Click here to switch to the map view.

The map label for this gene is recR [H]

Identifier: 238917929

GI number: 238917929

Start: 2087552

End: 2088148

Strand: Reverse

Name: recR [H]

Synonym: EUBELI_02016

Alternate gene names: 238917929

Gene position: 2088148-2087552 (Counterclockwise)

Preceding gene: 238917930

Following gene: 238917928

Centisome position: 97.39

GC content: 42.88

Gene sequence:

>597_bases
ATGGACATCTACAGTGGTCATATTAACAGATTAATTGAAGAATTGTCGAGATTACCAGGGGTTGGGGCGAAGAGTGCCCA
GCGCCTGGCATTTCACATTATAAACATGCCTGAGTCTGAGGTTAAGAGCCTTGCAGACACAATGATTGATGCAAAGCAGC
ATATTCACTACTGTAAGGAGTGTTTTACACTTACAGATGAAGAACTGTGTCCGATATGCCGCGACCAGAAAAGAGACCAT
AAGACAATTATGGTAGTTGAACATACAAGAGATATGGCGGCATATGAAAAGACAGGAAAGTACGAGGGCGTATATCATGT
TCTTCATGGAGCAATAAGCCCGATGCTTGGAATCGGACCGGCTGATATCAGATTAAAGGAGCTTATGGTAAGGCTTCAGG
GAGATGTTGACGAGGTTATTATCGCAACTAATTCCAATCTGGAGGGTGAGACAACAGCAATGTACATAAGCAAAATGATA
AAGCCAACAGGAATTAAGGTGACAAGAATTGCAAGCGGAGTTCCTGTCGGCGGCGATCTTGAATATATCGATGAGGTTAC
ACTTTTAAGAGCATTAGACGGAAGAACCGAGCTTTAA

Upstream 100 bases:

>100_bases
CAGCTACTAATGAAGCTTTAAGAAAATGCGAAGAAGAGTCACAGGCACAGATGGCTAAGATTACTGGAGGACTTGGAGGA
TTAGGCGGAGGCTTATTCTA

Downstream 100 bases:

>100_bases
ATTTGGTGAAGAACCAAGCTTTAAGCTTAATGCCCTGGCGCACCGGGCGTTAAGACAATATGTGTAAAATGCGTGCGCAG
AAATGAAGAATACTATGGCA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDIYSGHINRLIEELSRLPGVGAKSAQRLAFHIINMPESEVKSLADTMIDAKQHIHYCKECFTLTDEELCPICRDQKRDH
KTIMVVEHTRDMAAYEKTGKYEGVYHVLHGAISPMLGIGPADIRLKELMVRLQGDVDEVIIATNSNLEGETTAMYISKMI
KPTGIKVTRIASGVPVGGDLEYIDEVTLLRALDGRTEL

Sequences:

>Translated_198_residues
MDIYSGHINRLIEELSRLPGVGAKSAQRLAFHIINMPESEVKSLADTMIDAKQHIHYCKECFTLTDEELCPICRDQKRDH
KTIMVVEHTRDMAAYEKTGKYEGVYHVLHGAISPMLGIGPADIRLKELMVRLQGDVDEVIIATNSNLEGETTAMYISKMI
KPTGIKVTRIASGVPVGGDLEYIDEVTLLRALDGRTEL
>Mature_198_residues
MDIYSGHINRLIEELSRLPGVGAKSAQRLAFHIINMPESEVKSLADTMIDAKQHIHYCKECFTLTDEELCPICRDQKRDH
KTIMVVEHTRDMAAYEKTGKYEGVYHVLHGAISPMLGIGPADIRLKELMVRLQGDVDEVIIATNSNLEGETTAMYISKMI
KPTGIKVTRIASGVPVGGDLEYIDEVTLLRALDGRTEL

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO [H]

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain [H]

Homologues:

Organism=Escherichia coli, GI1786678, Length=190, Percent_Identity=44.7368421052632, Blast_Score=156, Evalue=7e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967 [H]

Pfam domain/function: PF02132 RecR; PF01751 Toprim [H]

EC number: NA

Molecular weight: Translated: 22095; Mature: 22095

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIYSGHINRLIEELSRLPGVGAKSAQRLAFHIINMPESEVKSLADTMIDAKQHIHYCKE
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CFTLTDEELCPICRDQKRDHKTIMVVEHTRDMAAYEKTGKYEGVYHVLHGAISPMLGIGP
HHCCCCHHHCCHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
ADIRLKELMVRLQGDVDEVIIATNSNLEGETTAMYISKMIKPTGIKVTRIASGVPVGGDL
HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
EYIDEVTLLRALDGRTEL
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDIYSGHINRLIEELSRLPGVGAKSAQRLAFHIINMPESEVKSLADTMIDAKQHIHYCKE
CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
CFTLTDEELCPICRDQKRDHKTIMVVEHTRDMAAYEKTGKYEGVYHVLHGAISPMLGIGP
HHCCCCHHHCCHHHCCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
ADIRLKELMVRLQGDVDEVIIATNSNLEGETTAMYISKMIKPTGIKVTRIASGVPVGGDL
HHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCH
EYIDEVTLLRALDGRTEL
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA