Click here to switch to the map view.

The map label for this gene is yybT [H]

Identifier: 238917871

GI number: 238917871

Start: 2017237

End: 2019315

Strand: Reverse

Name: yybT [H]

Synonym: EUBELI_01952

Alternate gene names: 238917871

Gene position: 2019315-2017237 (Counterclockwise)

Preceding gene: 238917872

Following gene: 238917870

Centisome position: 94.18

GC content: 37.42

Gene sequence:

>2079_bases
ATGGAGATGGGTATTATGCCAGATAATAAAAATGGGAAAAAAGCATTTAAATATAGTGGACTTTTAAGGTCTTTTTTTGC
ATGGCCTTTGTATATTGGTGCAATTCTGATTATAATATGTACTGTTATGTTCTGCATTAATGTTATGGCAGCAACAATTA
TAAGTATTTTTATGGTTATATATCTGCTGGCGTGCGGATTGATGTATTTCTACTTAAGACCAAGAATAATGTATGGAATG
GTTGAATTTGCAGCCAATTATTCTCAGGTTCAGAAGCAGCTTTTATATAATCTGAGTGTGCCATACTGCCTTTTGGATAA
TAATGGAAATGTTATGTGGACTAATAAGGCAATGCAGGACTGCATAGGAATTAAGAAGGATTTCAGAAAGAATATCAATA
CTGTTCTTCCAGAAGTTACACCAAGTATATTTCCAGATAGTGAGATTGGATTTAAGGAGATACGACTTACATTTCAGGAC
AGGGATTATAAGGCTGAATTAAAGAATATTGACGCAGATTCTATAGCAGAGGGTGTTGATATAATAGAGAAAAGCATGGA
TTCTTCAATGTATGTAATGTATCTTTTTGATGAGACTGATATTAATACATATATACAGAAGTTAAAGGATGAAAGATTCG
TTGTGGGACTTGTGTATATAGATAATTATGAGGAAGCCCTTGATAGTACTGACGATGTAAGAAGGTCGCTTCTTGCAGGT
CTTATTGATAAGAGGGTTAATAAGTATTTTTCTCCGGGTTCAGCAATTGTAAGAAAACTGGAGAAGGATAAATATATTGT
TGTTTTCAGATATAATTTCTTAGAGAAGCTTATGCAGGACAGATTCAGCCTGCTTGAAGAGATTAAGAGCATTAAGATTG
GTAATGAGATGACTCTTACACTCAGCATGGGTATAGGAACGGGTTCGGCAGAGTATTCTAAGAATTATGATGTGGCTAAG
GCAGCGATGGATCTTGCTCTTGGACGAGGAGGAGACCAGGCGGTAGTCAAGGATGGTGAGAAGATTCTTTATTATGGTGG
CAAGAGTCAGCAGATGGAGAAGAATACAAGAGTTAAGGTGCGTGTTAAAGCTCATGCATTAAGACAGATTCTTGATAATA
ACAGTAATGTGCTTGTTATGGGACATACACTTGCGGATATTGATGCATTTGGTTCAGCTCTGGGTATATATGTTATTGCT
AAGAAGCTTGGCAAGGAGGCACATATTGTTCTTGGAGAGGTTACAAGCAGCGTACGGCCTTTTGTGAACAGATTCATAGG
CAAGGAAGAGTATCCGGATGATATGTTTATAAAGCCAGAGGATGCGTCTTCCAGAATAAATGCATCAACAGTAGTTATTG
TTGTTGATGTTAACAGACCACAGAGAACAGAGTGTCCAGAGCTTCTTGAAAAATGCAAGACAGTTGTTGTATTTGATCAC
CACAGAAGACAGAGTGACACAATAACAGGAGCAGTTCTTTCGTATGTCGACCCATATGCGTCATCTGCCAGTGAGATGAT
TACAGAGATGATACAGTATGTTGATGACAATATTAAGCTTAAAGCATTTGAGGCAGATGCACTTTATGCCGGAATTAATA
TTGATACTGACGGATTTAACAGTAAGTCAGGACCAAGAACTTTTGAGGCAGCAGCATTCTTAAGAAGACATGGTGCAGAT
GTAACAAGAGTAAGAAAAATGCTTCGAAGTAATATGAATGAATATAAGGAGATTGCAAAGGCTGTAAGCCGTGTGGAGAT
TTATAAGGACGCATTTGCAATATCAATATTTAATGGCGATGGAATTGACACACCAACTGTTGGCGGTGCCAAGACAGCCA
ATGATTTGCTTGATATATCTGGAATCAAGGCGTCTTTTGTTATCACTCCTTACGAGGATAAGATATATGTGAGTGCAAGG
TCTATAGATGAGGTTAATGTACAGCTTGTTATGGAAAAGCTGGGCGGAGGTGGTCATATGAGTATTGCAGGAGCTCAGCT
TACAGATTGTACAATTGATCAGGCAGTTAATAAAATTAAGCTTACACTTGATAATATGATTAAGGATGGTGAAATTTAA

Upstream 100 bases:

>100_bases
TATGCTGCCCGCAGCAGTGAGCCGTGCAATCCAGAATGTGCTTGCACAAAGTATGCTTGTAGTATATTTGTATACATGAT
ATAATTATTCTAATTCGATT

Downstream 100 bases:

>100_bases
TGGATGTTATTTTATTAGAGGATGTTAAGACATTAGGAAAAAAGGGACAGATTGTTAAGATTAATGACGGTTATGCAAGA
AATTATGTGCTTCCAAAGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 692; Mature: 692

Protein sequence:

>692_residues
MEMGIMPDNKNGKKAFKYSGLLRSFFAWPLYIGAILIIICTVMFCINVMAATIISIFMVIYLLACGLMYFYLRPRIMYGM
VEFAANYSQVQKQLLYNLSVPYCLLDNNGNVMWTNKAMQDCIGIKKDFRKNINTVLPEVTPSIFPDSEIGFKEIRLTFQD
RDYKAELKNIDADSIAEGVDIIEKSMDSSMYVMYLFDETDINTYIQKLKDERFVVGLVYIDNYEEALDSTDDVRRSLLAG
LIDKRVNKYFSPGSAIVRKLEKDKYIVVFRYNFLEKLMQDRFSLLEEIKSIKIGNEMTLTLSMGIGTGSAEYSKNYDVAK
AAMDLALGRGGDQAVVKDGEKILYYGGKSQQMEKNTRVKVRVKAHALRQILDNNSNVLVMGHTLADIDAFGSALGIYVIA
KKLGKEAHIVLGEVTSSVRPFVNRFIGKEEYPDDMFIKPEDASSRINASTVVIVVDVNRPQRTECPELLEKCKTVVVFDH
HRRQSDTITGAVLSYVDPYASSASEMITEMIQYVDDNIKLKAFEADALYAGINIDTDGFNSKSGPRTFEAAAFLRRHGAD
VTRVRKMLRSNMNEYKEIAKAVSRVEIYKDAFAISIFNGDGIDTPTVGGAKTANDLLDISGIKASFVITPYEDKIYVSAR
SIDEVNVQLVMEKLGGGGHMSIAGAQLTDCTIDQAVNKIKLTLDNMIKDGEI

Sequences:

>Translated_692_residues
MEMGIMPDNKNGKKAFKYSGLLRSFFAWPLYIGAILIIICTVMFCINVMAATIISIFMVIYLLACGLMYFYLRPRIMYGM
VEFAANYSQVQKQLLYNLSVPYCLLDNNGNVMWTNKAMQDCIGIKKDFRKNINTVLPEVTPSIFPDSEIGFKEIRLTFQD
RDYKAELKNIDADSIAEGVDIIEKSMDSSMYVMYLFDETDINTYIQKLKDERFVVGLVYIDNYEEALDSTDDVRRSLLAG
LIDKRVNKYFSPGSAIVRKLEKDKYIVVFRYNFLEKLMQDRFSLLEEIKSIKIGNEMTLTLSMGIGTGSAEYSKNYDVAK
AAMDLALGRGGDQAVVKDGEKILYYGGKSQQMEKNTRVKVRVKAHALRQILDNNSNVLVMGHTLADIDAFGSALGIYVIA
KKLGKEAHIVLGEVTSSVRPFVNRFIGKEEYPDDMFIKPEDASSRINASTVVIVVDVNRPQRTECPELLEKCKTVVVFDH
HRRQSDTITGAVLSYVDPYASSASEMITEMIQYVDDNIKLKAFEADALYAGINIDTDGFNSKSGPRTFEAAAFLRRHGAD
VTRVRKMLRSNMNEYKEIAKAVSRVEIYKDAFAISIFNGDGIDTPTVGGAKTANDLLDISGIKASFVITPYEDKIYVSAR
SIDEVNVQLVMEKLGGGGHMSIAGAQLTDCTIDQAVNKIKLTLDNMIKDGEI
>Mature_692_residues
MEMGIMPDNKNGKKAFKYSGLLRSFFAWPLYIGAILIIICTVMFCINVMAATIISIFMVIYLLACGLMYFYLRPRIMYGM
VEFAANYSQVQKQLLYNLSVPYCLLDNNGNVMWTNKAMQDCIGIKKDFRKNINTVLPEVTPSIFPDSEIGFKEIRLTFQD
RDYKAELKNIDADSIAEGVDIIEKSMDSSMYVMYLFDETDINTYIQKLKDERFVVGLVYIDNYEEALDSTDDVRRSLLAG
LIDKRVNKYFSPGSAIVRKLEKDKYIVVFRYNFLEKLMQDRFSLLEEIKSIKIGNEMTLTLSMGIGTGSAEYSKNYDVAK
AAMDLALGRGGDQAVVKDGEKILYYGGKSQQMEKNTRVKVRVKAHALRQILDNNSNVLVMGHTLADIDAFGSALGIYVIA
KKLGKEAHIVLGEVTSSVRPFVNRFIGKEEYPDDMFIKPEDASSRINASTVVIVVDVNRPQRTECPELLEKCKTVVVFDH
HRRQSDTITGAVLSYVDPYASSASEMITEMIQYVDDNIKLKAFEADALYAGINIDTDGFNSKSGPRTFEAAAFLRRHGAD
VTRVRKMLRSNMNEYKEIAKAVSRVEIYKDAFAISIFNGDGIDTPTVGGAKTANDLLDISGIKASFVITPYEDKIYVSAR
SIDEVNVQLVMEKLGGGGHMSIAGAQLTDCTIDQAVNKIKLTLDNMIKDGEI

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 77581; Mature: 77581

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEMGIMPDNKNGKKAFKYSGLLRSFFAWPLYIGAILIIICTVMFCINVMAATIISIFMVI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLACGLMYFYLRPRIMYGMVEFAANYSQVQKQLLYNLSVPYCLLDNNGNVMWTNKAMQD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCEEECCHHHHH
CIGIKKDFRKNINTVLPEVTPSIFPDSEIGFKEIRLTFQDRDYKAELKNIDADSIAEGVD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEECCCCHHHHHHCCCHHHHHHHHH
IIEKSMDSSMYVMYLFDETDINTYIQKLKDERFVVGLVYIDNYEEALDSTDDVRRSLLAG
HHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEEECCHHHHHCCHHHHHHHHHHH
LIDKRVNKYFSPGSAIVRKLEKDKYIVVFRYNFLEKLMQDRFSLLEEIKSIKIGNEMTLT
HHHHHHHHHCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LSMGIGTGSAEYSKNYDVAKAAMDLALGRGGDQAVVKDGEKILYYGGKSQQMEKNTRVKV
EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCEEE
RVKAHALRQILDNNSNVLVMGHTLADIDAFGSALGIYVIAKKLGKEAHIVLGEVTSSVRP
EEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH
FVNRFIGKEEYPDDMFIKPEDASSRINASTVVIVVDVNRPQRTECPELLEKCKTVVVFDH
HHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEEEC
HRRQSDTITGAVLSYVDPYASSASEMITEMIQYVDDNIKLKAFEADALYAGINIDTDGFN
CCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEECEECCCCCC
SKSGPRTFEAAAFLRRHGADVTRVRKMLRSNMNEYKEIAKAVSRVEIYKDAFAISIFNGD
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCEEEEEEECCC
GIDTPTVGGAKTANDLLDISGIKASFVITPYEDKIYVSARSIDEVNVQLVMEKLGGGGHM
CCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCE
SIAGAQLTDCTIDQAVNKIKLTLDNMIKDGEI
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEMGIMPDNKNGKKAFKYSGLLRSFFAWPLYIGAILIIICTVMFCINVMAATIISIFMVI
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLLACGLMYFYLRPRIMYGMVEFAANYSQVQKQLLYNLSVPYCLLDNNGNVMWTNKAMQD
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCEEECCHHHHH
CIGIKKDFRKNINTVLPEVTPSIFPDSEIGFKEIRLTFQDRDYKAELKNIDADSIAEGVD
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEECCCCHHHHHHCCCHHHHHHHHH
IIEKSMDSSMYVMYLFDETDINTYIQKLKDERFVVGLVYIDNYEEALDSTDDVRRSLLAG
HHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEEEECCHHHHHCCHHHHHHHHHHH
LIDKRVNKYFSPGSAIVRKLEKDKYIVVFRYNFLEKLMQDRFSLLEEIKSIKIGNEMTLT
HHHHHHHHHCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LSMGIGTGSAEYSKNYDVAKAAMDLALGRGGDQAVVKDGEKILYYGGKSQQMEKNTRVKV
EEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCEEEEECCCCCCCCCCCCEEE
RVKAHALRQILDNNSNVLVMGHTLADIDAFGSALGIYVIAKKLGKEAHIVLGEVTSSVRP
EEHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHH
FVNRFIGKEEYPDDMFIKPEDASSRINASTVVIVVDVNRPQRTECPELLEKCKTVVVFDH
HHHHHCCCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHCCEEEEEEC
HRRQSDTITGAVLSYVDPYASSASEMITEMIQYVDDNIKLKAFEADALYAGINIDTDGFN
CCCCCCHHHHHHHHHHCHHCCCHHHHHHHHHHHCCCCCEEEEEECCEEEEECEECCCCCC
SKSGPRTFEAAAFLRRHGADVTRVRKMLRSNMNEYKEIAKAVSRVEIYKDAFAISIFNGD
CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCEEEEEEECCC
GIDTPTVGGAKTANDLLDISGIKASFVITPYEDKIYVSARSIDEVNVQLVMEKLGGGGHM
CCCCCCCCCCCCHHHHHHCCCCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCE
SIAGAQLTDCTIDQAVNKIKLTLDNMIKDGEI
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]