| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is mrdA [H]
Identifier: 238916930
GI number: 238916930
Start: 1016722
End: 1019475
Strand: Direct
Name: mrdA [H]
Synonym: EUBELI_00999
Alternate gene names: 238916930
Gene position: 1016722-1019475 (Clockwise)
Preceding gene: 238916929
Following gene: 238916931
Centisome position: 47.42
GC content: 34.42
Gene sequence:
>2754_bases ATGAAGGAAGTATTTGAGTATATTGTTAGTCTCCTGAAATCAAGGATTTTTCCTATGATTCTTGTGTTTATTATTATGAT TTCCATTCTTGTACACAGATTATTTGTTCTTCAGATAGTAAATGGAGACTCATATGTAGAGGATTTATCCAGTTCTATTA AAAAGGATATGAGCGTTGTGGCTGCGAGAGGCCGTATTTATGACAGAAATGGTGTGCTTCTTGCCTATAATGACTTATCT TATGCCGTTAAAATAAGTGATTCAGGCAGATATTCAGATAATGCTGTAAAAAATAAAACTATTAATAATTCAATAGATAA AACATTAACTATTATTGAAACGAATGGAGATACTTATTCTAATGATCTTCCAATTATCTATAATAATGGACAGTTTTCGT ATAATGTTGAAGGAACCTCGCTTTTAAGGTTTTTAAGAGATTCTTATGGAACTGAGTCGATTGCAGCTTTAAGTGATGAA CAGAAAGCTACATCTGCAGAGAATATGTTTAAATATCTCTGTGAAGTATACAGCATCAATTATGAAGAGTTTGGAATTGA ACACTCTTTGATGATGGTTAATCTTAGAAGATATATGGCTGCCAATTCGTATAACAGATATCTTACATTTATTATTGCAA ATGAAGTATCTGACAAGACAGTTGCAGCTATATTAGAAAACAGTGATGAGCTTGTAGGTGTTACGGTAGAAGAACAGTAT ATCAGAAGATATGTCGACAGTGTCTATTGCTCACAGATTCTAGGATATACCGGTACTGTTTCTAATGCAGAACTTGAAGA ACTTGGAGATGGATATGAAAGCAATGATATTGTAGGCAAGTCCGGTATTGAAAAGAGTATGGAAAGTGAGTTGTCAGGTT CTAAGGGAGAAAAATCAGTATATGTTGATACTGTTGGAAGAATTACAGAAGTGCTTGATGAGGAAGATCCACAGGCAGGA CATGATGTATATCTTACAATTGATATTAATCTTCAGAAATCTATTTATCATGCAATTGAAGACGAAATAACCAGTATTTT TATGCAGTATTTTACGCCGGGAAATAATAAGATAACATATAATGGTTCAGGTGATGTTGATACTATATATATAACAGCTC AGGAAGTATATTTTGCGCTTATTGATAATAACCTGGTTTCTTTAAAGCAGATACAGGAGCAGAATACAGCTAATGAAGCT GAGATATACAGTCAGTTTGAGACTAAGAAATCAGAGACTCTTTCATGGTTGAAGGATGAGCTTACTTCTGGTGATACTGC ATATGGAAAGTTATCAGAAGAGCAGAAACTGTATATATGGTATATCTATGATCTTTTAAGAAGTGAGAATATATTCAGTC TTGCAAATGTTGATACAAGTGACAGTGTTTATTATGACTGGATATATGGAGATTCGACAAGTCTTTCACAGCTTCTTACT TATGGTATATCTAAGAACTGGATTAATATGTCATCACTTACATCTGAGAAATATACGAGTCTTCAGGAGTCATATGATGC GCTTGTTGATTATGTTATATCAGCGCTTGATTCAGATACTGCATTTTTTAAGAAGATGTATAAGTACATGATTAATGCAG GCAGCATATCGGGCAGACAGGTGTGTATGTTATTATATGAGCAGGGTGTTCTTGATATTAATGCTGATGATTCAAAATAT CAGGCTCTGGTATCTGGAAGCATGGGAGCATATGAATTTATGTCATATATTGTTTCTAATAAAATTATAACTGTTGGACA GCTTGCTCTTAAGCCTTGTTCTGGTTCTGCTGTTGTAACTAATCCAAACAATGGTGATATTCTGGCACTTGTATCTTATC