| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is metG [H]
Identifier: 238917941
GI number: 238917941
Start: 2098244
End: 2100217
Strand: Reverse
Name: metG [H]
Synonym: EUBELI_02029
Alternate gene names: 238917941
Gene position: 2100217-2098244 (Counterclockwise)
Preceding gene: 238917943
Following gene: 238917940
Centisome position: 97.95
GC content: 39.67
Gene sequence:
>1974_bases ATGCCACAGAGTAAAGGTCCATTTTATATGACAACAGCTATTGCCTATACATCAGGCAAGCCACATATCGGTAATACTTA TGAAATCGTTCTTGCAGACAGTATTGCAAGATTCAGAAGACAGGAAGGCTATGATGTATTTTTCCAGACAGGAACTGACG AGCATGGTCAGAAGATTGAGCTTAAGGCTGAAGAAGCTGGAATTACACCTAAGGAATTCGTTGATAATGTTTCAACAGAG ATTAAGAGAATATGGGATCTTATGAATACTTCATATGATAAGTTCATCAGAACAACAGATGATTACCATGAGAAGCAGGT TCAGAAGATTTTTAAGAAACTTTATGATCAGGGAGACATTTATAAGGGTTCATATGAAGGCATGTACTGTACTCCATGTG AGTCTTTCTGGACAGAGAGCCAGCTTGTTGATGGAAAGTGTCCTGATTGTGGACGTGAAGTTAAGCCAGCTAAGGAAGAA GCTTATTTCTTCAAGATGAGCAAATATGCCAACAAGCTTATTGAGCATATCAATACACATCCGGAATTCATCCAGCCTGT TTCAAGAAAGAATGAGATGATGAACAACTTCCTTCTTCCTGGACTTCAGGATTTATGTGTATCAAGAACATCTTTCAAAT GGGGTATTCCAGTTGACTTTGATGACAAGCATGTAGTTTATGTATGGCTTGATGCCCTTACTAACTATATCACAGGTATC GGATATGATGCTGATGGCAATTCTTCAGAGCAGTACAAGAAGTTCTGGCCAGCAGACCTTCACCTTATCGGTAAGGATAT CATCAGATTCCATACAATTTACTGGCCAATATTCCTTATGGCACTTGGTGAGCCACTTCCTAAGCAGGTGTTTGGACATC CTTGGTTATTACAGAATGATGGTAAGATGAGTAAGTCTAAGGGAAATGTTATCTATGCAGATGATCTTGTAGACCTTTTC GGCGTTGATGCTGTACGTTACTTTGTTCTTCACGAGATGCCATTTGAGAATGATGGTGTTATTTCATGGGAGCTTATGGT TGAGCGTATGAACTCAGACCTTGCCAACACACTTGGTAACCTTGTAAACAGAACAATTGCAATGTCTAACAAGTACTTTG GTGGAGTTGTTAATAAGACTGGCGTAGAGGATGCTGCAATTGACGGTGACCTTAAGGCTGTTGTAACAGCAACAAGAGAT AAGGTTCAGGCAAAGATGGCTACACTTCATGTAGCAGATGCTATCACAGAAGTATTCACACTCTTTAAGAGATGTAACAA ATATATTGACGAGACAATGCCTTGGGCTCTTGCAAAGGATGAGGCACAGCAGGACAGATTAGCAGAAGTGCTCTATAACC TTGTTGAGAGTATTACAATCGGTGCTAATCTTCTTAAGTCTTTCATGCCAGAGACTACAGATAAGATTCTTGCACAGCTT TACCCAGCTAATCCAGAGGCAGGAGTAAGAGATTTTGATGACCTTGCTACATTTGGCTTAAGAGAAACAGGACTTAAGGT TACTGAGACACCAGAGATTCTTTTCGCAAGACTTGACTTTGAGAAGGACCTTAAGGAAAAGGTTGATGCTATTCAGGAAG CTCAGAAGAAGGCTAATGGTGTTACAGAATATCCACAGGTTGAAGTTAAGCCTGAGATTACATTTGATGATTTTGAAAAG GTTCAGTTCAGAGTTGCCAAGGTTCTTACATGTGAAGCTGTTAAGAAGACAAAGCTTCTTAAGTTCGAGCTTCAGATTGG TGATGAGAAGAGAACTATCGTATCAGGTATCCAGAAGTACTATAAGCCAGAGGAGCTTATTGGTAAGAAGTTAGTTGTAT GTACTAATTTAAAACCAAGAAAGATCTGTGGTATTGAGTCACAGGGAATGATTATCTCAGCATGGGATGATAAGGATAAC TTATCAGTTCTTACACTTGAGAAAGATATTATTGAAGGTGCAGAGATTGGCTGA
Upstream 100 bases:
>100_bases TTATTGTAAATTTTTCTATGATAAAGTTTACGGATAAATGATTCACACTACATTTGCGTTATAGCGATGAATTAAAATAA TAGATTATGGAGGAAATGAT
Downstream 100 bases:
>100_bases TAGATATGAAGATATTTGAAACTCATGCTCATTATGATGATGAAAGATTTGATGAGGACAGAGATGAACTTATAAGCAGC ATGCTTAGTGATACAGGGGA
Product: methionyl-tRNA synthetase
Products: NA
Alternate protein names: Methionine--tRNA ligase; MetRS [H]
Number of amino acids: Translated: 657; Mature: 656
Protein sequence:
>657_residues MPQSKGPFYMTTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIELKAEEAGITPKEFVDNVSTE IKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGSYEGMYCTPCESFWTESQLVDGKCPDCGREVKPAKEE AYFFKMSKYANKLIEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITGI GYDADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQVFGHPWLLQNDGKMSKSKGNVIYADDLVDLF GVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGNLVNRTIAMSNKYFGGVVNKTGVEDAAIDGDLKAVVTATRD KVQAKMATLHVADAITEVFTLFKRCNKYIDETMPWALAKDEAQQDRLAEVLYNLVESITIGANLLKSFMPETTDKILAQL YPANPEAGVRDFDDLATFGLRETGLKVTETPEILFARLDFEKDLKEKVDAIQEAQKKANGVTEYPQVEVKPEITFDDFEK VQFRVAKVLTCEAVKKTKLLKFELQIGDEKRTIVSGIQKYYKPEELIGKKLVVCTNLKPRKICGIESQGMIISAWDDKDN LSVLTLEKDIIEGAEIG
Sequences:
>Translated_657_residues MPQSKGPFYMTTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIELKAEEAGITPKEFVDNVSTE IKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGSYEGMYCTPCESFWTESQLVDGKCPDCGREVKPAKEE AYFFKMSKYANKLIEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITGI GYDADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQVFGHPWLLQNDGKMSKSKGNVIYADDLVDLF GVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGNLVNRTIAMSNKYFGGVVNKTGVEDAAIDGDLKAVVTATRD KVQAKMATLHVADAITEVFTLFKRCNKYIDETMPWALAKDEAQQDRLAEVLYNLVESITIGANLLKSFMPETTDKILAQL YPANPEAGVRDFDDLATFGLRETGLKVTETPEILFARLDFEKDLKEKVDAIQEAQKKANGVTEYPQVEVKPEITFDDFEK VQFRVAKVLTCEAVKKTKLLKFELQIGDEKRTIVSGIQKYYKPEELIGKKLVVCTNLKPRKICGIESQGMIISAWDDKDN LSVLTLEKDIIEGAEIG >Mature_656_residues PQSKGPFYMTTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIELKAEEAGITPKEFVDNVSTEI KRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGSYEGMYCTPCESFWTESQLVDGKCPDCGREVKPAKEEA YFFKMSKYANKLIEHINTHPEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITGIG YDADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQVFGHPWLLQNDGKMSKSKGNVIYADDLVDLFG VDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGNLVNRTIAMSNKYFGGVVNKTGVEDAAIDGDLKAVVTATRDK VQAKMATLHVADAITEVFTLFKRCNKYIDETMPWALAKDEAQQDRLAEVLYNLVESITIGANLLKSFMPETTDKILAQLY PANPEAGVRDFDDLATFGLRETGLKVTETPEILFARLDFEKDLKEKVDAIQEAQKKANGVTEYPQVEVKPEITFDDFEKV QFRVAKVLTCEAVKKTKLLKFELQIGDEKRTIVSGIQKYYKPEELIGKKLVVCTNLKPRKICGIESQGMIISAWDDKDNL SVLTLEKDIIEGAEIG
Specific function: Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation [H]
COG id: COG0143
COG function: function code J; Methionyl-tRNA synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 tRNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI24308436, Length=549, Percent_Identity=33.5154826958106, Blast_Score=279, Evalue=6e-75, Organism=Homo sapiens, GI14043022, Length=534, Percent_Identity=28.6516853932584, Blast_Score=197, Evalue=2e-50, Organism=Escherichia coli, GI1788432, Length=698, Percent_Identity=27.0773638968481, Blast_Score=250, Evalue=2e-67, Organism=Escherichia coli, GI1786861, Length=194, Percent_Identity=25.7731958762887, Blast_Score=77, Evalue=5e-15, Organism=Caenorhabditis elegans, GI212645096, Length=493, Percent_Identity=32.8600405679513, Blast_Score=247, Evalue=2e-65, Organism=Caenorhabditis elegans, GI17540794, Length=606, Percent_Identity=27.3927392739274, Blast_Score=193, Evalue=2e-49, Organism=Caenorhabditis elegans, GI71992781, Length=383, Percent_Identity=31.0704960835509, Blast_Score=173, Evalue=3e-43, Organism=Caenorhabditis elegans, GI71997510, Length=182, Percent_Identity=27.4725274725275, Blast_Score=66, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71997517, Length=182, Percent_Identity=27.4725274725275, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6321610, Length=518, Percent_Identity=31.6602316602317, Blast_Score=257, Evalue=5e-69, Organism=Saccharomyces cerevisiae, GI6321704, Length=558, Percent_Identity=26.1648745519713, Blast_Score=171, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6323414, Length=179, Percent_Identity=30.1675977653631, Blast_Score=74, Evalue=6e-14, Organism=Drosophila melanogaster, GI21358483, Length=546, Percent_Identity=29.8534798534799, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI24655311, Length=622, Percent_Identity=27.8135048231511, Blast_Score=195, Evalue=9e-50,
Paralogues:
None
Copy number: 871 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015413 - InterPro: IPR004495 - InterPro: IPR014758 - InterPro: IPR012340 - InterPro: IPR016027 - InterPro: IPR014729 - InterPro: IPR002547 - InterPro: IPR009080 - InterPro: IPR013155 [H]
Pfam domain/function: PF08264 Anticodon_1; PF09334 tRNA-synt_1g; PF01588 tRNA_bind [H]
EC number: =6.1.1.10 [H]
Molecular weight: Translated: 74820; Mature: 74689
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS50886 TRBD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQSKGPFYMTTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIE CCCCCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCEEE LKAEEAGITPKEFVDNVSTEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDI EEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCE YKGSYEGMYCTPCESFWTESQLVDGKCPDCGREVKPAKEEAYFFKMSKYANKLIEHINTH ECCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITGI HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCC GYDADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQVFGHPWLLQND CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEECC GKMSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGN CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHH LVNRTIAMSNKYFGGVVNKTGVEDAAIDGDLKAVVTATRDKVQAKMATLHVADAITEVFT HHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFKRCNKYIDETMPWALAKDEAQQDRLAEVLYNLVESITIGANLLKSFMPETTDKILAQL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YPANPEAGVRDFDDLATFGLRETGLKVTETPEILFARLDFEKDLKEKVDAIQEAQKKANG CCCCCCCCCCCHHHHHHHCHHHCCCEEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHCC VTEYPQVEVKPEITFDDFEKVQFRVAKVLTCEAVKKTKLLKFELQIGDEKRTIVSGIQKY CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHH YKPEELIGKKLVVCTNLKPRKICGIESQGMIISAWDDKDNLSVLTLEKDIIEGAEIG CCCHHHHCCEEEEEECCCCHHCCCCCCCCEEEEECCCCCCCEEEEEEHHHHCCCCCC >Mature Secondary Structure PQSKGPFYMTTAIAYTSGKPHIGNTYEIVLADSIARFRRQEGYDVFFQTGTDEHGQKIE CCCCCCEEEEEEEEEECCCCCCCCEEEEEEHHHHHHHHHCCCCEEEEECCCCCCCCEEE LKAEEAGITPKEFVDNVSTEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDI EEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHCCCCCE YKGSYEGMYCTPCESFWTESQLVDGKCPDCGREVKPAKEEAYFFKMSKYANKLIEHINTH ECCCCCCEEECCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC PEFIQPVSRKNEMMNNFLLPGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITGI HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCC GYDADGNSSEQYKKFWPADLHLIGKDIIRFHTIYWPIFLMALGEPLPKQVFGHPWLLQND CCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEECC GKMSKSKGNVIYADDLVDLFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGN CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHH LVNRTIAMSNKYFGGVVNKTGVEDAAIDGDLKAVVTATRDKVQAKMATLHVADAITEVFT HHHHHHHHCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LFKRCNKYIDETMPWALAKDEAQQDRLAEVLYNLVESITIGANLLKSFMPETTDKILAQL HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH YPANPEAGVRDFDDLATFGLRETGLKVTETPEILFARLDFEKDLKEKVDAIQEAQKKANG CCCCCCCCCCCHHHHHHHCHHHCCCEEECCHHHEEEECCCHHHHHHHHHHHHHHHHHHCC VTEYPQVEVKPEITFDDFEKVQFRVAKVLTCEAVKKTKLLKFELQIGDEKRTIVSGIQKY CCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCHHHHHHHHHHH YKPEELIGKKLVVCTNLKPRKICGIESQGMIISAWDDKDNLSVLTLEKDIIEGAEIG CCCHHHHCCEEEEEECCCCHHCCCCCCCCEEEEECCCCCCCEEEEEEHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11792842 [H]