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The map label for this gene is bioY [H]

Identifier: 238917102

GI number: 238917102

Start: 1185680

End: 1186237

Strand: Reverse

Name: bioY [H]

Synonym: EUBELI_01172

Alternate gene names: 238917102

Gene position: 1186237-1185680 (Counterclockwise)

Preceding gene: 238917103

Following gene: 238917100

Centisome position: 55.32

GC content: 37.1

Gene sequence:

>558_bases
ATGAAAAGTAAAAAGGTTACTATTTATCAGCTGACATTTATGGCTATGATGGCAGCAGTTACATGTATTCTTGGACCACT
TTCAGTTCCAATTGGTCAGATTCCAATATCTCTTACTAATCTTGTGATTTATTTCACAGTATTTGTACTGGGCATATGGG
CAGGAACAGGAAGCTATGGAATATATCTGCTGCTTGGTGCTGTAGGACTTCCTGTATTTTCAGGATTTGCTGGTGGATTA
GGAAAGCTTCTTGGACCAACAGGAGGATATCTTATAGGTTTCATATTCATGGCACTTATTGGAGGAGCTGTGATTGAGCT
TTCACACAGAAATATTTTTCTTACAATGCTTGGCTGGGTAGTTGGAACTGCTGTTGCATACGCATTTGGTACGGTATGGT
TTGTATACCTTATGAAATGTTCAGTCACATATGCACTTACAGTATGTGTATATCCATTTATCGGATTTGATATTGTTAAG
ATAGTTATTGCAACACTTCTTGGAAAGACAGTAAGATATGCAATAACTAAAGCTGGTTTTATACAGAAAGCAGCATAA

Upstream 100 bases:

>100_bases
ACTGAATGTCAACTTGAATTAATAATAGGTTGACAATAGCTTTTTGAGTGTGTACAATAACAAATGTTGTATTACTACAT
TTGAAAAGAGGACTTTAATT

Downstream 100 bases:

>100_bases
TAAGTAAAAGAAAAAGGTGTCTCCGGATTAACGGAGACACCTTTTTAAGTACAATGCAGAATTAATTATCTGAGAGTCTT
AACATACTCAGCAATCTTCT

Product: biotin biosynthesis protein BioY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MKSKKVTIYQLTFMAMMAAVTCILGPLSVPIGQIPISLTNLVIYFTVFVLGIWAGTGSYGIYLLLGAVGLPVFSGFAGGL
GKLLGPTGGYLIGFIFMALIGGAVIELSHRNIFLTMLGWVVGTAVAYAFGTVWFVYLMKCSVTYALTVCVYPFIGFDIVK
IVIATLLGKTVRYAITKAGFIQKAA

Sequences:

>Translated_185_residues
MKSKKVTIYQLTFMAMMAAVTCILGPLSVPIGQIPISLTNLVIYFTVFVLGIWAGTGSYGIYLLLGAVGLPVFSGFAGGL
GKLLGPTGGYLIGFIFMALIGGAVIELSHRNIFLTMLGWVVGTAVAYAFGTVWFVYLMKCSVTYALTVCVYPFIGFDIVK
IVIATLLGKTVRYAITKAGFIQKAA
>Mature_185_residues
MKSKKVTIYQLTFMAMMAAVTCILGPLSVPIGQIPISLTNLVIYFTVFVLGIWAGTGSYGIYLLLGAVGLPVFSGFAGGL
GKLLGPTGGYLIGFIFMALIGGAVIELSHRNIFLTMLGWVVGTAVAYAFGTVWFVYLMKCSVTYALTVCVYPFIGFDIVK
IVIATLLGKTVRYAITKAGFIQKAA

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19718; Mature: 19718

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSKKVTIYQLTFMAMMAAVTCILGPLSVPIGQIPISLTNLVIYFTVFVLGIWAGTGSYG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
IYLLLGAVGLPVFSGFAGGLGKLLGPTGGYLIGFIFMALIGGAVIELSHRNIFLTMLGWV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHH
VGTAVAYAFGTVWFVYLMKCSVTYALTVCVYPFIGFDIVKIVIATLLGKTVRYAITKAGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQKAA
HHCCC
>Mature Secondary Structure
MKSKKVTIYQLTFMAMMAAVTCILGPLSVPIGQIPISLTNLVIYFTVFVLGIWAGTGSYG
CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHH
IYLLLGAVGLPVFSGFAGGLGKLLGPTGGYLIGFIFMALIGGAVIELSHRNIFLTMLGWV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHH
VGTAVAYAFGTVWFVYLMKCSVTYALTVCVYPFIGFDIVKIVIATLLGKTVRYAITKAGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQKAA
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]