CTAGTTATGATAATAATAAATTGTCAGGAACGGTTGATGCCAAATATTACAATTCTCTTGTAAGTGATAATGCGAGTCCG CTTCTTAACCGGGCAACACAGTCATTTATAGCACCAGGTTCTACTTATAAACCTTGCACAATTATTGCTGGTATTGACAC CGGCATAATATCATCATCTACTACATTTAATTGCTCTGGTGTGTTTGATAAGGTAACTCCTTCACCTAGATGCTGGCAGA AATGGGGACATGGAAGTGAAACCCCTGTTACTGCAATCAGGGATTCATGTAATGTTTATATGTATAATGTTGGATATAAT CTTGCATGCAGCAAAAATGGTTCGTATAATAGTACTTACGGAACTAATGTATTAAAAAAATATTCTGATATGCTTGGTCT TTCTACAAAGTCAGGAATAGAGATAGAAGAAGGAACTCCTGGAGCTTCTTCGCAGAATGCAATTGCATCTGCAATCGGAC AGGGTAACCACAGATACAGTACACTTAATCTTGCAAGATATGTTACAACTCTGGCAACATCAGGAACATGTTATAATCTT ACACTTATTGATAAAATAACTGATTATGATGGTAATGTTTTAAGGGATAACAGTGCTGAGGTTAATAATAAAGTTGAGTT AAGTTCTGATATCTGGAATACAGTTCATACAGGTATGAATCTTGCTGCAGGAACTTATTCAGCATTTTCATCATTGAAAA TGTCAATTGCTGCAAAGACAGGTACTGCACAGGAAAAAACTACTGATCCTGACCATGCAACACTAATTACCTATGCGCCA TATGAAAATCCTGAATATTGTATGGCAGTGCGTATCCAGAATGGTTATGCTTCAGGAAATGCTGTAACACTTGGTGCAGA TATTTATAAAATGCTTTTTAATATTAGTGATTAA
Upstream 100 bases:
>100_bases GTATATACAGCACTTGTTTCGTTATTGGTGTATCATCCGATACATTATTTGTGTGTTATAACGCAGCAGGGAAGAGAAAG AAAAAAGAAGGGTAAGATTG
Downstream 100 bases:
>100_bases TATGTACTAAAGAAATGATAATATGATATGAGAGGTGAATGTTTTGGATAATTCAGTAATAATCAAAGGAAGTAAGAATG GAATTACAGTATTTCTTGAT
Product: penicillin binding protein 2
Products: NA
Alternate protein names: PBP-2 [H]
Number of amino acids: Translated: 917; Mature: 917
Protein sequence:
>917_residues MKEVFEYIVSLLKSRIFPMILVFIIMISILVHRLFVLQIVNGDSYVEDLSSSIKKDMSVVAARGRIYDRNGVLLAYNDLS YAVKISDSGRYSDNAVKNKTINNSIDKTLTIIETNGDTYSNDLPIIYNNGQFSYNVEGTSLLRFLRDSYGTESIAALSDE QKATSAENMFKYLCEVYSINYEEFGIEHSLMMVNLRRYMAANSYNRYLTFIIANEVSDKTVAAILENSDELVGVTVEEQY IRRYVDSVYCSQILGYTGTVSNAELEELGDGYESNDIVGKSGIEKSMESELSGSKGEKSVYVDTVGRITEVLDEEDPQAG HDVYLTIDINLQKSIYHAIEDEITSIFMQYFTPGNNKITYNGSGDVDTIYITAQEVYFALIDNNLVSLKQIQEQNTANEA EIYSQFETKKSETLSWLKDELTSGDTAYGKLSEEQKLYIWYIYDLLRSENIFSLANVDTSDSVYYDWIYGDSTSLSQLLT YGISKNWINMSSLTSEKYTSLQESYDALVDYVISALDSDTAFFKKMYKYMINAGSISGRQVCMLLYEQGVLDINADDSKY QALVSGSMGAYEFMSYIVSNKIITVGQLALKPCSGSAVVTNPNNGDILALVSYPSYDNNKLSGTVDAKYYNSLVSDNASP LLNRATQSFIAPGSTYKPCTIIAGIDTGIISSSTTFNCSGVFDKVTPSPRCWQKWGHGSETPVTAIRDSCNVYMYNVGYN LACSKNGSYNSTYGTNVLKKYSDMLGLSTKSGIEIEEGTPGASSQNAIASAIGQGNHRYSTLNLARYVTTLATSGTCYNL TLIDKITDYDGNVLRDNSAEVNNKVELSSDIWNTVHTGMNLAAGTYSAFSSLKMSIAAKTGTAQEKTTDPDHATLITYAP YENPEYCMAVRIQNGYASGNAVTLGADIYKMLFNISD
