| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916907
Identifier: 238916907
GI number: 238916907
Start: 990113
End: 990670
Strand: Direct
Name: 238916907
Synonym: EUBELI_00976
Alternate gene names: NA
Gene position: 990113-990670 (Clockwise)
Preceding gene: 238916906
Following gene: 238916908
Centisome position: 46.18
GC content: 31.54
Gene sequence:
>558_bases ATGGCTAAATTTACGAAAAAAGCAATAATGGACTGTTTTCTTAATATGCTAAAGCGTAAGAATATTGACAGGGTAACGGT TACAGATATATGTGAGGAATGTGGAATTAACAGGAATACATTTTATTATTATTTCAGTGATATATATGATGTGCTTGACA GTGTTCTTATAGAAGAGACAGAAAAGAATATTAATATTACGGAAGATGCAACTTTTTATGAGACATATAGTAAGGCAGCT TCTGTTATTATTGAGTATCGTGCAGCAGTTATTCATGTGTATAATTCCAGGAACAGGGATATTATTGAGAAATATCTGCA TAATACAACAGAATATCTTGTTGGACTTTTTGTTAAGAAATATTCTAAAGACCATAAGCTTACAGAAGATGACAGAGAGT ATATAACAAGCTTTTACAGCTATTCTATTGTTGGAATTGTGTCAAGATGGATAGGCGATGGAATGCCGCCATATGATAAA GATCTTATTAAGCGTTTTTCTGAATCATTTGATGCAACGATTGATACAATGATTAATCTGTGTGAAGCTAATAATTAG
Upstream 100 bases:
>100_bases AATATATGAAACAAGGGCAGGCGGCGTTATATCTTCTCATTGTGGTCCGGGAACATTAGGAGTTCTTTTTATTGCAGGTG AGTAATTTCAGGAGAAATGT
Downstream 100 bases:
>100_bases TTATTAAAAACAGACAAAACATGTAAAGTGTTCGATTTTGGGACAAAGTACATGCTTTGCCTGTTTTTTTATTTAGAGAA AAAATGTATGCTAAATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MAKFTKKAIMDCFLNMLKRKNIDRVTVTDICEECGINRNTFYYYFSDIYDVLDSVLIEETEKNINITEDATFYETYSKAA SVIIEYRAAVIHVYNSRNRDIIEKYLHNTTEYLVGLFVKKYSKDHKLTEDDREYITSFYSYSIVGIVSRWIGDGMPPYDK DLIKRFSESFDATIDTMINLCEANN
Sequences:
>Translated_185_residues MAKFTKKAIMDCFLNMLKRKNIDRVTVTDICEECGINRNTFYYYFSDIYDVLDSVLIEETEKNINITEDATFYETYSKAA SVIIEYRAAVIHVYNSRNRDIIEKYLHNTTEYLVGLFVKKYSKDHKLTEDDREYITSFYSYSIVGIVSRWIGDGMPPYDK DLIKRFSESFDATIDTMINLCEANN >Mature_184_residues AKFTKKAIMDCFLNMLKRKNIDRVTVTDICEECGINRNTFYYYFSDIYDVLDSVLIEETEKNINITEDATFYETYSKAAS VIIEYRAAVIHVYNSRNRDIIEKYLHNTTEYLVGLFVKKYSKDHKLTEDDREYITSFYSYSIVGIVSRWIGDGMPPYDKD LIKRFSESFDATIDTMINLCEANN
Specific function: Unknown
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21740; Mature: 21609
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKFTKKAIMDCFLNMLKRKNIDRVTVTDICEECGINRNTFYYYFSDIYDVLDSVLIEET CCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH EKNINITEDATFYETYSKAASVIIEYRAAVIHVYNSRNRDIIEKYLHNTTEYLVGLFVKK HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YSKDHKLTEDDREYITSFYSYSIVGIVSRWIGDGMPPYDKDLIKRFSESFDATIDTMINL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CEANN HHCCC >Mature Secondary Structure AKFTKKAIMDCFLNMLKRKNIDRVTVTDICEECGINRNTFYYYFSDIYDVLDSVLIEET CHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH EKNINITEDATFYETYSKAASVIIEYRAAVIHVYNSRNRDIIEKYLHNTTEYLVGLFVKK HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH YSKDHKLTEDDREYITSFYSYSIVGIVSRWIGDGMPPYDKDLIKRFSESFDATIDTMINL HCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH CEANN HHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA