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The map label for this gene is whiA

Identifier: 238917907

GI number: 238917907

Start: 2057187

End: 2058140

Strand: Reverse

Name: whiA

Synonym: EUBELI_01994

Alternate gene names: 238917907

Gene position: 2058140-2057187 (Counterclockwise)

Preceding gene: 238917908

Following gene: 238917906

Centisome position: 95.99

GC content: 39.41

Gene sequence:

>954_bases
ATGTCGTTTTCATCAGAAGTAAAAGAAGAGTTAGTTAAGAAAACAGATTCCGCGAGGCATTGCCAGATTGCGGAATTTGC
TGCGTTTATGGGAATGTCTGGCAATGTAAGCGAGACAGATAATGGAGAATTATGTCTGGAATTCGTTACAGAGAACGAAT
TGTCAGTTGAGAAATTCAGTGACCTGTTATTGAGAATATTTAGCATTAAGATGGATGCTGATACGAATGAAATGGTTAAG
AATGGCAAGGAAACTATTATAAGGATAACCAGACAGAGTGATGTTGCTAAGATATTGCAGACATTAAAATGGTGCGACGA
CCGGTTTACACAGATTGAACCGGTGTTTGTTGACGCAAGAATTGTAGCTATGGACTGCTGTAAGAAAGCATTTATAAGAG
GAGCTTTTATGGAACGAGGTTCTATAAGTGACCCCAACAAGTTCTATCACTATGAGATTGTGTGCAAATATGAGGAGGAC
GCTGATATTCTTATGGATATGCTGCGTTTTTTCGGACTCGATGCCAAGGTTATTGTAAGAAAAAACAGTTTTGTTGTGTA
TATGAAAGAAGGCAATAATATTACTGATACGCTTAATCTTATGGGAGCGGTTGTATCACAGATGAATCTTTACAATGTCA
TGATTCTTAAGGGAATCAGTAATGATGTCAACAGAAAGGTAAACTGTGAGACTGCTAATCTTAACAAGACAATTGAAGCG
GCGGTCAAGCAGATTAAGGATATTGAACTTATAAGAGATACTGTCGGGCTTGACAGTTTAAGTGACAGTCTGATGCAGGT
TGCTCTTTTAAGACTCGAGAATCCTGACATGAGTCTTCAGGGATTAGGTGAGCTGTTAGACCCTCAGGTTGGTAAATCGG
GTGTAAACCACAGGCTAAGAAAGATTGGCGAGAAGGCAGATGAATTAAGACAGAGCATGGGAATCTCTGTCTGA

Upstream 100 bases:

>100_bases
CTCTTGCTAATGAAATCTATAAGCTTATAAGCAGGACTGAGTATGGATGCAAGGTTGAGCATAGAGATATTGAGAAAGAT
TCTAAGAGAAAAGGTTAAGT

Downstream 100 bases:

>100_bases
TTAAATATTTTTAATAAAATTTTACATTTTCTTTTCAAATAGGGATTGACAAGAAGTGTATAATTGAAAATATGAGATAA
AAGAGCAGTCATATACTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSFSSEVKEELVKKTDSARHCQIAEFAAFMGMSGNVSETDNGELCLEFVTENELSVEKFSDLLLRIFSIKMDADTNEMVK
NGKETIIRITRQSDVAKILQTLKWCDDRFTQIEPVFVDARIVAMDCCKKAFIRGAFMERGSISDPNKFYHYEIVCKYEED
ADILMDMLRFFGLDAKVIVRKNSFVVYMKEGNNITDTLNLMGAVVSQMNLYNVMILKGISNDVNRKVNCETANLNKTIEA
AVKQIKDIELIRDTVGLDSLSDSLMQVALLRLENPDMSLQGLGELLDPQVGKSGVNHRLRKIGEKADELRQSMGISV

Sequences:

>Translated_317_residues
MSFSSEVKEELVKKTDSARHCQIAEFAAFMGMSGNVSETDNGELCLEFVTENELSVEKFSDLLLRIFSIKMDADTNEMVK
NGKETIIRITRQSDVAKILQTLKWCDDRFTQIEPVFVDARIVAMDCCKKAFIRGAFMERGSISDPNKFYHYEIVCKYEED
ADILMDMLRFFGLDAKVIVRKNSFVVYMKEGNNITDTLNLMGAVVSQMNLYNVMILKGISNDVNRKVNCETANLNKTIEA
AVKQIKDIELIRDTVGLDSLSDSLMQVALLRLENPDMSLQGLGELLDPQVGKSGVNHRLRKIGEKADELRQSMGISV
>Mature_316_residues
SFSSEVKEELVKKTDSARHCQIAEFAAFMGMSGNVSETDNGELCLEFVTENELSVEKFSDLLLRIFSIKMDADTNEMVKN
GKETIIRITRQSDVAKILQTLKWCDDRFTQIEPVFVDARIVAMDCCKKAFIRGAFMERGSISDPNKFYHYEIVCKYEEDA
DILMDMLRFFGLDAKVIVRKNSFVVYMKEGNNITDTLNLMGAVVSQMNLYNVMILKGISNDVNRKVNCETANLNKTIEAA
VKQIKDIELIRDTVGLDSLSDSLMQVALLRLENPDMSLQGLGELLDPQVGKSGVNHRLRKIGEKADELRQSMGISV

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_EUBE2 (C4Z4T8)

Other databases:

- EMBL:   CP001104
- RefSeq:   YP_002931424.1
- GeneID:   7957011
- GenomeReviews:   CP001104_GR
- KEGG:   eel:EUBELI_01994
- OMA:   MENSILA
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 35771; Mature: 35640

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFSSEVKEELVKKTDSARHCQIAEFAAFMGMSGNVSETDNGELCLEFVTENELSVEKFS
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
DLLLRIFSIKMDADTNEMVKNGKETIIRITRQSDVAKILQTLKWCDDRFTQIEPVFVDAR
HHHHHHHHHHCCCCHHHHHHCCHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECHH
IVAMDCCKKAFIRGAFMERGSISDPNKFYHYEIVCKYEEDADILMDMLRFFGLDAKVIVR
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEE
KNSFVVYMKEGNNITDTLNLMGAVVSQMNLYNVMILKGISNDVNRKVNCETANLNKTIEA
ECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECEECCCHHHHHH
AVKQIKDIELIRDTVGLDSLSDSLMQVALLRLENPDMSLQGLGELLDPQVGKSGVNHRLR
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHH
KIGEKADELRQSMGISV
HHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFSSEVKEELVKKTDSARHCQIAEFAAFMGMSGNVSETDNGELCLEFVTENELSVEKFS
CCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHH
DLLLRIFSIKMDADTNEMVKNGKETIIRITRQSDVAKILQTLKWCDDRFTQIEPVFVDAR
HHHHHHHHHHCCCCHHHHHHCCHHHEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECHH
IVAMDCCKKAFIRGAFMERGSISDPNKFYHYEIVCKYEEDADILMDMLRFFGLDAKVIVR
HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHCCCEEEEEE
KNSFVVYMKEGNNITDTLNLMGAVVSQMNLYNVMILKGISNDVNRKVNCETANLNKTIEA
ECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEECEECCCHHHHHH
AVKQIKDIELIRDTVGLDSLSDSLMQVALLRLENPDMSLQGLGELLDPQVGKSGVNHRLR
HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHH
KIGEKADELRQSMGISV
HHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA