.1 - GeneID: 7960658 - GenomeReviews: CP001600_GR - KEGG: eic:NT01EI_1072 - OMA: LQFTNYR - ProtClustDB: CLSK2812943 - HAMAP: MF_00632 - InterPro: IPR007551
Pfam domain/function: PF04461 DUF520
EC number: NA
Molecular weight: Translated: 18402; Mature: 18271
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSFDIVSEVDLQEVRNAVENATRELASRWDFRNVEASVELNEKNETIKLTTISDFQVKQ CCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCHHHHH LVDILREKLVKRGIEAGALEIPEECEHSGKLYSVEAKLQKGIDSVMAKKLVKLIKDSKLK HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEE VQTQIQGEQLRVTGKSRDDLQGAMALVRGADLGQPFQFNNFRD EEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure PSFDIVSEVDLQEVRNAVENATRELASRWDFRNVEASVELNEKNETIKLTTISDFQVKQ CCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCHHHHH LVDILREKLVKRGIEAGALEIPEECEHSGKLYSVEAKLQKGIDSVMAKKLVKLIKDSKLK HHHHHHHHHHHCCCCCCCCCCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCEE VQTQIQGEQLRVTGKSRDDLQGAMALVRGADLGQPFQFNNFRD EEEEECCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA