| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is pdxK [C]
Identifier: 238917280
GI number: 238917280
Start: 1391629
End: 1392501
Strand: Reverse
Name: pdxK [C]
Synonym: EUBELI_01355
Alternate gene names: 238917280
Gene position: 1392501-1391629 (Counterclockwise)
Preceding gene: 238917281
Following gene: 238917279
Centisome position: 64.94
GC content: 36.88
Gene sequence:
>873_bases ATGCCACATTTAGACGAAAGGAGAGACAATATGCCAGAGAATAATGTGTCTCATAATAACCAGAAGAAAATAGCAGCAAT TAATGATTATTCTGGTTTTGGAAGATGTTCTATTGCAGTTGAACTGCCTGTTATATCAGCAATGAAAATTCAGTGCTGTC CAATGCCTACATCGATATTTTCTAATCATACAGGCTTTGACAGCTTTTATTTTAAAGATTTCACAGAGAATATGCCACCT TATATGGCAGAGTGGAAGAAGTTAAACCTTAAATTTGATGGAATTGTAACAGGATTCTTGGGTTCACATAATCAGATTGC TATTGTTGAAGAATTTTTCAAGAATTTCAAGACGGAAGATAATATTGTTGTTATCGACCCGGTTATGGGGGATTACGGAA ATCTGTATCCGACATATACTGATGAGACATGCCAGGAGATGAAGAAGCTTGTAAAATATGCAGATATTCTTACACCGAAC CTCACAGAAGCATGTATTTTAACTGACGAGCCATACAGACCGGATTATTCCAATGATGAGCTTAAAAAAATTGCAATGAA GCTTGTTGCAATGGGACCATCTAAGATTGTTATTACAGGAATCCAGCGGGGCCATTATATTGGTAATTACTGTTATGAAA AGAACAGGGAAGACTATCTTATTAAGACTATGAAGGTTGGAACACAGCGTTCCGGAACAGGAGATATATTTGCATCTATA ATAGCTGCAGATGCTGTAAATGGTGTGAATTTCCATGAGTCAGTAAGAAAAGCATCTACATTTATAAAAAAATGCATACT CAAGGCTATAGAGATGGATATTCCTCTGACAGACGGTGTGCCGTTTGAGGAACTGCTGACTACGTTGAAGTAA
Upstream 100 bases:
>100_bases TTATCATATGCCAGTTTTTTGTATATTAAAAGATAAAGATTTTATGTGTGGACTGCAGTCAGATTATGGCAGAATTGTCA TATAACAGGCTGTCAGGTTT
Downstream 100 bases:
>100_bases GTGGTTGGAGTGTGGGAATATGTGTCATGTGAGCTGATGTGTCGTAGCTTTTCGCAAACTACGGTGCTGGCGGCGTGGCG GATTGGACGTTGAAGCGGTG
Product: pyridoxine kinase
Products: ADP; pyridoxal 5'-phosphate
Alternate protein names: Pyridoxamine Kinase; Pyridoxine Kinase; Pyridoxal/Pyridoxine/Pyridoxamine Kinase; Phosphomethylpyrimidine Kinase; Pyridoxine Kinase Family Protein; Pyridoxal Kinase-Like Protein; Pyridoxal Kinase Related Protein; Pyridoxal/Pyridoxine/Pyridoxamine Kinase-Like Protein; Pyridoxamine Kinase PdxY
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MPHLDERRDNMPENNVSHNNQKKIAAINDYSGFGRCSIAVELPVISAMKIQCCPMPTSIFSNHTGFDSFYFKDFTENMPP YMAEWKKLNLKFDGIVTGFLGSHNQIAIVEEFFKNFKTEDNIVVIDPVMGDYGNLYPTYTDETCQEMKKLVKYADILTPN LTEACILTDEPYRPDYSNDELKKIAMKLVAMGPSKIVITGIQRGHYIGNYCYEKNREDYLIKTMKVGTQRSGTGDIFASI IAADAVNGVNFHESVRKASTFIKKCILKAIEMDIPLTDGVPFEELLTTLK
Sequences:
>Translated_290_residues MPHLDERRDNMPENNVSHNNQKKIAAINDYSGFGRCSIAVELPVISAMKIQCCPMPTSIFSNHTGFDSFYFKDFTENMPP YMAEWKKLNLKFDGIVTGFLGSHNQIAIVEEFFKNFKTEDNIVVIDPVMGDYGNLYPTYTDETCQEMKKLVKYADILTPN LTEACILTDEPYRPDYSNDELKKIAMKLVAMGPSKIVITGIQRGHYIGNYCYEKNREDYLIKTMKVGTQRSGTGDIFASI IAADAVNGVNFHESVRKASTFIKKCILKAIEMDIPLTDGVPFEELLTTLK >Mature_289_residues PHLDERRDNMPENNVSHNNQKKIAAINDYSGFGRCSIAVELPVISAMKIQCCPMPTSIFSNHTGFDSFYFKDFTENMPPY MAEWKKLNLKFDGIVTGFLGSHNQIAIVEEFFKNFKTEDNIVVIDPVMGDYGNLYPTYTDETCQEMKKLVKYADILTPNL TEACILTDEPYRPDYSNDELKKIAMKLVAMGPSKIVITGIQRGHYIGNYCYEKNREDYLIKTMKVGTQRSGTGDIFASII AADAVNGVNFHESVRKASTFIKKCILKAIEMDIPLTDGVPFEELLTTLK
Specific function: Phosphorylates B6 Vitamers; Functions In A Salvage Pathway. Uses Pyridoxal, Pyridoxine, And Pyridoxamine As Substrates. [C]
COG id: COG2240
COG function: function code H; Pyridoxal/pyridoxine/pyridoxamine kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505701, Length=215, Percent_Identity=29.3023255813954, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1788758, Length=260, Percent_Identity=23.8461538461538, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.7.1.35
Molecular weight: Translated: 32824; Mature: 32693
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHLDERRDNMPENNVSHNNQKKIAAINDYSGFGRCSIAVELPVISAMKIQCCPMPTSIF CCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHH SNHTGFDSFYFKDFTENMPPYMAEWKKLNLKFDGIVTGFLGSHNQIAIVEEFFKNFKTED CCCCCCCHHHHHHHHCCCCHHHHHHHHCCEEECCEEEECCCCCCCCHHHHHHHHHCCCCC NIVVIDPVMGDYGNLYPTYTDETCQEMKKLVKYADILTPNLTEACILTDEPYRPDYSNDE CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHH LKKIAMKLVAMGPSKIVITGIQRGHYIGNYCYEKNREDYLIKTMKVGTQRSGTGDIFASI HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHH IAADAVNGVNFHESVRKASTFIKKCILKAIEMDIPLTDGVPFEELLTTLK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure PHLDERRDNMPENNVSHNNQKKIAAINDYSGFGRCSIAVELPVISAMKIQCCPMPTSIF CCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHH SNHTGFDSFYFKDFTENMPPYMAEWKKLNLKFDGIVTGFLGSHNQIAIVEEFFKNFKTED CCCCCCCHHHHHHHHCCCCHHHHHHHHCCEEECCEEEECCCCCCCCHHHHHHHHHCCCCC NIVVIDPVMGDYGNLYPTYTDETCQEMKKLVKYADILTPNLTEACILTDEPYRPDYSNDE CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHH LKKIAMKLVAMGPSKIVITGIQRGHYIGNYCYEKNREDYLIKTMKVGTQRSGTGDIFASI HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHH IAADAVNGVNFHESVRKASTFIKKCILKAIEMDIPLTDGVPFEELLTTLK HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; pyridoxal
Specific reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate
General reaction: Phospho group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA