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The map label for this gene is jag [H]

Identifier: 238917976

GI number: 238917976

Start: 2140585

End: 2141493

Strand: Reverse

Name: jag [H]

Synonym: EUBELI_02066

Alternate gene names: 238917976

Gene position: 2141493-2140585 (Counterclockwise)

Preceding gene: 238917977

Following gene: 238917975

Centisome position: 99.87

GC content: 35.31

Gene sequence:

>909_bases
ATGGAATATATTGAAGTTACAGGAAAATCTGTTGAAGAAGCTATAACTAATGCCTGCACTAAGCTTGGTATACCAAGTGA
TAAGCTTGATTATGAGATTATAGAAAAAGGAAATTCAGGATTTTTAGGAATATTTAATTCTAAGCCTGCTAAGATTAAGG
CAAGAGAAAAACAGGAAGAACCAGAAGTTAATTCTGTTGAGACTCCTAAAAAGTCAGAAGCACCTGTTCATGCAGAAAAA
AAATTCGAAAAGAAGGCAGATGATTTCAAGAAAGCAGAACCTAAGAAGGAATTTAAGTCTGAACCTAAGAAAGAGTTCAA
AAAGGAACACAAGCCTGCTGATAATCACAAGAATGCAGAAGTTAAGGAAGCACCTAAGGTTGAAGCACAGCCACAGCCTA
AGGAAGAGCCATTTACAGCAGAACAGAAGGAAGTTATTAAGAAGGATATACAGACATTCCTTAATAATATGTTTGGTGCT
ATGAGCATGGAAGTTAAGGCTGATATTACATTTGACGATGAAGAAAATAGCGTTAATGTAGATCTTTCTGGAGATAACAT
GGGTGTTCTTATCGGTAAGAGAGGACAGACACTTGATTCTATCCAGTATCTTACAAGTCTTGTAATTAACAAGAACAGTG
AGAAGTATGTAAGAGTTAAATTAGATACAGAGAACTATAGAAAGAGAAGAAAAGAAACTCTTGAGTCTCTTGCTAAGAAC
ATTGCATACAAGGTTAAGAGAAGCAGAAGACCTGTTTCACTTGAGCCTATGAACCCATATGAAAGAAGAATTATCCATTC
AGCACTTCAGGCAGATAAGTTTGTTTCTACAAGAAGTGAGGGTGAAGAACCTTTCAGACATGTTGTTGTTTATCTTGAAA
GAGAGAATAATAACAGATATAACAGATAA

Upstream 100 bases:

>100_bases
AATGGTAAGGCAGTTAAGCCGGGAAGTCTTGCTGATAAGGTTGGTATGGTATCAAGATACAATGAGGTCAACGATAAAAG
AAAATAGAGAGGGTTAAGTA

Downstream 100 bases:

>100_bases
TTAGATATATGATTTTATTAAATGCTGTGGTATTATTATCACAGCATTTTTTATATGGAGGATGGAAATGGAGGATACAA
TAGCAGCTATATCTACAAGT

Product: spoIIIJ-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MEYIEVTGKSVEEAITNACTKLGIPSDKLDYEIIEKGNSGFLGIFNSKPAKIKAREKQEEPEVNSVETPKKSEAPVHAEK
KFEKKADDFKKAEPKKEFKSEPKKEFKKEHKPADNHKNAEVKEAPKVEAQPQPKEEPFTAEQKEVIKKDIQTFLNNMFGA
MSMEVKADITFDDEENSVNVDLSGDNMGVLIGKRGQTLDSIQYLTSLVINKNSEKYVRVKLDTENYRKRRKETLESLAKN
IAYKVKRSRRPVSLEPMNPYERRIIHSALQADKFVSTRSEGEEPFRHVVVYLERENNNRYNR

Sequences:

>Translated_302_residues
MEYIEVTGKSVEEAITNACTKLGIPSDKLDYEIIEKGNSGFLGIFNSKPAKIKAREKQEEPEVNSVETPKKSEAPVHAEK
KFEKKADDFKKAEPKKEFKSEPKKEFKKEHKPADNHKNAEVKEAPKVEAQPQPKEEPFTAEQKEVIKKDIQTFLNNMFGA
MSMEVKADITFDDEENSVNVDLSGDNMGVLIGKRGQTLDSIQYLTSLVINKNSEKYVRVKLDTENYRKRRKETLESLAKN
IAYKVKRSRRPVSLEPMNPYERRIIHSALQADKFVSTRSEGEEPFRHVVVYLERENNNRYNR
>Mature_302_residues
MEYIEVTGKSVEEAITNACTKLGIPSDKLDYEIIEKGNSGFLGIFNSKPAKIKAREKQEEPEVNSVETPKKSEAPVHAEK
KFEKKADDFKKAEPKKEFKSEPKKEFKKEHKPADNHKNAEVKEAPKVEAQPQPKEEPFTAEQKEVIKKDIQTFLNNMFGA
MSMEVKADITFDDEENSVNVDLSGDNMGVLIGKRGQTLDSIQYLTSLVINKNSEKYVRVKLDTENYRKRRKETLESLAKN
IAYKVKRSRRPVSLEPMNPYERRIIHSALQADKFVSTRSEGEEPFRHVVVYLERENNNRYNR

Specific function: Unknown

COG id: COG1847

COG function: function code R; Predicted RNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 R3H domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001374 [H]

Pfam domain/function: PF01424 R3H [H]

EC number: NA

Molecular weight: Translated: 34784; Mature: 34784

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: PS50084 KH_TYPE_1 ; PS51061 R3H

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIEVTGKSVEEAITNACTKLGIPSDKLDYEIIEKGNSGFLGIFNSKPAKIKAREKQEE
CCEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEECCCCCEEECHHHCCC
PEVNSVETPKKSEAPVHAEKKFEKKADDFKKAEPKKEFKSEPKKEFKKEHKPADNHKNAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCC
VKEAPKVEAQPQPKEEPFTAEQKEVIKKDIQTFLNNMFGAMSMEVKADITFDDEENSVNV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCEEEE
DLSGDNMGVLIGKRGQTLDSIQYLTSLVINKNSEKYVRVKLDTENYRKRRKETLESLAKN
EECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
IAYKVKRSRRPVSLEPMNPYERRIIHSALQADKFVSTRSEGEEPFRHVVVYLERENNNRY
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCC
NR
CC
>Mature Secondary Structure
MEYIEVTGKSVEEAITNACTKLGIPSDKLDYEIIEKGNSGFLGIFNSKPAKIKAREKQEE
CCEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCEEEEECCCCCEEECHHHCCC
PEVNSVETPKKSEAPVHAEKKFEKKADDFKKAEPKKEFKSEPKKEFKKEHKPADNHKNAE
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHCCCCCCCCCCC
VKEAPKVEAQPQPKEEPFTAEQKEVIKKDIQTFLNNMFGAMSMEVKADITFDDEENSVNV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCEEEE
DLSGDNMGVLIGKRGQTLDSIQYLTSLVINKNSEKYVRVKLDTENYRKRRKETLESLAKN
EECCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHH
IAYKVKRSRRPVSLEPMNPYERRIIHSALQADKFVSTRSEGEEPFRHVVVYLERENNNRY
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCC
NR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10427704; 11058132 [H]