Click here to switch to the map view.

The map label for this gene is 238917716

Identifier: 238917716

GI number: 238917716

Start: 1856313

End: 1857473

Strand: Direct

Name: 238917716

Synonym: EUBELI_01796

Alternate gene names: NA

Gene position: 1856313-1857473 (Clockwise)

Preceding gene: 238917703

Following gene: 238917725

Centisome position: 86.57

GC content: 35.83

Gene sequence:

>1161_bases
ATGTACAGACAAATCATTGATACATTAAACCAATTTCTAAATTACATACATATCCCTGGCACACCACTTAATCCAGATGC
TTTTCAAGGAATATTGGTAAAGAAACTTTCAAACCAGAATATTATAAAAGATAAGCGAAGAATTAATGCCGGGGATACTT
CTTCAACGGTAAACCAGACACATATTGATGTTACTGGTAAACAAGGCATGTTATTTTTCTTTGAAGAACTGAATAATGCA
ACAACCTCCGTACAAAGCATTGATATTGATATATACGATAACAATTTCAGATACCTTCATGAAATCGACCAGCCCTCTGC
CAGGATGGATTTAAACGGAAACACTTACTATGTACGTTCCAATATCAATCTGCCACAATACTTAACAGATTTCAATTTTG
CTCTTCACAGTTCTGCATATAAAAAATATGGTCATACTGGTGACCAGGTACAAATAAACATCCCAGATTCTGAAGAGGCT
TTTACCCAGCTTCAGAGATTTGCATTCCAGGATGATGCTCTTGTTATGCTAAGATATGATTACTTGAGATATGTTGCTAT
TCTCATTCCGTGTGAATTATGTAACAACCTGTACTCTATTACAAACACACATGGTACCCATAATGTAAATTATGTAGCAA
TGAATCCTTCATATAACCCAGTATTAGCACATCAGATCCAGTATAATATTATTTCAAATGATGTAAGTTGCGATGATGTT
GAAGCCATGACTTTGCAACGCACTCTAAATAATAACCCATGTGCCGGTACAGATGTTGAAAAGATTGTAAAAACCCGTGT
TTCGCAAGGCTCTTTCCGCAGACTGTTACTTCTTGAACGCCATCACTGTAATCTTTGCGATATTTCCACCACATCTGTAT
TACGCGCAAGCCATATTAAAGAATGGGCTGAATCCTCCAAAGAAGAACGTATAGATGCAAACAATGGTTTGCTTTTATGC
GCTAATCACGATGCCCTATTCGACAGACATCTAATATCTTTTGAACCTAATACAGGAAATATCTGCATTTCAGCATCAAT
TGACGATGATCAGCGAAATGCCTTAAATCTTTCTAAATCCGCCAGAATTTCTATGAATGATCGAATGAAGGCATACATGC
AGATACACTACAAAAAATTTATTGAAAAAGAAAATCAGTAA

Upstream 100 bases:

>100_bases
TTTATCAGGGTGTAAATACATTCTTTATTAAAATTTATATATACACTTTCTTTTCTGCTTGATATAATAAATATAAATCT
ACAGAAGGGAATACAATTAC

Downstream 100 bases:

>100_bases
TTTTCCAATTGCGAGATGTACCTACATACATCTCGCAATGTTTTATCTCCGCATATCCCATATCTTGTCTTTTGCTTTTT
CTGTATTAGTATCTCTACTA

Product: restriction endonuclease

Products: NA

Alternate protein names: Type II Restriction HphI; Restriction Endonuclease-Like Protein

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MYRQIIDTLNQFLNYIHIPGTPLNPDAFQGILVKKLSNQNIIKDKRRINAGDTSSTVNQTHIDVTGKQGMLFFFEELNNA
TTSVQSIDIDIYDNNFRYLHEIDQPSARMDLNGNTYYVRSNINLPQYLTDFNFALHSSAYKKYGHTGDQVQINIPDSEEA
FTQLQRFAFQDDALVMLRYDYLRYVAILIPCELCNNLYSITNTHGTHNVNYVAMNPSYNPVLAHQIQYNIISNDVSCDDV
EAMTLQRTLNNNPCAGTDVEKIVKTRVSQGSFRRLLLLERHHCNLCDISTTSVLRASHIKEWAESSKEERIDANNGLLLC
ANHDALFDRHLISFEPNTGNICISASIDDDQRNALNLSKSARISMNDRMKAYMQIHYKKFIEKENQ

Sequences:

>Translated_386_residues
MYRQIIDTLNQFLNYIHIPGTPLNPDAFQGILVKKLSNQNIIKDKRRINAGDTSSTVNQTHIDVTGKQGMLFFFEELNNA
TTSVQSIDIDIYDNNFRYLHEIDQPSARMDLNGNTYYVRSNINLPQYLTDFNFALHSSAYKKYGHTGDQVQINIPDSEEA
FTQLQRFAFQDDALVMLRYDYLRYVAILIPCELCNNLYSITNTHGTHNVNYVAMNPSYNPVLAHQIQYNIISNDVSCDDV
EAMTLQRTLNNNPCAGTDVEKIVKTRVSQGSFRRLLLLERHHCNLCDISTTSVLRASHIKEWAESSKEERIDANNGLLLC
ANHDALFDRHLISFEPNTGNICISASIDDDQRNALNLSKSARISMNDRMKAYMQIHYKKFIEKENQ
>Mature_386_residues
MYRQIIDTLNQFLNYIHIPGTPLNPDAFQGILVKKLSNQNIIKDKRRINAGDTSSTVNQTHIDVTGKQGMLFFFEELNNA
TTSVQSIDIDIYDNNFRYLHEIDQPSARMDLNGNTYYVRSNINLPQYLTDFNFALHSSAYKKYGHTGDQVQINIPDSEEA
FTQLQRFAFQDDALVMLRYDYLRYVAILIPCELCNNLYSITNTHGTHNVNYVAMNPSYNPVLAHQIQYNIISNDVSCDDV
EAMTLQRTLNNNPCAGTDVEKIVKTRVSQGSFRRLLLLERHHCNLCDISTTSVLRASHIKEWAESSKEERIDANNGLLLC
ANHDALFDRHLISFEPNTGNICISASIDDDQRNALNLSKSARISMNDRMKAYMQIHYKKFIEKENQ

Specific function: Unknown

COG id: COG3440

COG function: function code V; Predicted restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44279; Mature: 44279

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRQIIDTLNQFLNYIHIPGTPLNPDAFQGILVKKLSNQNIIKDKRRINAGDTSSTVNQT
CHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEE
HIDVTGKQGMLFFFEELNNATTSVQSIDIDIYDNNFRYLHEIDQPSARMDLNGNTYYVRS
EEEEECCCCEEEEEEHHCCHHCEEEEEEEEEEECCCEEEEECCCCCCEEECCCCEEEEEE
NINLPQYLTDFNFALHSSAYKKYGHTGDQVQINIPDSEEAFTQLQRFAFQDDALVMLRYD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEHH
YLRYVAILIPCELCNNLYSITNTHGTHNVNYVAMNPSYNPVLAHQIQYNIISNDVSCDDV
HHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCH
EAMTLQRTLNNNPCAGTDVEKIVKTRVSQGSFRRLLLLERHHCNLCDISTTSVLRASHIK
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHEEEEECCCCCCEECCCHHHHHHHHHHH
EWAESSKEERIDANNGLLLCANHDALFDRHLISFEPNTGNICISASIDDDQRNALNLSKS
HHHHCCHHHCCCCCCCEEEEECCCHHHHCEEEEECCCCCCEEEEECCCCCCHHHCCCCCC
ARISMNDRMKAYMQIHYKKFIEKENQ
CEECHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYRQIIDTLNQFLNYIHIPGTPLNPDAFQGILVKKLSNQNIIKDKRRINAGDTSSTVNQT
CHHHHHHHHHHHHCEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCEE
HIDVTGKQGMLFFFEELNNATTSVQSIDIDIYDNNFRYLHEIDQPSARMDLNGNTYYVRS
EEEEECCCCEEEEEEHHCCHHCEEEEEEEEEEECCCEEEEECCCCCCEEECCCCEEEEEE
NINLPQYLTDFNFALHSSAYKKYGHTGDQVQINIPDSEEAFTQLQRFAFQDDALVMLRYD
CCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEHH
YLRYVAILIPCELCNNLYSITNTHGTHNVNYVAMNPSYNPVLAHQIQYNIISNDVSCDDV
HHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEEEECCCCCCEEEEEEEEEEECCCCCCCCH
EAMTLQRTLNNNPCAGTDVEKIVKTRVSQGSFRRLLLLERHHCNLCDISTTSVLRASHIK
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHEEEEECCCCCCEECCCHHHHHHHHHHH
EWAESSKEERIDANNGLLLCANHDALFDRHLISFEPNTGNICISASIDDDQRNALNLSKS
HHHHCCHHHCCCCCCCEEEEECCCHHHHCEEEEECCCCCCEEEEECCCCCCHHHCCCCCC
ARISMNDRMKAYMQIHYKKFIEKENQ
CEECHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA