| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238917179
Identifier: 238917179
GI number: 238917179
Start: 1279928
End: 1281844
Strand: Reverse
Name: 238917179
Synonym: EUBELI_01252
Alternate gene names: NA
Gene position: 1281844-1279928 (Counterclockwise)
Preceding gene: 238917181
Following gene: 238917178
Centisome position: 59.78
GC content: 38.34
Gene sequence:
>1917_bases ATGTCAGTGCAGGATTATCTCAGTGCAGTAAAGATTGGTAAAAAAGAATATCATGCGTGTGTAAATAAGGGTACTTATCC ATATCTTCCGGTTCTGGAGGATATTATTGATGAAAGCAGTATTGACAGAGAAGTCAGTCTTGGAAGTGACCAGATTCCAT TAAGGCTGGTAGTAGGAACATGTACAGCAGGAAGAACTACAGCATTTGCAGACAACTTTATGCCTATACTTGACTGGGGA ACAGAATTTTCGGCAAAGTGGGCTTCACTTAGCGACAGTCAGGTAAATGAGGGAATAAGAGACGATATTAAAGTATATGA GTACATGAATAAGTTCTATGTGCTTGAAGGTAATAAAAGAGTCAGTGTACTTAAGTATTTTAAGGCGGTGACAGTAAGTG CACAGGTTATAAGAAAGATACCTAAGTATAGTGATGATCCTGATGTTAAGATATATTATGAATTCATGGATTTTTATAAA TCTACTAAGTTAAATGATATATATTTCAGTAAAGAGGGCAGTTTTACAACTCTTATGGAGCTGGTTGGAATTACACCAGG AGAACCAATGGATGAGGATGATAAGAAAGACCTTGTTTCGTGCTATCTTAATTTCAGGCTTGCTTATGAATCAAGAGGAG GGGATAAGTTCGATTTTCCGACGGGAGATTCATTTTTACGATTCATTCACATTCACGGATATGATGCTGTTAAGAGAATG ACTAAGTCTGAGATGGCAAAGAATGTTGCCAAGACATGGGCTGAATTCGAGCTTATTGATGATAACAGCGAAGTGGAACT TAAGATGACACCAGCTGCAGCACCTAAGAAGAATATATTAAGCTATCTGCTTCCAATGGGAGGAGTTAAGAAGCTTAAGG TTGGATTTGTGTATGAAAAGACTCCGCAGGATTCAGAGTGGTGCTATGCACATGAGCTTGGAAGACAGTATATTGATGAT ACATTTGGTGACCAGATAGAAACATATGTAGAGGAGAATGTGATACCAGAGCAGAGTGATGAGGCAGCAATTAACAGACT TATAGAGAAAGGCTGTGACCTGATATTCCTGACATCGTCGGCAATGAGTATGGCCGGACTAAAAGCTGCAATAGCACATC CGTCAGTAAAGATTCTTGATTGTTCACTTAATATTTCACATAAATATATAAGGTCATATTATGCGAGAATGTTTGAAGCA AAGTTTATAACGGGAATTATTGCAGGCTCAATGGCTGATGATGATAATGTTGGTTATATAGCTGATAATCCGGTTTATGG AGCGTGTGCGAATATTAATGCATTTGCACTGGGAGTAAAGTTTGTTAATCCAAGAGCCAAGGTTTACCTTGAATGGAATA GTATTAATGATAATGATTCTGAGGGAAATCTTGCTAAGAAGAATATAAGCATTATATCTAATCAGGATATGATTACTCCG GGCAAGAGCAAGAGAAGATTTGGATTGTATAAAGCAAGTGATTCAGATAAGCATCTGGCTATGCCTGTATGGCACTGGGG AGTTTTTTATGAAAAGCTTATCCAGAGCATTATGAGCGGTTCATGGAGTAAGGATGAGGACGGAGATAATGTAAAAGCAC TTAATTACTGGTGGGGAATGTCAGCAGGAGTTGTTGATCTTATATATTCAGAGAGCCTTCCATCAGCAACTAAGAGGCTT GTAAAGCTCTTTGAGAAAGAACTTAAGGAGGCAAGGTTCAGAGTGTTTGAGGGCGAATTAAAAGATCAGCAGGGTAATAT AAGGGTTGAAGAAGGAAAGCTTATTGATCCGGAACATATAATTACTATGGACTGGCTGCTTGATAATGTGGTTGGCAGAC TGCCTCGGTATGATGAACTTACAGATAATGCTAAATTAAAAATGGCACTTCAGGGTGTTATCAAAGAAGAAGAATAG
Upstream 100 bases:
>100_bases TATATATGTAAGTAGAAATAAATAAGATATGGCGGTCTGCAAATGTTACATACAGGAACATTAAAGGGTAGAATGCAGAC AGAAAGGAAAGGTAAAAGAT
Downstream 100 bases:
>100_bases AAAGCATGCTGCCTGCAGTGGTGGCTGGGGAATTATTAATGAAAATACTTGTGTTAGCGGATGTTGAATCAAAGTACTTA TGGGATTATTTCGAAAAGGA
Product: basic membrane protein A-like protein
Products: NA
Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Bmp Family Membrane Protein; Lipoprotein; ABC Transporter Periplasmic/Surface Lipoprotein; ABC Transporter; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; Outer Membrane Lipoprotein; Surface Lipoprotein; Basic Membrane Protein A-Like Protein; Signal Peptide Protein; ABC Transporter Periplasmic Protein
Number of amino acids: Translated: 638; Mature: 637
Protein sequence:
>638_residues MSVQDYLSAVKIGKKEYHACVNKGTYPYLPVLEDIIDESSIDREVSLGSDQIPLRLVVGTCTAGRTTAFADNFMPILDWG TEFSAKWASLSDSQVNEGIRDDIKVYEYMNKFYVLEGNKRVSVLKYFKAVTVSAQVIRKIPKYSDDPDVKIYYEFMDFYK STKLNDIYFSKEGSFTTLMELVGITPGEPMDEDDKKDLVSCYLNFRLAYESRGGDKFDFPTGDSFLRFIHIHGYDAVKRM TKSEMAKNVAKTWAEFELIDDNSEVELKMTPAAAPKKNILSYLLPMGGVKKLKVGFVYEKTPQDSEWCYAHELGRQYIDD TFGDQIETYVEENVIPEQSDEAAINRLIEKGCDLIFLTSSAMSMAGLKAAIAHPSVKILDCSLNISHKYIRSYYARMFEA KFITGIIAGSMADDDNVGYIADNPVYGACANINAFALGVKFVNPRAKVYLEWNSINDNDSEGNLAKKNISIISNQDMITP GKSKRRFGLYKASDSDKHLAMPVWHWGVFYEKLIQSIMSGSWSKDEDGDNVKALNYWWGMSAGVVDLIYSESLPSATKRL VKLFEKELKEARFRVFEGELKDQQGNIRVEEGKLIDPEHIITMDWLLDNVVGRLPRYDELTDNAKLKMALQGVIKEEE
Sequences:
>Translated_638_residues MSVQDYLSAVKIGKKEYHACVNKGTYPYLPVLEDIIDESSIDREVSLGSDQIPLRLVVGTCTAGRTTAFADNFMPILDWG TEFSAKWASLSDSQVNEGIRDDIKVYEYMNKFYVLEGNKRVSVLKYFKAVTVSAQVIRKIPKYSDDPDVKIYYEFMDFYK STKLNDIYFSKEGSFTTLMELVGITPGEPMDEDDKKDLVSCYLNFRLAYESRGGDKFDFPTGDSFLRFIHIHGYDAVKRM TKSEMAKNVAKTWAEFELIDDNSEVELKMTPAAAPKKNILSYLLPMGGVKKLKVGFVYEKTPQDSEWCYAHELGRQYIDD TFGDQIETYVEENVIPEQSDEAAINRLIEKGCDLIFLTSSAMSMAGLKAAIAHPSVKILDCSLNISHKYIRSYYARMFEA KFITGIIAGSMADDDNVGYIADNPVYGACANINAFALGVKFVNPRAKVYLEWNSINDNDSEGNLAKKNISIISNQDMITP GKSKRRFGLYKASDSDKHLAMPVWHWGVFYEKLIQSIMSGSWSKDEDGDNVKALNYWWGMSAGVVDLIYSESLPSATKRL VKLFEKELKEARFRVFEGELKDQQGNIRVEEGKLIDPEHIITMDWLLDNVVGRLPRYDELTDNAKLKMALQGVIKEEE >Mature_637_residues SVQDYLSAVKIGKKEYHACVNKGTYPYLPVLEDIIDESSIDREVSLGSDQIPLRLVVGTCTAGRTTAFADNFMPILDWGT EFSAKWASLSDSQVNEGIRDDIKVYEYMNKFYVLEGNKRVSVLKYFKAVTVSAQVIRKIPKYSDDPDVKIYYEFMDFYKS TKLNDIYFSKEGSFTTLMELVGITPGEPMDEDDKKDLVSCYLNFRLAYESRGGDKFDFPTGDSFLRFIHIHGYDAVKRMT KSEMAKNVAKTWAEFELIDDNSEVELKMTPAAAPKKNILSYLLPMGGVKKLKVGFVYEKTPQDSEWCYAHELGRQYIDDT FGDQIETYVEENVIPEQSDEAAINRLIEKGCDLIFLTSSAMSMAGLKAAIAHPSVKILDCSLNISHKYIRSYYARMFEAK FITGIIAGSMADDDNVGYIADNPVYGACANINAFALGVKFVNPRAKVYLEWNSINDNDSEGNLAKKNISIISNQDMITPG KSKRRFGLYKASDSDKHLAMPVWHWGVFYEKLIQSIMSGSWSKDEDGDNVKALNYWWGMSAGVVDLIYSESLPSATKRLV KLFEKELKEARFRVFEGELKDQQGNIRVEEGKLIDPEHIITMDWLLDNVVGRLPRYDELTDNAKLKMALQGVIKEEE
Specific function: Unknown
COG id: COG1744
COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72346; Mature: 72215
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVQDYLSAVKIGKKEYHACVNKGTYPYLPVLEDIIDESSIDREVSLGSDQIPLRLVVGT CCHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEE CTAGRTTAFADNFMPILDWGTEFSAKWASLSDSQVNEGIRDDIKVYEYMNKFYVLEGNKR CCCCCCHHHHCCCCEEEECCCCCCCHHCCCCHHHHHCCHHHHHHHHHHHCCEEEEECCCC VSVLKYFKAVTVSAQVIRKIPKYSDDPDVKIYYEFMDFYKSTKLNDIYFSKEGSFTTLME HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCCCEEEEECCCCHHHHHH LVGITPGEPMDEDDKKDLVSCYLNFRLAYESRGGDKFDFPTGDSFLRFIHIHGYDAVKRM HHCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHH TKSEMAKNVAKTWAEFELIDDNSEVELKMTPAAAPKKNILSYLLPMGGVKKLKVGFVYEK HHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEEC TPQDSEWCYAHELGRQYIDDTFGDQIETYVEENVIPEQSDEAAINRLIEKGCDLIFLTSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECC AMSMAGLKAAIAHPSVKILDCSLNISHKYIRSYYARMFEAKFITGIIAGSMADDDNVGYI HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE ADNPVYGACANINAFALGVKFVNPRAKVYLEWNSINDNDSEGNLAKKNISIISNQDMITP ECCCCCCEECCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCEECCCEEEEECCCCCCC GKSKRRFGLYKASDSDKHLAMPVWHWGVFYEKLIQSIMSGSWSKDEDGDNVKALNYWWGM CCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC SAGVVDLIYSESLPSATKRLVKLFEKELKEARFRVFEGELKDQQGNIRVEEGKLIDPEHI CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEECCHHE ITMDWLLDNVVGRLPRYDELTDNAKLKMALQGVIKEEE EEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC >Mature Secondary Structure SVQDYLSAVKIGKKEYHACVNKGTYPYLPVLEDIIDESSIDREVSLGSDQIPLRLVVGT CHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCEEEEEEE CTAGRTTAFADNFMPILDWGTEFSAKWASLSDSQVNEGIRDDIKVYEYMNKFYVLEGNKR CCCCCCHHHHCCCCEEEECCCCCCCHHCCCCHHHHHCCHHHHHHHHHHHCCEEEEECCCC VSVLKYFKAVTVSAQVIRKIPKYSDDPDVKIYYEFMDFYKSTKLNDIYFSKEGSFTTLME HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHCCCCCEEEEECCCCHHHHHH LVGITPGEPMDEDDKKDLVSCYLNFRLAYESRGGDKFDFPTGDSFLRFIHIHGYDAVKRM HHCCCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEEECCHHHHHHH TKSEMAKNVAKTWAEFELIDDNSEVELKMTPAAAPKKNILSYLLPMGGVKKLKVGFVYEK HHHHHHHHHHHHHHHEEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEEEEEC TPQDSEWCYAHELGRQYIDDTFGDQIETYVEENVIPEQSDEAAINRLIEKGCDLIFLTSS CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEECC AMSMAGLKAAIAHPSVKILDCSLNISHKYIRSYYARMFEAKFITGIIAGSMADDDNVGYI HHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEE ADNPVYGACANINAFALGVKFVNPRAKVYLEWNSINDNDSEGNLAKKNISIISNQDMITP ECCCCCCEECCCCEEEEEEEEECCCEEEEEEECCCCCCCCCCCEECCCEEEEECCCCCCC GKSKRRFGLYKASDSDKHLAMPVWHWGVFYEKLIQSIMSGSWSKDEDGDNVKALNYWWGM CCCCCEEEEEECCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCC SAGVVDLIYSESLPSATKRLVKLFEKELKEARFRVFEGELKDQQGNIRVEEGKLIDPEHI CCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCEECCHHE ITMDWLLDNVVGRLPRYDELTDNAKLKMALQGVIKEEE EEHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA