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The map label for this gene is yjdI [H]

Identifier: 238917206

GI number: 238917206

Start: 1317772

End: 1318254

Strand: Reverse

Name: yjdI [H]

Synonym: EUBELI_01279

Alternate gene names: 238917206

Gene position: 1318254-1317772 (Counterclockwise)

Preceding gene: 238917207

Following gene: 238917205

Centisome position: 61.48

GC content: 38.72

Gene sequence:

>483_bases
ATGGGAAAATCAGACGATAAGACTAATGTATGCAGAGTGCTTGACCAGAAAAAAGTACCTTATAAAACACATGTGTGCCC
CGATGCAGAAGGGCTAAGCGGTGATGAGATAGCTGCTGTTCTTAATGAGAATCCGGCACAGGCTTTCAAGACACTTGTTA
CAGTTGGCAAGACAGGTAAGAATTATGTATTTGTTGTTCCTGTTAATAAGGAACTGGATTTGAAGAAAGCAGCAAAGGCT
GTTGGAGAAAAATCAATAGAAATGATTAAATCAAAGGAACTACTTCCGCTTACAGGCTATGTGCATGGGGGCTGTTCGCC
TATAGGAATGAAGAAGTTCTTTCCGACAACATTTCATAAGACTGCTGAGAATTTTGAAACTATAATGTTTAGTGCAGGTA
AAATCGGACATCAGGTAGAAGTTAAGCTGTCTGATGTAGATAAAGTTATAAGATATCAGATTGCTGATATCGTTACAGAC
TAA

Upstream 100 bases:

>100_bases
TAGAAAAATGGAGAGTGAAGCTGAGATGAAACATATAAAAAAGCTTCATGAAAGACTTGAGAGAATGAGACAGATATAGA
ATTGCCAGAGGAATGTAATT

Downstream 100 bases:

>100_bases
GGAGAAGATAAGGATTATGAAACTCAGGGTTCCATTCTATTATGACCAGTTCCACTGTATAACTTCAGAATGTAAAGACA
ACTGTTGTGTTGGCGGCTGG

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MGKSDDKTNVCRVLDQKKVPYKTHVCPDAEGLSGDEIAAVLNENPAQAFKTLVTVGKTGKNYVFVVPVNKELDLKKAAKA
VGEKSIEMIKSKELLPLTGYVHGGCSPIGMKKFFPTTFHKTAENFETIMFSAGKIGHQVEVKLSDVDKVIRYQIADIVTD

Sequences:

>Translated_160_residues
MGKSDDKTNVCRVLDQKKVPYKTHVCPDAEGLSGDEIAAVLNENPAQAFKTLVTVGKTGKNYVFVVPVNKELDLKKAAKA
VGEKSIEMIKSKELLPLTGYVHGGCSPIGMKKFFPTTFHKTAENFETIMFSAGKIGHQVEVKLSDVDKVIRYQIADIVTD
>Mature_159_residues
GKSDDKTNVCRVLDQKKVPYKTHVCPDAEGLSGDEIAAVLNENPAQAFKTLVTVGKTGKNYVFVVPVNKELDLKKAAKAV
GEKSIEMIKSKELLPLTGYVHGGCSPIGMKKFFPTTFHKTAENFETIMFSAGKIGHQVEVKLSDVDKVIRYQIADIVTD

Specific function: May Be Involved In The Suppression Of Transcription Of Usha. [C]

COG id: COG2606

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786688, Length=154, Percent_Identity=38.3116883116883, Blast_Score=95, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004369
- InterPro:   IPR007214 [H]

Pfam domain/function: PF04073 YbaK [H]

EC number: NA

Molecular weight: Translated: 17530; Mature: 17398

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKSDDKTNVCRVLDQKKVPYKTHVCPDAEGLSGDEIAAVLNENPAQAFKTLVTVGKTGK
CCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCC
NYVFVVPVNKELDLKKAAKAVGEKSIEMIKSKELLPLTGYVHGGCSPIGMKKFFPTTFHK
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCEECCCCCCCCHHHHCCHHHHH
TAENFETIMFSAGKIGHQVEVKLSDVDKVIRYQIADIVTD
HHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GKSDDKTNVCRVLDQKKVPYKTHVCPDAEGLSGDEIAAVLNENPAQAFKTLVTVGKTGK
CCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCC
NYVFVVPVNKELDLKKAAKAVGEKSIEMIKSKELLPLTGYVHGGCSPIGMKKFFPTTFHK
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCEECCCCCCCCHHHHCCHHHHH
TAENFETIMFSAGKIGHQVEVKLSDVDKVIRYQIADIVTD
HHHHHHHHEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]