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The map label for this gene is cheD [H]

Identifier: 238916776

GI number: 238916776

Start: 852522

End: 853013

Strand: Direct

Name: cheD [H]

Synonym: EUBELI_00838

Alternate gene names: 238916776

Gene position: 852522-853013 (Clockwise)

Preceding gene: 238916775

Following gene: 238916777

Centisome position: 39.76

GC content: 38.21

Gene sequence:

>492_bases
ATGATTATGGGAAGTATGATAAAGGTAGGCATGGCTGATTTAAAGGCATGTAAATGCCCTGATTCTCTTACAACATTGGG
ATTGGGCTCATGTGTAGGCGTTGCATTATATGATCCGGTAACAAAAGTGAGTGGACTGTTGCACTGTATGTTACCGGATA
GTACCCAGTTTAGAAATAATACCAATGTTGCTAAGTTTGCAGATACTGGTATAGATGAACTGATAAAACAGATGAAATCT
TTAGGAGCTAATGACAGCAGGCTTGTAGCTAAGATAGCCGGTGGTGCACAGATGTTTGCAAACAGGACTAATAGCGAAGC
TTTAAGAGTAGGGGAACGCAATGTTATTGCGGTAAAACAAAAATTAAAAAGTCTCAATATAAGAATTCTGTCACAGGATT
GTGGTGAAAATTTTGGTAGAACAGTGGAGTTTTATTCGGAGACAGGTGATTATGTTATTAAAGCAGTAGGTAAACCGCAG
AAAGCTATATAA

Upstream 100 bases:

>100_bases
ACTGGATTTTGTTAATGGATATTTCCTTATGATTCCTGAACTTAATTCATATGACAAGTTGTTAGAGTCGTTAGGTGTGT
AGGATATTTTTGAAAGAGTT

Downstream 100 bases:

>100_bases
TTTATTATATGAACATGCTGATTGAATAATTGGAGGCTTTATGAATAAATTTAGAAATTTGCCGGCTCTGATTACATTGC
TGGCAGGATTTATAACCAGT

Product: chemotaxis protein CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MIMGSMIKVGMADLKACKCPDSLTTLGLGSCVGVALYDPVTKVSGLLHCMLPDSTQFRNNTNVAKFADTGIDELIKQMKS
LGANDSRLVAKIAGGAQMFANRTNSEALRVGERNVIAVKQKLKSLNIRILSQDCGENFGRTVEFYSETGDYVIKAVGKPQ
KAI

Sequences:

>Translated_163_residues
MIMGSMIKVGMADLKACKCPDSLTTLGLGSCVGVALYDPVTKVSGLLHCMLPDSTQFRNNTNVAKFADTGIDELIKQMKS
LGANDSRLVAKIAGGAQMFANRTNSEALRVGERNVIAVKQKLKSLNIRILSQDCGENFGRTVEFYSETGDYVIKAVGKPQ
KAI
>Mature_163_residues
MIMGSMIKVGMADLKACKCPDSLTTLGLGSCVGVALYDPVTKVSGLLHCMLPDSTQFRNNTNVAKFADTGIDELIKQMKS
LGANDSRLVAKIAGGAQMFANRTNSEALRVGERNVIAVKQKLKSLNIRILSQDCGENFGRTVEFYSETGDYVIKAVGKPQ
KAI

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 17534; Mature: 17534

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMGSMIKVGMADLKACKCPDSLTTLGLGSCVGVALYDPVTKVSGLLHCMLPDSTQFRNN
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHEEEECCCCCCCCCC
TNVAKFADTGIDELIKQMKSLGANDSRLVAKIAGGAQMFANRTNSEALRVGERNVIAVKQ
CCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCCCCHHHHCCCCCHHHHHH
KLKSLNIRILSQDCGENFGRTVEFYSETGDYVIKAVGKPQKAI
HHHHCCEEEECCHHCCCCCCEEEECCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MIMGSMIKVGMADLKACKCPDSLTTLGLGSCVGVALYDPVTKVSGLLHCMLPDSTQFRNN
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHEEEECCCCCCCCCC
TNVAKFADTGIDELIKQMKSLGANDSRLVAKIAGGAQMFANRTNSEALRVGERNVIAVKQ
CCHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHCCCCCHHHHCCCCCHHHHHH
KLKSLNIRILSQDCGENFGRTVEFYSETGDYVIKAVGKPQKAI
HHHHCCEEEECCHHCCCCCCEEEECCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA