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The map label for this gene is nrdR [H]

Identifier: 238917255

GI number: 238917255

Start: 1363997

End: 1364458

Strand: Reverse

Name: nrdR [H]

Synonym: EUBELI_01329

Alternate gene names: 238917255

Gene position: 1364458-1363997 (Counterclockwise)

Preceding gene: 238917259

Following gene: 238917254

Centisome position: 63.64

GC content: 35.71

Gene sequence:

>462_bases
TTGGAGGTAGATAGCGTGAAGTGTCCATTTTGTGGTAAAGATAACACTAAGGTAATTGATTCAAGACCGACTGATGACAG
CTCAATAAGAAGACGTCGTCAGTGTGACGAGTGTGGTAAGCGTTTTACCACATATGAAAAGATTGAATCTATGCCTCTTA
TTGTGATTAAGAAGGATAATAACAGAGAACCATATGACAGAGAGAAGATAACTGCGGGTATTGTCAGATCGTGCCATAAA
AGGCCTGTATCTATCTCACAGATTAATAATATGGTTGATGAGATTGAGACACAGATATTTAATATTGGAGAGAAAGAAAT
CTCAACTAAAACTATTGGTGAGATTGTAATGAGCAAGCTTAAGGCAGTTGATGAGGTTGCCTATGTAAGATTTGCATCTG
TTTACAGAGAATTTAAGGATGTTGATTCATTTATGGAAGAGATTAAGAAAATCCTTAAATAA

Upstream 100 bases:

>100_bases
CATAATCCCTCCTTAAATAATAATTGGTTTTTCAATTTATCAACATTAAAAGGATTGACATTTTGGCTGGGCTTATTCAT
AATTAATTTATATATTTAAT

Downstream 100 bases:

>100_bases
TATATATCAGTAATTAAGAAAGGCAGCATTTTTGTTATGTTTAAGAGGTTTTATCCTGATATATATATTGATTCAGCTTA
CGACATAGATTATGAAGGAC

Product: NrdR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MEVDSVKCPFCGKDNTKVIDSRPTDDSSIRRRRQCDECGKRFTTYEKIESMPLIVIKKDNNREPYDREKITAGIVRSCHK
RPVSISQINNMVDEIETQIFNIGEKEISTKTIGEIVMSKLKAVDEVAYVRFASVYREFKDVDSFMEEIKKILK

Sequences:

>Translated_153_residues
MEVDSVKCPFCGKDNTKVIDSRPTDDSSIRRRRQCDECGKRFTTYEKIESMPLIVIKKDNNREPYDREKITAGIVRSCHK
RPVSISQINNMVDEIETQIFNIGEKEISTKTIGEIVMSKLKAVDEVAYVRFASVYREFKDVDSFMEEIKKILK
>Mature_153_residues
MEVDSVKCPFCGKDNTKVIDSRPTDDSSIRRRRQCDECGKRFTTYEKIESMPLIVIKKDNNREPYDREKITAGIVRSCHK
RPVSISQINNMVDEIETQIFNIGEKEISTKTIGEIVMSKLKAVDEVAYVRFASVYREFKDVDSFMEEIKKILK

Specific function: Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes [H]

COG id: COG1327

COG function: function code K; Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ATP-cone domain [H]

Homologues:

Organism=Escherichia coli, GI1786615, Length=147, Percent_Identity=46.9387755102041, Blast_Score=143, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR003796 [H]

Pfam domain/function: PF03477 ATP-cone [H]

EC number: NA

Molecular weight: Translated: 17764; Mature: 17764

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVDSVKCPFCGKDNTKVIDSRPTDDSSIRRRRQCDECGKRFTTYEKIESMPLIVIKKDN
CCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
NREPYDREKITAGIVRSCHKRPVSISQINNMVDEIETQIFNIGEKEISTKTIGEIVMSKL
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KAVDEVAYVRFASVYREFKDVDSFMEEIKKILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MEVDSVKCPFCGKDNTKVIDSRPTDDSSIRRRRQCDECGKRFTTYEKIESMPLIVIKKDN
CCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
NREPYDREKITAGIVRSCHKRPVSISQINNMVDEIETQIFNIGEKEISTKTIGEIVMSKL
CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
KAVDEVAYVRFASVYREFKDVDSFMEEIKKILK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA