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The map label for this gene is fliF [H]

Identifier: 238916746

GI number: 238916746

Start: 824310

End: 825920

Strand: Direct

Name: fliF [H]

Synonym: EUBELI_00808

Alternate gene names: 238916746

Gene position: 824310-825920 (Clockwise)

Preceding gene: 238916745

Following gene: 238916747

Centisome position: 38.44

GC content: 37.24

Gene sequence:

>1611_bases
ATGTTAGATAGATTGAAACAGATTCCAGCGCGACTTCTTGAAATATGGAAGAACTGGACAAGAAATCAGAAAATTATAAT
TGTAAGTGCGGTGGTTGTATTTATAGCAGCTGTTATCGTTATAGCATATGTTTTATCAAGACCTACATATCAGGAGCTTA
CCAAATGCGAAGATTACAGTGAGATGAATACAGTTACCACGCTGCTTACAGATAATGGATATACATATCAGATAAATAAT
ATGACTGTTAATGTTAAAAAGCAGGATTTAACTAATGCTAAAATGCTCATTGCATCTAATGACATTAAGCCTTCAGGATA
TTCACTTGATGATGCACTTAACAGTAGTCTTACTACGACGGAAGCTGACAAGAATAAAAAATATGCAAAGTATCTGGAAA
CAAAATTTGCAACGGATATAGCATCTCTTGATGGAATTAAGAAAGCTTCTGTTACAGTTCATCTTTCAGATGATACTAAT
TCTTTTTATTCAACGAAAAAAGATACCACTGTTGCTGTTACAGTTGATACAAGTAAGACTGTATCAGATGACGCTGCTGA
GAGCATAGCTGTATTTCTTGCAACAGCGGTTGGAAGCAGCACAACTAACGGAATAACAATTATTGATACGACAGGAAAGA
CTTTATTTAACGGTTCGGATAATTCGGGTTCAGTATCTAACATCTCATATTCCAGCAAGCTTAAGTATAAGTCACAGATT
GAGTCTACTGTTGCAGCCGGAGTTAAGAATACCGCTCTTTCAACATCTCTGTTTAATGATGCGACAGTTGCTATTAATCT
TGATCTTGACTGGGATACAGTTAATAAGATTGCAACTGAATATACAGCCCAGGAGGGAAGAGAAGAAGGCTTATACGATA
CTTCATATGAACTTGAATCGACAGGAAACAATGGAGCGGGTGGAACACCTGGAACTACAAGTAATGGCGAGGGTGGAACG
ACATACGATCTTACAGATGGAACATCAAGTTCTTCTACATATACTGTAAAACAGTATCAGTATCTTCCTAACCAGCTGGT
TACTACAACTAATACTGAACCAGGAAAAATAGTATATGATACATCTACTATGTCCGTTACTCTTATTAAGAATGTTGTAT
ATAACGAAGATGATTGCAAAAAGCTTGGATATCTCGATAACATGACATGGGATGAATTCAAGGCGCAGAACGCTGATCCT
GTTCAGGTACAGGTTAATGCTGACTGGATGAATATGCTTTCTAATGCAACCGGAATATCAACTAACAACATAACAGTGCT
TGCATATAATGTTCCATATTTTTATGATGCTGCTAAGACAAGTGTGTTAAGCAGAGCATCATTCTGGATACAGATTGCAC
TTGCAGTTGCAATTCTCGGTATACTTGTATTCATAGTTTTAAGAAGTGCAAGGCCTCTTACTGTAGAAGAAAAGGAGCCA
GAGCTTTCTGTAGAAGAAATGCTTGCTTCAACTAAAGAGAATCAGCCTACTGTTGATGAAATTGACCTTCAGGAGAAATC
TGAGACAAGAAAGGCTATTGAAAAATTCGTTGATGAGAACCCGGAAGCAGTTGCATTGCTGCTTAGAAACTGGCTTAATG
ATGACTGGTGA

Upstream 100 bases:

>100_bases
GAAGCTAATATTGCACTGCAATATACAGTTGCAATAAGAGATAAGGCATTGGAGGCCTATAACTCTATTATGAATATGTC
AATGTAAATAGGGGTTTTTT

Downstream 100 bases:

>100_bases
TAATTACTGGGGATAATTGAAAAAGATTAATACATATGATTGGAGATGATACATATGCCAAAGCCAACTGCAAGTAGTGA
GAGAGAAATGGATGGTGTGG

Product: flagellar M-ring protein FliF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MLDRLKQIPARLLEIWKNWTRNQKIIIVSAVVVFIAAVIVIAYVLSRPTYQELTKCEDYSEMNTVTTLLTDNGYTYQINN
MTVNVKKQDLTNAKMLIASNDIKPSGYSLDDALNSSLTTTEADKNKKYAKYLETKFATDIASLDGIKKASVTVHLSDDTN
SFYSTKKDTTVAVTVDTSKTVSDDAAESIAVFLATAVGSSTTNGITIIDTTGKTLFNGSDNSGSVSNISYSSKLKYKSQI
ESTVAAGVKNTALSTSLFNDATVAINLDLDWDTVNKIATEYTAQEGREEGLYDTSYELESTGNNGAGGTPGTTSNGEGGT
TYDLTDGTSSSSTYTVKQYQYLPNQLVTTTNTEPGKIVYDTSTMSVTLIKNVVYNEDDCKKLGYLDNMTWDEFKAQNADP
VQVQVNADWMNMLSNATGISTNNITVLAYNVPYFYDAAKTSVLSRASFWIQIALAVAILGILVFIVLRSARPLTVEEKEP
ELSVEEMLASTKENQPTVDEIDLQEKSETRKAIEKFVDENPEAVALLLRNWLNDDW

Sequences:

>Translated_536_residues
MLDRLKQIPARLLEIWKNWTRNQKIIIVSAVVVFIAAVIVIAYVLSRPTYQELTKCEDYSEMNTVTTLLTDNGYTYQINN
MTVNVKKQDLTNAKMLIASNDIKPSGYSLDDALNSSLTTTEADKNKKYAKYLETKFATDIASLDGIKKASVTVHLSDDTN
SFYSTKKDTTVAVTVDTSKTVSDDAAESIAVFLATAVGSSTTNGITIIDTTGKTLFNGSDNSGSVSNISYSSKLKYKSQI
ESTVAAGVKNTALSTSLFNDATVAINLDLDWDTVNKIATEYTAQEGREEGLYDTSYELESTGNNGAGGTPGTTSNGEGGT
TYDLTDGTSSSSTYTVKQYQYLPNQLVTTTNTEPGKIVYDTSTMSVTLIKNVVYNEDDCKKLGYLDNMTWDEFKAQNADP
VQVQVNADWMNMLSNATGISTNNITVLAYNVPYFYDAAKTSVLSRASFWIQIALAVAILGILVFIVLRSARPLTVEEKEP
ELSVEEMLASTKENQPTVDEIDLQEKSETRKAIEKFVDENPEAVALLLRNWLNDDW
>Mature_536_residues
MLDRLKQIPARLLEIWKNWTRNQKIIIVSAVVVFIAAVIVIAYVLSRPTYQELTKCEDYSEMNTVTTLLTDNGYTYQINN
MTVNVKKQDLTNAKMLIASNDIKPSGYSLDDALNSSLTTTEADKNKKYAKYLETKFATDIASLDGIKKASVTVHLSDDTN
SFYSTKKDTTVAVTVDTSKTVSDDAAESIAVFLATAVGSSTTNGITIIDTTGKTLFNGSDNSGSVSNISYSSKLKYKSQI
ESTVAAGVKNTALSTSLFNDATVAINLDLDWDTVNKIATEYTAQEGREEGLYDTSYELESTGNNGAGGTPGTTSNGEGGT
TYDLTDGTSSSSTYTVKQYQYLPNQLVTTTNTEPGKIVYDTSTMSVTLIKNVVYNEDDCKKLGYLDNMTWDEFKAQNADP
VQVQVNADWMNMLSNATGISTNNITVLAYNVPYFYDAAKTSVLSRASFWIQIALAVAILGILVFIVLRSARPLTVEEKEP
ELSVEEMLASTKENQPTVDEIDLQEKSETRKAIEKFVDENPEAVALLLRNWLNDDW

Specific function: The M ring may be actively involved in energy transduction [H]

COG id: COG1766

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliF family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013556
- InterPro:   IPR000067
- InterPro:   IPR006182 [H]

Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]

EC number: NA

Molecular weight: Translated: 58863; Mature: 58863

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDRLKQIPARLLEIWKNWTRNQKIIIVSAVVVFIAAVIVIAYVLSRPTYQELTKCEDYS
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
EMNTVTTLLTDNGYTYQINNMTVNVKKQDLTNAKMLIASNDIKPSGYSLDDALNSSLTTT
HHCEEEEEEECCCEEEEEECEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCC
EADKNKKYAKYLETKFATDIASLDGIKKASVTVHLSDDTNSFYSTKKDTTVAVTVDTSKT
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHCCCCCCEEEEEECCCCC
VSDDAAESIAVFLATAVGSSTTNGITIIDTTGKTLFNGSDNSGSVSNISYSSKLKYKSQI
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCEEECCCHHHCCHHHHH
ESTVAAGVKNTALSTSLFNDATVAINLDLDWDTVNKIATEYTAQEGREEGLYDTSYELES
HHHHHHCCHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
TGNNGAGGTPGTTSNGEGGTTYDLTDGTSSSSTYTVKQYQYLPNQLVTTTNTEPGKIVYD
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHCCCCEEEECCCCCCEEEEE
TSTMSVTLIKNVVYNEDDCKKLGYLDNMTWDEFKAQNADPVQVQVNADWMNMLSNATGIS
CCCEEEEEEHHHHCCCCHHHHHCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHCCCCCCC
TNNITVLAYNVPYFYDAAKTSVLSRASFWIQIALAVAILGILVFIVLRSARPLTVEEKEP
CCCEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
ELSVEEMLASTKENQPTVDEIDLQEKSETRKAIEKFVDENPEAVALLLRNWLNDDW
CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLDRLKQIPARLLEIWKNWTRNQKIIIVSAVVVFIAAVIVIAYVLSRPTYQELTKCEDYS
CCHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHH
EMNTVTTLLTDNGYTYQINNMTVNVKKQDLTNAKMLIASNDIKPSGYSLDDALNSSLTTT
HHCEEEEEEECCCEEEEEECEEEEEECCCCCCEEEEEEECCCCCCCCCHHHHHCCCCCCC
EADKNKKYAKYLETKFATDIASLDGIKKASVTVHLSDDTNSFYSTKKDTTVAVTVDTSKT
CCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHCCCCCCEEEEEECCCCC
VSDDAAESIAVFLATAVGSSTTNGITIIDTTGKTLFNGSDNSGSVSNISYSSKLKYKSQI
CCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCEEECCCHHHCCHHHHH
ESTVAAGVKNTALSTSLFNDATVAINLDLDWDTVNKIATEYTAQEGREEGLYDTSYELES
HHHHHHCCHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEC
TGNNGAGGTPGTTSNGEGGTTYDLTDGTSSSSTYTVKQYQYLPNQLVTTTNTEPGKIVYD
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEHHHHCCCCEEEECCCCCCEEEEE
TSTMSVTLIKNVVYNEDDCKKLGYLDNMTWDEFKAQNADPVQVQVNADWMNMLSNATGIS
CCCEEEEEEHHHHCCCCHHHHHCCCCCCCHHHHHCCCCCCEEEEECCHHHHHHCCCCCCC
TNNITVLAYNVPYFYDAAKTSVLSRASFWIQIALAVAILGILVFIVLRSARPLTVEEKEP
CCCEEEEEEECCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
ELSVEEMLASTKENQPTVDEIDLQEKSETRKAIEKFVDENPEAVALLLRNWLNDDW
CCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9858749; 11481430 [H]