Click here to switch to the map view.

The map label for this gene is ylqH [H]

Identifier: 238916975

GI number: 238916975

Start: 1056777

End: 1057067

Strand: Reverse

Name: ylqH [H]

Synonym: EUBELI_01044

Alternate gene names: 238916975

Gene position: 1057067-1056777 (Counterclockwise)

Preceding gene: 238916976

Following gene: 238916974

Centisome position: 49.3

GC content: 36.77

Gene sequence:

>291_bases
ATGGAGAAAAAAAATAATGATGATAAGCCTAAAATAGCTGTTGCACTTGAATACACTCCGGGGGAACAGGCACCAAAGAT
ACTTGCAACAGGACGTGGATATATTGCTGAATCAATTATTGAAAAGGCCGGAGAGGCTGATGTTCCTATATATGCGGATT
CTAAGCTTGCTGATACTTTATCAAAACTTGAAATAGGAGAAATGATTCCTCCAGAACTATATACCGTAGTTGCAGAAATT
CTTGTATTTGTAGATGAATGCGATAAGATTAAAGGGAAAGTGGGTAAATAA

Upstream 100 bases:

>100_bases
TGTTAAGGATTTTATAGAAGCAGAGGCAAGACCAGCTGCAGGTGGACAATACATATTCGATGCAAAAGCATGACAGCTTT
ATCTAAAGAAGGAGCAGCAT

Downstream 100 bases:

>100_bases
TGGCTGTTAATAAAAGAGCTACCGGCGCAGATAAAGAACAGCTTGCTGCCAGATATCTTGTTGATAATGGGTATACTGTT
CTTGAACGGAATTTCCGCAA

Product: flagellar biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MEKKNNDDKPKIAVALEYTPGEQAPKILATGRGYIAESIIEKAGEADVPIYADSKLADTLSKLEIGEMIPPELYTVVAEI
LVFVDECDKIKGKVGK

Sequences:

>Translated_96_residues
MEKKNNDDKPKIAVALEYTPGEQAPKILATGRGYIAESIIEKAGEADVPIYADSKLADTLSKLEIGEMIPPELYTVVAEI
LVFVDECDKIKGKVGK
>Mature_96_residues
MEKKNNDDKPKIAVALEYTPGEQAPKILATGRGYIAESIIEKAGEADVPIYADSKLADTLSKLEIGEMIPPELYTVVAEI
LVFVDECDKIKGKVGK

Specific function: Required For Formation Of The Rod Structure In The Basal Body Of The Flagellar Apparatus. Together With Flii And Flih, May Constitute The Export Apparatus Of Flagellin. [C]

COG id: COG2257

COG function: function code S; Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane. [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004683
- InterPro:   IPR006135 [H]

Pfam domain/function: PF01312 Bac_export_2 [H]

EC number: NA

Molecular weight: Translated: 10436; Mature: 10436

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKKNNDDKPKIAVALEYTPGEQAPKILATGRGYIAESIIEKAGEADVPIYADSKLADTL
CCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEECCHHHHHH
SKLEIGEMIPPELYTVVAEILVFVDECDKIKGKVGK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MEKKNNDDKPKIAVALEYTPGEQAPKILATGRGYIAESIIEKAGEADVPIYADSKLADTL
CCCCCCCCCCEEEEEEEECCCCCCCEEEECCCCHHHHHHHHHCCCCCCCEEECCHHHHHH
SKLEIGEMIPPELYTVVAEILVFVDECDKIKGKVGK
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]