Sequences:
>Translated_917_residues MKEVFEYIVSLLKSRIFPMILVFIIMISILVHRLFVLQIVNGDSYVEDLSSSIKKDMSVVAARGRIYDRNGVLLAYNDLS YAVKISDSGRYSDNAVKNKTINNSIDKTLTIIETNGDTYSNDLPIIYNNGQFSYNVEGTSLLRFLRDSYGTESIAALSDE QKATSAENMFKYLCEVYSINYEEFGIEHSLMMVNLRRYMAANSYNRYLTFIIANEVSDKTVAAILENSDELVGVTVEEQY IRRYVDSVYCSQILGYTGTVSNAELEELGDGYESNDIVGKSGIEKSMESELSGSKGEKSVYVDTVGRITEVLDEEDPQAG HDVYLTIDINLQKSIYHAIEDEITSIFMQYFTPGNNKITYNGSGDVDTIYITAQEVYFALIDNNLVSLKQIQEQNTANEA EIYSQFETKKSETLSWLKDELTSGDTAYGKLSEEQKLYIWYIYDLLRSENIFSLANVDTSDSVYYDWIYGDSTSLSQLLT YGISKNWINMSSLTSEKYTSLQESYDALVDYVISALDSDTAFFKKMYKYMINAGSISGRQVCMLLYEQGVLDINADDSKY QALVSGSMGAYEFMSYIVSNKIITVGQLALKPCSGSAVVTNPNNGDILALVSYPSYDNNKLSGTVDAKYYNSLVSDNASP LLNRATQSFIAPGSTYKPCTIIAGIDTGIISSSTTFNCSGVFDKVTPSPRCWQKWGHGSETPVTAIRDSCNVYMYNVGYN LACSKNGSYNSTYGTNVLKKYSDMLGLSTKSGIEIEEGTPGASSQNAIASAIGQGNHRYSTLNLARYVTTLATSGTCYNL TLIDKITDYDGNVLRDNSAEVNNKVELSSDIWNTVHTGMNLAAGTYSAFSSLKMSIAAKTGTAQEKTTDPDHATLITYAP YENPEYCMAVRIQNGYASGNAVTLGADIYKMLFNISD >Mature_917_residues MKEVFEYIVSLLKSRIFPMILVFIIMISILVHRLFVLQIVNGDSYVEDLSSSIKKDMSVVAARGRIYDRNGVLLAYNDLS YAVKISDSGRYSDNAVKNKTINNSIDKTLTIIETNGDTYSNDLPIIYNNGQFSYNVEGTSLLRFLRDSYGTESIAALSDE QKATSAENMFKYLCEVYSINYEEFGIEHSLMMVNLRRYMAANSYNRYLTFIIANEVSDKTVAAILENSDELVGVTVEEQY IRRYVDSVYCSQILGYTGTVSNAELEELGDGYESNDIVGKSGIEKSMESELSGSKGEKSVYVDTVGRITEVLDEEDPQAG HDVYLTIDINLQKSIYHAIEDEITSIFMQYFTPGNNKITYNGSGDVDTIYITAQEVYFALIDNNLVSLKQIQEQNTANEA EIYSQFETKKSETLSWLKDELTSGDTAYGKLSEEQKLYIWYIYDLLRSENIFSLANVDTSDSVYYDWIYGDSTSLSQLLT YGISKNWINMSSLTSEKYTSLQESYDALVDYVISALDSDTAFFKKMYKYMINAGSISGRQVCMLLYEQGVLDINADDSKY QALVSGSMGAYEFMSYIVSNKIITVGQLALKPCSGSAVVTNPNNGDILALVSYPSYDNNKLSGTVDAKYYNSLVSDNASP LLNRATQSFIAPGSTYKPCTIIAGIDTGIISSSTTFNCSGVFDKVTPSPRCWQKWGHGSETPVTAIRDSCNVYMYNVGYN LACSKNGSYNSTYGTNVLKKYSDMLGLSTKSGIEIEEGTPGASSQNAIASAIGQGNHRYSTLNLARYVTTLATSGTCYNL TLIDKITDYDGNVLRDNSAEVNNKVELSSDIWNTVHTGMNLAAGTYSAFSSLKMSIAAKTGTAQEKTTDPDHATLITYAP YENPEYCMAVRIQNGYASGNAVTLGADIYKMLFNISD
Specific function: Cell wall formation; PBP-2 is responsible for the determination of the rod shape of the cell. Its synthesize cross- linked peptidoglycan from the lipid intermediates [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell inner membrane [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI1786854, Length=348, Percent_Identity=27.2988505747126, Blast_Score=124, Evalue=3e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005311 - InterPro: IPR001460 - InterPro: IPR017790 [H]
Pfam domain/function: PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 101599; Mature: 101599
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEVFEYIVSLLKSRIFPMILVFIIMISILVHRLFVLQIVNGDSYVEDLSSSIKKDMSVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH AARGRIYDRNGVLLAYNDLSYAVKISDSGRYSDNAVKNKTINNSIDKTLTIIETNGDTYS HHCCEEEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC NDLPIIYNNGQFSYNVEGTSLLRFLRDSYGTESIAALSDEQKATSAENMFKYLCEVYSIN CCCCEEECCCEEEEECCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC YEEFGIEHSLMMVNLRRYMAANSYNRYLTFIIANEVSDKTVAAILENSDELVGVTVEEQY HHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEHHHH IRRYVDSVYCSQILGYTGTVSNAELEELGDGYESNDIVGKSGIEKSMESELSGSKGEKSV HHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEE YVDTVGRITEVLDEEDPQAGHDVYLTIDINLQKSIYHAIEDEITSIFMQYFTPGNNKITY EEHHHHHHHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE NGSGDVDTIYITAQEVYFALIDNNLVSLKQIQEQNTANEAEIYSQFETKKSETLSWLKDE CCCCCEEEEEEEHHHEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LTSGDTAYGKLSEEQKLYIWYIYDLLRSENIFSLANVDTSDSVYYDWIYGDSTSLSQLLT HCCCCCCCCCCCCCCEEEEEEEEHHHCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHH YGISKNWINMSSLTSEKYTSLQESYDALVDYVISALDSDTAFFKKMYKYMINAGSISGRQ HCCCCCCEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHH VCMLLYEQGVLDINADDSKYQALVSGSMGAYEFMSYIVSNKIITVGQLALKPCSGSAVVT HHHEEHHCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHEEECCCCCCEEEE NPNNGDILALVSYPSYDNNKLSGTVDAKYYNSLVSDNASPLLNRATQSFIAPGSTYKPCT CCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEE IIAGIDTGIISSSTTFNCSGVFDKVTPSPRCWQKWGHGSETPVTAIRDSCNVYMYNVGYN EEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCEEEEECCEE LACSKNGSYNSTYGTNVLKKYSDMLGLSTKSGIEIEEGTPGASSQNAIASAIGQGNHRYS EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCEEE TLNLARYVTTLATSGTCYNLTLIDKITDYDGNVLRDNSAEVNNKVELSSDIWNTVHTGMN HHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCCCCCCCEEEECHHHHHHHHCCCC LAAGTYSAFSSLKMSIAAKTGTAQEKTTDPDHATLITYAPYENPEYCMAVRIQNGYASGN CCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCC AVTLGADIYKMLFNISD EEEECHHHHHHHHCCCC >Mature Secondary Structure MKEVFEYIVSLLKSRIFPMILVFIIMISILVHRLFVLQIVNGDSYVEDLSSSIKKDMSVV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHH AARGRIYDRNGVLLAYNDLSYAVKISDSGRYSDNAVKNKTINNSIDKTLTIIETNGDTYS HHCCEEEECCCEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC NDLPIIYNNGQFSYNVEGTSLLRFLRDSYGTESIAALSDEQKATSAENMFKYLCEVYSIN CCCCEEECCCEEEEECCHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHCC YEEFGIEHSLMMVNLRRYMAANSYNRYLTFIIANEVSDKTVAAILENSDELVGVTVEEQY HHHHCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHCCCCCEEEEEEHHHH IRRYVDSVYCSQILGYTGTVSNAELEELGDGYESNDIVGKSGIEKSMESELSGSKGEKSV HHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEE YVDTVGRITEVLDEEDPQAGHDVYLTIDINLQKSIYHAIEDEITSIFMQYFTPGNNKITY EEHHHHHHHHHHCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE NGSGDVDTIYITAQEVYFALIDNNLVSLKQIQEQNTANEAEIYSQFETKKSETLSWLKDE CCCCCEEEEEEEHHHEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH LTSGDTAYGKLSEEQKLYIWYIYDLLRSENIFSLANVDTSDSVYYDWIYGDSTSLSQLLT HCCCCCCCCCCCCCCEEEEEEEEHHHCCCCEEEEECCCCCCCEEEEEEECCCHHHHHHHH YGISKNWINMSSLTSEKYTSLQESYDALVDYVISALDSDTAFFKKMYKYMINAGSISGRQ HCCCCCCEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHH VCMLLYEQGVLDINADDSKYQALVSGSMGAYEFMSYIVSNKIITVGQLALKPCSGSAVVT HHHEEHHCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHCCCEEEEHEEECCCCCCEEEE NPNNGDILALVSYPSYDNNKLSGTVDAKYYNSLVSDNASPLLNRATQSFIAPGSTYKPCT CCCCCCEEEEEECCCCCCCCCCEEECHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEE IIAGIDTGIISSSTTFNCSGVFDKVTPSPRCWQKWGHGSETPVTAIRDSCNVYMYNVGYN EEEECCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHCCCCCCEEEEECCEE LACSKNGSYNSTYGTNVLKKYSDMLGLSTKSGIEIEEGTPGASSQNAIASAIGQGNHRYS EEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHCCCCCEEE TLNLARYVTTLATSGTCYNLTLIDKITDYDGNVLRDNSAEVNNKVELSSDIWNTVHTGMN HHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCEEECCCCCCCCEEEECHHHHHHHHCCCC LAAGTYSAFSSLKMSIAAKTGTAQEKTTDPDHATLITYAPYENPEYCMAVRIQNGYASGN CCCCHHHHHHHHEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCC AVTLGADIYKMLFNISD EEEECHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]