| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is aroC
Identifier: 238916696
GI number: 238916696
Start: 767934
End: 769034
Strand: Direct
Name: aroC
Synonym: EUBELI_00758
Alternate gene names: 238916696
Gene position: 767934-769034 (Clockwise)
Preceding gene: 238916694
Following gene: 238916697
Centisome position: 35.81
GC content: 41.78
Gene sequence:
>1101_bases ATGGCAGGTTCAGTGTTTGGAAATATATTTAAGATATCAACATGGGGAGAGTCGCATGGAGAGGGACTTGGAGTTGTAAT TGACGGGTGTCCTGCAGGTCTGCCTCTTTGTGAGAAAGATATTCAGGAGCAGTTAGACAGAAGAAAACCAGGTCAGTCAA AGTTTACTACACCAAGAAAGGAAGATGATGAAGTACATATTCTTTCAGGTGTATTTGAAGGCAAGACTACCGGGACTCCA ATATCACTTGCCGTATATAATAAGACACAGAGGTCTGCTGACTATTCAGAGATAGCTAATTATTACAGACCGGGACATGC TGATTATACATTTGACGAGAAATTCGGATTCAGGGATTACAGAGGCGGAGGAAGAAGTTCTGGAAGAGAAACTATCGGAA GAGTTGCAGCCGGTGCAATCGCTATGAAGATTCTTAAAGAGCTTGGAATTAATATTACAGCATATGCTAAAGAAATCGGT GGAATTGGCATTGATTATGATAAGTTTGATATAGCTGAAAGAGATAATAACGCATTTAACATGCCTGATAAGGAAGCTGC AGAGAAGGTTAAGGCTTTTGCAGAGAGCAAGATGTCAGTTGGAGATTCAATCGGTGGTGTCATTGAATGCAGGGTTACAG GCATGATGACTGGAATTGGCAATCCTACATTTGAAAAGCTAGATGCTAATCTTGCTAAGGCAATAATGTCAATCGGGGCT GTCAAAGGCTTTGAGATTGGAGACGGGTTTGAAGCGGCTAAAGTTACAGGAAAGTATAATAATGATGAATTCGTAATGAA GGATGGCAGGGTTGGTAAGCTGACTAATCACAGCGGCGGAGTGCTTGGCGGAATAAGCGACGGTGATGAGATTGTGTTCA GGGCAGCGGTAAAACCGACACCTTCAATTAGTGCATTGCAGGAAACTGTTAATAAGCAGGGCGAGGATATCGAGGTTTCA ATCAAAGGAAGACATGACCCGATGATAGTTCCAAGAGCAGTTGTTGTGGTTGAAGCTATGACAGCACTTACACTTGTTGA CCTGATATTTGACAATATGACGGCTAGAATGGACAGAGTTAAAGAGTTTTATAGAAAATAA
Upstream 100 bases:
>100_bases AATAAAAATAAGAAAAAATTAATAAATTGGGGTTTTGCTTGATGATATATATTTTAATATGTTAAAATAAATCCTATTGA AAAGATGAGGAGAATATATT
Downstream 100 bases:
>100_bases AAGGAGCAGATATGTATAAAATTTTAAAGACAGATGGCAGGGCAAAAAGAGCAGAGTTCACAACAGTACATGGAACTGTG CAGACACCTGTATTTATGAA
Product: chorismate synthase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate phospholyase
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MAGSVFGNIFKISTWGESHGEGLGVVIDGCPAGLPLCEKDIQEQLDRRKPGQSKFTTPRKEDDEVHILSGVFEGKTTGTP ISLAVYNKTQRSADYSEIANYYRPGHADYTFDEKFGFRDYRGGGRSSGRETIGRVAAGAIAMKILKELGINITAYAKEIG GIGIDYDKFDIAERDNNAFNMPDKEAAEKVKAFAESKMSVGDSIGGVIECRVTGMMTGIGNPTFEKLDANLAKAIMSIGA VKGFEIGDGFEAAKVTGKYNNDEFVMKDGRVGKLTNHSGGVLGGISDGDEIVFRAAVKPTPSISALQETVNKQGEDIEVS IKGRHDPMIVPRAVVVVEAMTALTLVDLIFDNMTARMDRVKEFYRK
Sequences:
>Translated_366_residues MAGSVFGNIFKISTWGESHGEGLGVVIDGCPAGLPLCEKDIQEQLDRRKPGQSKFTTPRKEDDEVHILSGVFEGKTTGTP ISLAVYNKTQRSADYSEIANYYRPGHADYTFDEKFGFRDYRGGGRSSGRETIGRVAAGAIAMKILKELGINITAYAKEIG GIGIDYDKFDIAERDNNAFNMPDKEAAEKVKAFAESKMSVGDSIGGVIECRVTGMMTGIGNPTFEKLDANLAKAIMSIGA VKGFEIGDGFEAAKVTGKYNNDEFVMKDGRVGKLTNHSGGVLGGISDGDEIVFRAAVKPTPSISALQETVNKQGEDIEVS IKGRHDPMIVPRAVVVVEAMTALTLVDLIFDNMTARMDRVKEFYRK >Mature_365_residues AGSVFGNIFKISTWGESHGEGLGVVIDGCPAGLPLCEKDIQEQLDRRKPGQSKFTTPRKEDDEVHILSGVFEGKTTGTPI SLAVYNKTQRSADYSEIANYYRPGHADYTFDEKFGFRDYRGGGRSSGRETIGRVAAGAIAMKILKELGINITAYAKEIGG IGIDYDKFDIAERDNNAFNMPDKEAAEKVKAFAESKMSVGDSIGGVIECRVTGMMTGIGNPTFEKLDANLAKAIMSIGAV KGFEIGDGFEAAKVTGKYNNDEFVMKDGRVGKLTNHSGGVLGGISDGDEIVFRAAVKPTPSISALQETVNKQGEDIEVSI KGRHDPMIVPRAVVVVEAMTALTLVDLIFDNMTARMDRVKEFYRK
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; seventh step. [C]
COG id: COG0082
COG function: function code E; Chorismate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chorismate synthase family
Homologues:
Organism=Escherichia coli, GI1788669, Length=351, Percent_Identity=49.5726495726496, Blast_Score=322, Evalue=2e-89, Organism=Saccharomyces cerevisiae, GI6321290, Length=377, Percent_Identity=44.2970822281167, Blast_Score=309, Evalue=5e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROC_EUBE2 (C4Z562)
Other databases:
- EMBL: CP001104 - RefSeq: YP_002930213.1 - ProteinModelPortal: C4Z562 - GeneID: 7957306 - GenomeReviews: CP001104_GR - KEGG: eel:EUBELI_00758 - OMA: SRFTTQR - ProtClustDB: PRK05382 - HAMAP: MF_00300_B - InterPro: IPR000453 - InterPro: IPR020541 - PANTHER: PTHR21085 - PIRSF: PIRSF001456 - TIGRFAMs: TIGR00033
Pfam domain/function: PF01264 Chorismate_synt; SSF103263 Chorismate_synth
EC number: =4.2.3.5
Molecular weight: Translated: 39633; Mature: 39502
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: PS00787 CHORISMATE_SYNTHASE_1; PS00788 CHORISMATE_SYNTHASE_2; PS00789 CHORISMATE_SYNTHASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGSVFGNIFKISTWGESHGEGLGVVIDGCPAGLPLCEKDIQEQLDRRKPGQSKFTTPRK CCCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC EDDEVHILSGVFEGKTTGTPISLAVYNKTQRSADYSEIANYYRPGHADYTFDEKFGFRDY CCCCEEEEEEEECCCCCCCCEEEEEECCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC RGGGRSSGRETIGRVAAGAIAMKILKELGINITAYAKEIGGIGIDYDKFDIAERDNNAFN CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCC MPDKEAAEKVKAFAESKMSVGDSIGGVIECRVTGMMTGIGNPTFEKLDANLAKAIMSIGA CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC VKGFEIGDGFEAAKVTGKYNNDEFVMKDGRVGKLTNHSGGVLGGISDGDEIVFRAAVKPT CCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCCCEEECCCCCCEEEEEEECCCC PSISALQETVNKQGEDIEVSIKGRHDPMIVPRAVVVVEAMTALTLVDLIFDNMTARMDRV CCHHHHHHHHHCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEFYRK HHHHCC >Mature Secondary Structure AGSVFGNIFKISTWGESHGEGLGVVIDGCPAGLPLCEKDIQEQLDRRKPGQSKFTTPRK CCCCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC EDDEVHILSGVFEGKTTGTPISLAVYNKTQRSADYSEIANYYRPGHADYTFDEKFGFRDY CCCCEEEEEEEECCCCCCCCEEEEEECCHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC RGGGRSSGRETIGRVAAGAIAMKILKELGINITAYAKEIGGIGIDYDKFDIAERDNNAFN CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCCCCCCCCCCCCCCC MPDKEAAEKVKAFAESKMSVGDSIGGVIECRVTGMMTGIGNPTFEKLDANLAKAIMSIGA CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC VKGFEIGDGFEAAKVTGKYNNDEFVMKDGRVGKLTNHSGGVLGGISDGDEIVFRAAVKPT CCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCCCEEECCCCCCEEEEEEECCCC PSISALQETVNKQGEDIEVSIKGRHDPMIVPRAVVVVEAMTALTLVDLIFDNMTARMDRV CCHHHHHHHHHCCCCEEEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEFYRK HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA