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The map label for this gene is yqeI [H]

Identifier: 238916944

GI number: 238916944

Start: 1028718

End: 1029041

Strand: Reverse

Name: yqeI [H]

Synonym: EUBELI_01013

Alternate gene names: 238916944

Gene position: 1029041-1028718 (Counterclockwise)

Preceding gene: 238916945

Following gene: 238916943

Centisome position: 47.99

GC content: 37.04

Gene sequence:

>324_bases
TTGATTACTATAAAGCATAATAATAGGAGAGAATATATGACAAGCAAACAGAGAGCTTATTTAAAGGGTCTTGCAATGAC
AATGGATCCAATATTCCAGTTTGGAAAGAACAGTCTTACTCCTGAGAACACCGCAGCTATTGCAGAAGCTCTTGAGGCAA
GAGAACTTATCAAAATAAGTGTTCTTAATAACTGTGCCGATGACCCTAGAGAAATCGCACAGATGGTTGCAGAAAGAACA
CGCTCACAGGTTGTTCAGGTTATTGGAAAGAAAATCGTTCTTTACAAGGAATCTAAGGACAACAAAAAAATCATTTTACC
ATGA

Upstream 100 bases:

>100_bases
TTCTTCCAGAAATTCATGAAGCGCTCAGGTGTTCTTGATGAACTTGAGAAGCTTGGAATTGAGGAAGGCGATACAGTTAT
CGTTGGTGATTACCTTGAGT

Downstream 100 bases:

>100_bases
TTAATTCAGACAAAATAATAGGTATTATGGGTGGGACATTTAATCCAATCCACAAAGGACACACAGGTATTGCCAGATGT
GCTTACGAACAGTCTGATAT

Product: RNA-binding protein containing KH domain

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MITIKHNNRREYMTSKQRAYLKGLAMTMDPIFQFGKNSLTPENTAAIAEALEARELIKISVLNNCADDPREIAQMVAERT
RSQVVQVIGKKIVLYKESKDNKKIILP

Sequences:

>Translated_107_residues
MITIKHNNRREYMTSKQRAYLKGLAMTMDPIFQFGKNSLTPENTAAIAEALEARELIKISVLNNCADDPREIAQMVAERT
RSQVVQVIGKKIVLYKESKDNKKIILP
>Mature_107_residues
MITIKHNNRREYMTSKQRAYLKGLAMTMDPIFQFGKNSLTPENTAAIAEALEARELIKISVLNNCADDPREIAQMVAERT
RSQVVQVIGKKIVLYKESKDNKKIILP

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=95, Percent_Identity=38.9473684210526, Blast_Score=66, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 12191; Mature: 12191

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITIKHNNRREYMTSKQRAYLKGLAMTMDPIFQFGKNSLTPENTAAIAEALEARELIKIS
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VLNNCADDPREIAQMVAERTRSQVVQVIGKKIVLYKESKDNKKIILP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECC
>Mature Secondary Structure
MITIKHNNRREYMTSKQRAYLKGLAMTMDPIFQFGKNSLTPENTAAIAEALEARELIKIS
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
VLNNCADDPREIAQMVAERTRSQVVQVIGKKIVLYKESKDNKKIILP
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]