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The map label for this gene is rpiR [C]

Identifier: 238916857

GI number: 238916857

Start: 941406

End: 942356

Strand: Direct

Name: rpiR [C]

Synonym: EUBELI_00926

Alternate gene names: 238916857

Gene position: 941406-942356 (Clockwise)

Preceding gene: 238916856

Following gene: 238916858

Centisome position: 43.9

GC content: 35.65

Gene sequence:

>951_bases
ATGAATGATTTAGAACAACATACAGATGTATTAAGTCTCATAAGAGTGAGAATGTCAGGACTTAGCAAGGGACATAAAAG
AATAGCAGAGTATATTCTGGCTAATTATGAAAAATGTGCATTCCTTACTGCGGCAAAGCTGGGAGAAGTTGTTGGAGTAA
GTGAGTCTACGGCGGTGAGATTTCCGGCTGCATTGGGATTTTCCGGGTATCCGGAGTTCCAGAAAGCGTTAGAAGACATT
TTGCAAGAAAAAATTCACTCGTTCGACAGAATTGATGTGCTTAATTCACATATGACAACCAATATGGTCGTGAATAATGT
TATGTCAATGGATGCAAGAAAGATAGAGCATACATTAAAGTCATTTGATACAACATCTTTTGATATGGCTGTTGAGGATA
TAATGGCTGCAGAAAGTGTGTATATAATTGGAGCAAGATCGTGCGAACCACTCGCAGAATTCTTTGGGTATTATCTTAGG
ATGGTCAAGAAAAATGTACAGGTAGTAAAGACTGGCAATACTAACGAATTGTTTGAACAGATGATGTACATAGGTGAAGG
CGATGTTGCAATAGGTATCAGCTTTCCCAGATATTCAATGAGAACGCTTAAAGCAATGGAATTTGCTAATAACAGACAGG
CAAGAGTTATATCAATAACAGATTCAGTACACTCACCAATGAATATGTATTCATCATGTAACCTGTTTGCAAGAAGTGAT
ATGGCATCAATAGTTGATTCACTTGTTGCACCAATGAGCCTTATTAATGCTTTAATAGTATCAATATGTCTTAAGAATAG
TGAACAGGTAGTAGAAAATATTGAGAAAATAAACGCATTTGTTGATAATTTTGAGTATTCAGGCAATGACGAGATTAATA
TGTTAGATGAGAATGTTGTTAATGAATTGAAAAAATGCATGGATAATGCAGCTATTGATGAAGAAAAGTAA

Upstream 100 bases:

>100_bases
GGAATATATTATTCTAGAAAGGGTCATAAGCTTGCAGAGTGGCATACCTTCTGTGACTGGGTAAAAGAACTGCCATATTT
TGAAGAGCTTTTTATAGATA

Downstream 100 bases:

>100_bases
GAGAGAGTGATAATGAGCAATGTTATAATAATTGGCGGTGGTGCAGCAGGAATGATGGCTGCGATAACTGCTGCCAGAAA
CAATAATAAGGTTACACTTA

Product: N-acylmannosamine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNDLEQHTDVLSLIRVRMSGLSKGHKRIAEYILANYEKCAFLTAAKLGEVVGVSESTAVRFPAALGFSGYPEFQKALEDI
LQEKIHSFDRIDVLNSHMTTNMVVNNVMSMDARKIEHTLKSFDTTSFDMAVEDIMAAESVYIIGARSCEPLAEFFGYYLR
MVKKNVQVVKTGNTNELFEQMMYIGEGDVAIGISFPRYSMRTLKAMEFANNRQARVISITDSVHSPMNMYSSCNLFARSD
MASIVDSLVAPMSLINALIVSICLKNSEQVVENIEKINAFVDNFEYSGNDEINMLDENVVNELKKCMDNAAIDEEK

Sequences:

>Translated_316_residues
MNDLEQHTDVLSLIRVRMSGLSKGHKRIAEYILANYEKCAFLTAAKLGEVVGVSESTAVRFPAALGFSGYPEFQKALEDI
LQEKIHSFDRIDVLNSHMTTNMVVNNVMSMDARKIEHTLKSFDTTSFDMAVEDIMAAESVYIIGARSCEPLAEFFGYYLR
MVKKNVQVVKTGNTNELFEQMMYIGEGDVAIGISFPRYSMRTLKAMEFANNRQARVISITDSVHSPMNMYSSCNLFARSD
MASIVDSLVAPMSLINALIVSICLKNSEQVVENIEKINAFVDNFEYSGNDEINMLDENVVNELKKCMDNAAIDEEK
>Mature_316_residues
MNDLEQHTDVLSLIRVRMSGLSKGHKRIAEYILANYEKCAFLTAAKLGEVVGVSESTAVRFPAALGFSGYPEFQKALEDI
LQEKIHSFDRIDVLNSHMTTNMVVNNVMSMDARKIEHTLKSFDTTSFDMAVEDIMAAESVYIIGARSCEPLAEFFGYYLR
MVKKNVQVVKTGNTNELFEQMMYIGEGDVAIGISFPRYSMRTLKAMEFANNRQARVISITDSVHSPMNMYSSCNLFARSD
MASIVDSLVAPMSLINALIVSICLKNSEQVVENIEKINAFVDNFEYSGNDEINMLDENVVNELKKCMDNAAIDEEK

Specific function: Regulatory Protein Involved In Rpib Gene Repression. Also Involved In Als Operon Repression. [C]

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI87082369, Length=285, Percent_Identity=24.9122807017544, Blast_Score=65, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 35467; Mature: 35467

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDLEQHTDVLSLIRVRMSGLSKGHKRIAEYILANYEKCAFLTAAKLGEVVGVSESTAVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEE
FPAALGFSGYPEFQKALEDILQEKIHSFDRIDVLNSHMTTNMVVNNVMSMDARKIEHTLK
CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFDTTSFDMAVEDIMAAESVYIIGARSCEPLAEFFGYYLRMVKKNVQVVKTGNTNELFEQ
HCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
MMYIGEGDVAIGISFPRYSMRTLKAMEFANNRQARVISITDSVHSPMNMYSSCNLFARSD
HHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECHHHCCHHHHHHHCCHHHHHH
MASIVDSLVAPMSLINALIVSICLKNSEQVVENIEKINAFVDNFEYSGNDEINMLDENVV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
NELKKCMDNAAIDEEK
HHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNDLEQHTDVLSLIRVRMSGLSKGHKRIAEYILANYEKCAFLTAAKLGEVVGVSESTAVR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEE
FPAALGFSGYPEFQKALEDILQEKIHSFDRIDVLNSHMTTNMVVNNVMSMDARKIEHTLK
CCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SFDTTSFDMAVEDIMAAESVYIIGARSCEPLAEFFGYYLRMVKKNVQVVKTGNTNELFEQ
HCCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCCHHHHHHH
MMYIGEGDVAIGISFPRYSMRTLKAMEFANNRQARVISITDSVHSPMNMYSSCNLFARSD
HHHCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEEECHHHCCHHHHHHHCCHHHHHH
MASIVDSLVAPMSLINALIVSICLKNSEQVVENIEKINAFVDNFEYSGNDEINMLDENVV
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
NELKKCMDNAAIDEEK
HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]