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The map label for this gene is yvyF [H]

Identifier: 238916836

GI number: 238916836

Start: 914829

End: 915344

Strand: Direct

Name: yvyF [H]

Synonym: EUBELI_00904

Alternate gene names: 238916836

Gene position: 914829-915344 (Clockwise)

Preceding gene: 238916835

Following gene: 238916839

Centisome position: 42.67

GC content: 35.08

Gene sequence:

>516_bases
ATGGAATCATCATTAAGAGAAATAGAACAAAGAGAAAAAATGAAAAAAGAAAAAAGGCATATAGAAACAATGATTAAGTA
TGAACGTGCAAAGATATGTCCAAAATGCGGAGAACTTATGAGATATGCATTTGGAGAGGTTTTTAAGTGTGATCATTGTG
GCCAGGAAGAACTTACATCATTTGGTAAGGTAAGAAAGTACATTGAAGAAAATGGACCTTCAAATGCATCTAATATTTCA
CGAGGAACCGGAGTCCCTGTATCAATTATCAATAAGTATTTAAGAGAAGGAAGAATTGAGATTCCTGATGGCTCAGATAG
TTATATAAAATGTGAGGACTGTGGTGCGGATATCAGATATGGAAGATATTGCCCGGCATGTGCAGCAAAGCATAATAAAG
ACCAGAATGTTGGTATATTTAATTCAGAGGCAGGAGAAGTGCCAAAGCATAAGAGAGATGCATATGGTAAGATGCATACT
CTTGATGTAATGGAAAAGACAAGGAATAAAAAGTAA

Upstream 100 bases:

>100_bases
AAGAATGACGGAACATATAAAGACAGAGCAATTAATCGGGTTGGAAAGACGGAGAGAAGAGATATATTCAGAGAAGCAGT
GAGCGGAAAGAAGGTTTAAT

Downstream 100 bases:

>100_bases
TAAGAGATATAATAAAAAGCCGTTACCACAAATATTGTGGCAGCGGCTTTTATCTTTTCGGGTACTAATTAAAGATCAAA
TCCAAAGTATCTTACAGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MESSLREIEQREKMKKEKRHIETMIKYERAKICPKCGELMRYAFGEVFKCDHCGQEELTSFGKVRKYIEENGPSNASNIS
RGTGVPVSIINKYLREGRIEIPDGSDSYIKCEDCGADIRYGRYCPACAAKHNKDQNVGIFNSEAGEVPKHKRDAYGKMHT
LDVMEKTRNKK

Sequences:

>Translated_171_residues
MESSLREIEQREKMKKEKRHIETMIKYERAKICPKCGELMRYAFGEVFKCDHCGQEELTSFGKVRKYIEENGPSNASNIS
RGTGVPVSIINKYLREGRIEIPDGSDSYIKCEDCGADIRYGRYCPACAAKHNKDQNVGIFNSEAGEVPKHKRDAYGKMHT
LDVMEKTRNKK
>Mature_171_residues
MESSLREIEQREKMKKEKRHIETMIKYERAKICPKCGELMRYAFGEVFKCDHCGQEELTSFGKVRKYIEENGPSNASNIS
RGTGVPVSIINKYLREGRIEIPDGSDSYIKCEDCGADIRYGRYCPACAAKHNKDQNVGIFNSEAGEVPKHKRDAYGKMHT
LDVMEKTRNKK

Specific function: May be involved in the assembly, structure, or function of the flagellum. May polymerize to form a filamentous structure that is part of the flagellum [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To S.typhimurium fliF [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022258 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19604; Mature: 19604

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESSLREIEQREKMKKEKRHIETMIKYERAKICPKCGELMRYAFGEVFKCDHCGQEELTS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHH
FGKVRKYIEENGPSNASNISRGTGVPVSIINKYLREGRIEIPDGSDSYIKCEDCGADIRY
HHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCC
GRYCPACAAKHNKDQNVGIFNSEAGEVPKHKRDAYGKMHTLDVMEKTRNKK
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MESSLREIEQREKMKKEKRHIETMIKYERAKICPKCGELMRYAFGEVFKCDHCGQEELTS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHH
FGKVRKYIEENGPSNASNISRGTGVPVSIINKYLREGRIEIPDGSDSYIKCEDCGADIRY
HHHHHHHHHHCCCCCCHHCCCCCCCCHHHHHHHHHCCCEECCCCCCCEEEECCCCCCCCC
GRYCPACAAKHNKDQNVGIFNSEAGEVPKHKRDAYGKMHTLDVMEKTRNKK
CCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8045879; 9384377 [H]