Click here to switch to the map view.

The map label for this gene is atpB [H]

Identifier: 238917853

GI number: 238917853

Start: 2004076

End: 2004798

Strand: Reverse

Name: atpB [H]

Synonym: EUBELI_01934

Alternate gene names: 238917853

Gene position: 2004798-2004076 (Counterclockwise)

Preceding gene: 238917854

Following gene: 238917852

Centisome position: 93.5

GC content: 38.31

Gene sequence:

>723_bases
GTGGGAAGCGAGAGTTTGACTGCGATGGTGGCCGGAGATTCAAGTTTCATGATTAAGACGCTGTACACATTTAAGCTGAA
TGGCGTTTCATTGAACATTGACACAACACATGTGGCTCTGCTGCTGGTATCAGTCTTTATTCTTGTTATGGCTGTAATAG
CAAGGATTAAGATTAATAAAGTCGATGCTTCAGATACACCGGGAATGTTCCAGAATGCCATAGAAATCATCGTTGAGATG
TTAGGCACTATGGTTGATGGTATTATGGGTAAGAATGCCAACAAGTTTGTGAATTATATATCCACATTATTCTTGTTTAT
AATAATATCTAACATATCCGGTCTGTTTGGGTTAAGACCACCAACGGCTGATTATGGTGTTACTCTGTGTCTTGGTCTGA
TAACATTTATACTGGTTCAGTTCAATGGTATCAAGAAGAACAGGATTAAGCACTTTACAGCATTATTCCAACCGATATGG
TTTTTATTCCCGATTAACCTTATTGGTGAATTTGCAGTTCCGTTATCATTATCATTACGTCTTTTCGGTAATGTAATGTC
AGGAACAGTTCTTATGGGATTGATATATGATTTGCTCAGTCCATTTACAGTTGCATACCCGGCAGTTCTGCATGCGTACT
TTGATTTATTCTCAGGCTGCATTCAGGCGTATGTATTCTGCATGTTAACTATGGTTTATGTTAACGACAAGATAGCCGAT
TAA

Upstream 100 bases:

>100_bases
GTCGCCTTTACTGGACAAGAACAGGTCCACAAAAGGGGAAAACAGTACTGGGGAGTTTCCGCAGACTGATAAAAATATAA
TAGAAAAGGAGAGTGAGTAG

Downstream 100 bases:

>100_bases
CGGCAAATATTTTTATTAGACGGAGGATTTTTAAATGAATATTTCAGGAAGTGAATTTATTAGTGCTATGTCAGCAATTG
GAGCAGGTATTGCGATGATC

Product: ATP synthase

Products: ADP; phosphate

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MGSESLTAMVAGDSSFMIKTLYTFKLNGVSLNIDTTHVALLLVSVFILVMAVIARIKINKVDASDTPGMFQNAIEIIVEM
LGTMVDGIMGKNANKFVNYISTLFLFIIISNISGLFGLRPPTADYGVTLCLGLITFILVQFNGIKKNRIKHFTALFQPIW
FLFPINLIGEFAVPLSLSLRLFGNVMSGTVLMGLIYDLLSPFTVAYPAVLHAYFDLFSGCIQAYVFCMLTMVYVNDKIAD

Sequences:

>Translated_240_residues
MGSESLTAMVAGDSSFMIKTLYTFKLNGVSLNIDTTHVALLLVSVFILVMAVIARIKINKVDASDTPGMFQNAIEIIVEM
LGTMVDGIMGKNANKFVNYISTLFLFIIISNISGLFGLRPPTADYGVTLCLGLITFILVQFNGIKKNRIKHFTALFQPIW
FLFPINLIGEFAVPLSLSLRLFGNVMSGTVLMGLIYDLLSPFTVAYPAVLHAYFDLFSGCIQAYVFCMLTMVYVNDKIAD
>Mature_239_residues
GSESLTAMVAGDSSFMIKTLYTFKLNGVSLNIDTTHVALLLVSVFILVMAVIARIKINKVDASDTPGMFQNAIEIIVEML
GTMVDGIMGKNANKFVNYISTLFLFIIISNISGLFGLRPPTADYGVTLCLGLITFILVQFNGIKKNRIKHFTALFQPIWF
LFPINLIGEFAVPLSLSLRLFGNVMSGTVLMGLIYDLLSPFTVAYPAVLHAYFDLFSGCIQAYVFCMLTMVYVNDKIAD

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

Organism=Escherichia coli, GI1790176, Length=206, Percent_Identity=33.495145631068, Blast_Score=77, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.15

Molecular weight: Translated: 26444; Mature: 26313

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSESLTAMVAGDSSFMIKTLYTFKLNGVSLNIDTTHVALLLVSVFILVMAVIARIKINK
CCCCCEEEEEECCCHHHHHHHHEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
VDASDTPGMFQNAIEIIVEMLGTMVDGIMGKNANKFVNYISTLFLFIIISNISGLFGLRP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTADYGVTLCLGLITFILVQFNGIKKNRIKHFTALFQPIWFLFPINLIGEFAVPLSLSLR
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGNVMSGTVLMGLIYDLLSPFTVAYPAVLHAYFDLFSGCIQAYVFCMLTMVYVNDKIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GSESLTAMVAGDSSFMIKTLYTFKLNGVSLNIDTTHVALLLVSVFILVMAVIARIKINK
CCCCEEEEEECCCHHHHHHHHEEEECCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCC
VDASDTPGMFQNAIEIIVEMLGTMVDGIMGKNANKFVNYISTLFLFIIISNISGLFGLRP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PTADYGVTLCLGLITFILVQFNGIKKNRIKHFTALFQPIWFLFPINLIGEFAVPLSLSLR
CCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFGNVMSGTVLMGLIYDLLSPFTVAYPAVLHAYFDLFSGCIQAYVFCMLTMVYVNDKIAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O

Specific reaction: ATP + H2O = ADP + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2174545; 1386022; 2170948; 1533602 [H]