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The map label for this gene is spoVB [H]

Identifier: 238917125

GI number: 238917125

Start: 1209639

End: 1210754

Strand: Direct

Name: spoVB [H]

Synonym: EUBELI_01196

Alternate gene names: 238917125

Gene position: 1209639-1210754 (Clockwise)

Preceding gene: 238917121

Following gene: 238917137

Centisome position: 56.41

GC content: 39.78

Gene sequence:

>1116_bases
ATGTGCATACATAACTGCTTGTCTAATTACTATTACAGTCAGAAGGAATCTTTTCTGCCAGCCTCCTCACAGCTTGTCGA
ACAGCTTGTGCGTATTGGCACTATTATACTTTATGTGCGCATAAAAAATGTATCAACAATATCCATTGCTGACGCTGTTA
CCGGTAATATATTCGGTGAATTTGCAGCTGCCACATACTGTGCTATTCCGCTGTTTTTCCGTTCCATTCATAATAAAAGC
ATGATGCAGAAGCTCTCCTGTTCACTCCGTGAATACAGATATATTGTTAAATATGCATTTCCAATTAACGCCAATCAGAC
TGTTCTGCATCTGCTTGAGGGTGCGGAAGCAATTCTTATTCCTGCAATCCTGTGCATGCATGGACTGACCAAAGATAACG
CGATAAGCCAGTTTGGTATACTTACAGGAATGGCTCTTCCTCTGGTGCTTTTCCCATGTACGGCAGCTAATTCATTTGCA
CTTATGCTTCTTCCAAAGGTATCTGATGAAAGTTCGAATGTCCTGTCTGACCATCTTGCTGTGACAGTAAAAAGAACAGT
TTCCATGTGTTTAAGTCTCGGCATTATAAGCATATTTTTATTCATTAACTATGGTGCGCGCCTCGGTGCAATGATGTTCC
ACGAAGACTCTGTATACATATACACCTGCATTCTTTCATGGCTGTGTCCTTTCCTCTACTTAAAAATCAGCCTTACAAGC
GTGACTAATGGCATGGGACATACCGCCCTTACATTCATAATTAATATAACCGGAATTATCATCCGGCTTGCCTGTGTATT
TCTGCTTATTCCAAAGCTTGGCATAACCGGTTATCTGTATGGTGTTCTTATTAGCAACATATGCATGAGTCTGCTTTACA
TTTTTAATATATACAAGAAGCTGAACATCCAGCCAGACCCGTTTGGCAGTATAATTGTGCCATTATGTATTGCGGTCATA
TCTATATTTTCATCAAGAATTATATGCCGCATTGTATTTGGTCTTATAATAAAAGAAGCAGAAGAATACACTCTCCTGCT
TACCGGTGCCGCCATATGCTGCATTGTATATATTATTCTCTTTATTCATGAACAATCGGAACAGCGTCCTTTATAG

Upstream 100 bases:

>100_bases
GCTTTTATTTCTTATATTCAGCGATTTCATTGCAAACCATATATTTATGGAAAGCCGCTGTGAGGGAATAATCCGTATAA
CTGCAATCTCTCTGCCATTC

Downstream 100 bases:

>100_bases
ACGGTGCCGCTTTCCAATAGTCAAGTCTGGATTCGTACTGCTGCCTTATCCATTCCACGGCAGCAAGACGACCATCTTCT
GTCAGTTCAAATATCTCTGT

Product: stage V sporulation protein B

Products: NA

Alternate protein names: Stage III sporulation protein F [H]

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MCIHNCLSNYYYSQKESFLPASSQLVEQLVRIGTIILYVRIKNVSTISIADAVTGNIFGEFAAATYCAIPLFFRSIHNKS
MMQKLSCSLREYRYIVKYAFPINANQTVLHLLEGAEAILIPAILCMHGLTKDNAISQFGILTGMALPLVLFPCTAANSFA
LMLLPKVSDESSNVLSDHLAVTVKRTVSMCLSLGIISIFLFINYGARLGAMMFHEDSVYIYTCILSWLCPFLYLKISLTS
VTNGMGHTALTFIINITGIIIRLACVFLLIPKLGITGYLYGVLISNICMSLLYIFNIYKKLNIQPDPFGSIIVPLCIAVI
SIFSSRIICRIVFGLIIKEAEEYTLLLTGAAICCIVYIILFIHEQSEQRPL

Sequences:

>Translated_371_residues
MCIHNCLSNYYYSQKESFLPASSQLVEQLVRIGTIILYVRIKNVSTISIADAVTGNIFGEFAAATYCAIPLFFRSIHNKS
MMQKLSCSLREYRYIVKYAFPINANQTVLHLLEGAEAILIPAILCMHGLTKDNAISQFGILTGMALPLVLFPCTAANSFA
LMLLPKVSDESSNVLSDHLAVTVKRTVSMCLSLGIISIFLFINYGARLGAMMFHEDSVYIYTCILSWLCPFLYLKISLTS
VTNGMGHTALTFIINITGIIIRLACVFLLIPKLGITGYLYGVLISNICMSLLYIFNIYKKLNIQPDPFGSIIVPLCIAVI
SIFSSRIICRIVFGLIIKEAEEYTLLLTGAAICCIVYIILFIHEQSEQRPL
>Mature_371_residues
MCIHNCLSNYYYSQKESFLPASSQLVEQLVRIGTIILYVRIKNVSTISIADAVTGNIFGEFAAATYCAIPLFFRSIHNKS
MMQKLSCSLREYRYIVKYAFPINANQTVLHLLEGAEAILIPAILCMHGLTKDNAISQFGILTGMALPLVLFPCTAANSFA
LMLLPKVSDESSNVLSDHLAVTVKRTVSMCLSLGIISIFLFINYGARLGAMMFHEDSVYIYTCILSWLCPFLYLKISLTS
VTNGMGHTALTFIINITGIIIRLACVFLLIPKLGITGYLYGVLISNICMSLLYIFNIYKKLNIQPDPFGSIIVPLCIAVI
SIFSSRIICRIVFGLIIKEAEEYTLLLTGAAICCIVYIILFIHEQSEQRPL

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 41231; Mature: 41231

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCIHNCLSNYYYSQKESFLPASSQLVEQLVRIGTIILYVRIKNVSTISIADAVTGNIFGE
CCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHEEEEEEECCCCEEEHHHHHHHHHHHH
FAAATYCAIPLFFRSIHNKSMMQKLSCSLREYRYIVKYAFPINANQTVLHLLEGAEAILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCHHHHH
PAILCMHGLTKDNAISQFGILTGMALPLVLFPCTAANSFALMLLPKVSDESSNVLSDHLA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHH
VTVKRTVSMCLSLGIISIFLFINYGARLGAMMFHEDSVYIYTCILSWLCPFLYLKISLTS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
VTNGMGHTALTFIINITGIIIRLACVFLLIPKLGITGYLYGVLISNICMSLLYIFNIYKK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNIQPDPFGSIIVPLCIAVISIFSSRIICRIVFGLIIKEAEEYTLLLTGAAICCIVYIIL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHH
FIHEQSEQRPL
HHHCCCCCCCC
>Mature Secondary Structure
MCIHNCLSNYYYSQKESFLPASSQLVEQLVRIGTIILYVRIKNVSTISIADAVTGNIFGE
CCHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHEEEEEEECCCCEEEHHHHHHHHHHHH
FAAATYCAIPLFFRSIHNKSMMQKLSCSLREYRYIVKYAFPINANQTVLHLLEGAEAILI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHCCHHHHH
PAILCMHGLTKDNAISQFGILTGMALPLVLFPCTAANSFALMLLPKVSDESSNVLSDHLA
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHH
VTVKRTVSMCLSLGIISIFLFINYGARLGAMMFHEDSVYIYTCILSWLCPFLYLKISLTS
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHH
VTNGMGHTALTFIINITGIIIRLACVFLLIPKLGITGYLYGVLISNICMSLLYIFNIYKK
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNIQPDPFGSIIVPLCIAVISIFSSRIICRIVFGLIIKEAEEYTLLLTGAAICCIVYIIL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHH
FIHEQSEQRPL
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377 [H]