| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is coaBC [H]
Identifier: 238917086
GI number: 238917086
Start: 1168115
End: 1169308
Strand: Reverse
Name: coaBC [H]
Synonym: EUBELI_01156
Alternate gene names: 238917086
Gene position: 1169308-1168115 (Counterclockwise)
Preceding gene: 238917087
Following gene: 238917084
Centisome position: 54.53
GC content: 39.03
Gene sequence:
>1194_bases ATGCTTAAGGGAAAGACAGTTGTTCTTGGAGTAACAGGCAGTATAGCAGCATATAAGATTGCTAATCTTGCAAGTATGCT TGTAAAGAAGCATGCCAATGTGCATGTTATAATGACTGAGAATGCATGCAATTTTATTAATCCGATAACATTTGAGACAC TTACAGGAAATAAGTGCTTAGTTGATACATTTGACAGAAACTTCCAGTTTAATGTTGAGCATGTCAGCCTTGCAAAGCTG GCTGATATATTCCTTGTAGCACCTGCTTCGGCAGATGTAATAGGAAAGATTGCAAATGGGATAGCAGACGATATGCTGAC TACAACAATTATGGCATGCAAATGTCCAAAGCTTATATCACCTGCGATGAACACTAATATGTTTACTAATCCTATAGTAC AGGATAATCTTAAGAAATTAGAGCATTATGGATATGAAATTATCCAGCCTGACAGCGGATATCTTGCGTGTGGAGATACA GGTGCGGGAAAGATGCCGTCGGAGCAGGTTCTTCTTAATTACATCTTAAGGACAATAGCTAAAGATAAGGATATGACCGG AATTAAGCTTACAGTTACTGCAGGACCTACAAGAGAGAAGTTAGACCCTGTAAGATTCTTATCTAATAATTCCACTGGAA AAATGGGATATGCAATTGCTAAGATGGCAATGCTTCGTGGAGCGGATGTAACACTTATATCAGGAAAAGTAAGCCTTGAG CCGGTGCCATTTGTTAAGATGGTGGATATTGTTTCAGCAGAGGATATGTATAATGCAGTAATTAAGAGTGCTAAAGACGC AGATATAATAATCAAGGCAGCAGCAGTTGCAGATTACAGACCGTCTGATGTAAGCGATGAAAAGATTAAGAAAAAAGATG GTGATATGTCAATTCCTCTTGAGCGGACTAAAGATATAATCGGCACACTTGGAAGCAGTAAAAGAGATGGATTGTTCCTG TGCGGATTCTCAATGGAAACAGAGCATATGCTTGACAATTCCAAGGTGAAGCTTACAAAGAAGAATCTTGATATGATAGT GGCTAATAATGTCAAAGTGGCAGGAGCCGGATTTGGAACAGATACCAATGTGGTTACTGTTATTACTAAAGATGCAGTCG AGGAGCTTCCTATGATGAGTAAGGAAGAGGTTGCTGACGCACTTCTTGACAGAATAATGAAAGCAAGACAATAA
Upstream 100 bases:
>100_bases GAATAGAATTGAGACTGACCCTGCACTTCTTATAAGAGGTCTGAAATACATTTATGATAAAAATGTCTAGAAAGTGGCTG AATAGGCGGGAGGAGATAAT
Downstream 100 bases:
>100_bases TAATAAAAACAGGCTGCCGGTTAACTGGCAGCCTGTTTTGCTACATATCTTCGCCAAGTGCCTTGATTCTTCCGTAAGTA CTTAAAAGATATAAGCCGGA
Product: phosphopantothenoylcysteine decarboxylase / phosphopantothenate-cysteine ligase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MLKGKTVVLGVTGSIAAYKIANLASMLVKKHANVHVIMTENACNFINPITFETLTGNKCLVDTFDRNFQFNVEHVSLAKL ADIFLVAPASADVIGKIANGIADDMLTTTIMACKCPKLISPAMNTNMFTNPIVQDNLKKLEHYGYEIIQPDSGYLACGDT GAGKMPSEQVLLNYILRTIAKDKDMTGIKLTVTAGPTREKLDPVRFLSNNSTGKMGYAIAKMAMLRGADVTLISGKVSLE PVPFVKMVDIVSAEDMYNAVIKSAKDADIIIKAAAVADYRPSDVSDEKIKKKDGDMSIPLERTKDIIGTLGSSKRDGLFL CGFSMETEHMLDNSKVKLTKKNLDMIVANNVKVAGAGFGTDTNVVTVITKDAVEELPMMSKEEVADALLDRIMKARQ
Sequences:
>Translated_397_residues MLKGKTVVLGVTGSIAAYKIANLASMLVKKHANVHVIMTENACNFINPITFETLTGNKCLVDTFDRNFQFNVEHVSLAKL ADIFLVAPASADVIGKIANGIADDMLTTTIMACKCPKLISPAMNTNMFTNPIVQDNLKKLEHYGYEIIQPDSGYLACGDT GAGKMPSEQVLLNYILRTIAKDKDMTGIKLTVTAGPTREKLDPVRFLSNNSTGKMGYAIAKMAMLRGADVTLISGKVSLE PVPFVKMVDIVSAEDMYNAVIKSAKDADIIIKAAAVADYRPSDVSDEKIKKKDGDMSIPLERTKDIIGTLGSSKRDGLFL CGFSMETEHMLDNSKVKLTKKNLDMIVANNVKVAGAGFGTDTNVVTVITKDAVEELPMMSKEEVADALLDRIMKARQ >Mature_397_residues MLKGKTVVLGVTGSIAAYKIANLASMLVKKHANVHVIMTENACNFINPITFETLTGNKCLVDTFDRNFQFNVEHVSLAKL ADIFLVAPASADVIGKIANGIADDMLTTTIMACKCPKLISPAMNTNMFTNPIVQDNLKKLEHYGYEIIQPDSGYLACGDT GAGKMPSEQVLLNYILRTIAKDKDMTGIKLTVTAGPTREKLDPVRFLSNNSTGKMGYAIAKMAMLRGADVTLISGKVSLE PVPFVKMVDIVSAEDMYNAVIKSAKDADIIIKAAAVADYRPSDVSDEKIKKKDGDMSIPLERTKDIIGTLGSSKRDGLFL CGFSMETEHMLDNSKVKLTKKNLDMIVANNVKVAGAGFGTDTNVVTVITKDAVEELPMMSKEEVADALLDRIMKARQ
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=165, Percent_Identity=37.5757575757576, Blast_Score=94, Evalue=2e-19, Organism=Escherichia coli, GI87082301, Length=395, Percent_Identity=40.5063291139241, Blast_Score=281, Evalue=7e-77, Organism=Caenorhabditis elegans, GI17560194, Length=170, Percent_Identity=34.1176470588235, Blast_Score=83, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6322762, Length=190, Percent_Identity=31.0526315789474, Blast_Score=87, Evalue=3e-18, Organism=Drosophila melanogaster, GI24657262, Length=172, Percent_Identity=33.7209302325581, Blast_Score=95, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43041; Mature: 43041
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKGKTVVLGVTGSIAAYKIANLASMLVKKHANVHVIMTENACNFINPITFETLTGNKCL CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCEEE VDTFDRNFQFNVEHVSLAKLADIFLVAPASADVIGKIANGIADDMLTTTIMACKCPKLIS EEECCCCEEEEEHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC PAMNTNMFTNPIVQDNLKKLEHYGYEIIQPDSGYLACGDTGAGKMPSEQVLLNYILRTIA CCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH KDKDMTGIKLTVTAGPTREKLDPVRFLSNNSTGKMGYAIAKMAMLRGADVTLISGKVSLE CCCCCCCEEEEEECCCCHHHCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECEEECC PVPFVKMVDIVSAEDMYNAVIKSAKDADIIIKAAAVADYRPSDVSDEKIKKKDGDMSIPL CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCH ERTKDIIGTLGSSKRDGLFLCGFSMETEHMLDNSKVKLTKKNLDMIVANNVKVAGAGFGT HHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCEEEEEECCCCEEEECCEEEEECCCCC DTNVVTVITKDAVEELPMMSKEEVADALLDRIMKARQ CCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLKGKTVVLGVTGSIAAYKIANLASMLVKKHANVHVIMTENACNFINPITFETLTGNKCL CCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEECCCEEE VDTFDRNFQFNVEHVSLAKLADIFLVAPASADVIGKIANGIADDMLTTTIMACKCPKLIS EEECCCCEEEEEHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHC PAMNTNMFTNPIVQDNLKKLEHYGYEIIQPDSGYLACGDTGAGKMPSEQVLLNYILRTIA CCCCCCCCCCCHHHHHHHHHHHCCCEEECCCCCEEEECCCCCCCCCHHHHHHHHHHHHHH KDKDMTGIKLTVTAGPTREKLDPVRFLSNNSTGKMGYAIAKMAMLRGADVTLISGKVSLE CCCCCCCEEEEEECCCCHHHCCHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEECEEECC PVPFVKMVDIVSAEDMYNAVIKSAKDADIIIKAAAVADYRPSDVSDEKIKKKDGDMSIPL CCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHCCCCCCCCH ERTKDIIGTLGSSKRDGLFLCGFSMETEHMLDNSKVKLTKKNLDMIVANNVKVAGAGFGT HHHHHHHHHCCCCCCCCEEEEECCCCHHHHCCCCEEEEEECCCCEEEECCEEEEECCCCC DTNVVTVITKDAVEELPMMSKEEVADALLDRIMKARQ CCCEEEEEEHHHHHHCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9534248; 9384377 [H]