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The map label for this gene is spoVD [H]

Identifier: 238916666

GI number: 238916666

Start: 731049

End: 732977

Strand: Direct

Name: spoVD [H]

Synonym: EUBELI_00728

Alternate gene names: 238916666

Gene position: 731049-732977 (Clockwise)

Preceding gene: 238916665

Following gene: 238916667

Centisome position: 34.09

GC content: 37.48

Gene sequence:

>1929_bases
ATGGACAATACCAGTGAAGCAAGAAGAAAGAAAATGATGCGCAGGAAACGCGCAATGCTTAAGAGGACACACAGAAGAAT
TAATGTTACATTTATAATAGTATTTGTATTATTACTTGCACTTGGTGTAAGGATATTTATGATTAACTATACACATGGGG
AGGAATATTCCCAGGCGGTGCTTAATCATCAGACATATACATCAACTACAATTCCTTATATGCGTGGTAATATTACTGCA
AGTGACGGAACAGTTCTGGCATATAGTGAGAAGGTGTATAATCTGATACTTGATGTAAAGAGTGTGACATCAGAGGACGG
AAAATATCTTAATAATACAATAGATGCATTGGTAAAATGTTTTGGTCTTGATAAAGATAATATAAAAAAAACAATCAATG
ATAATCCTTCAAGCCAGTATCAGAAGCTGCTTAAGGAGCTGACATCAGATGAAATAGCGGAATTTAACGAACTTAAGGCA
CAGAAGAACAGTAATATATACGGTGTCTGGTTTGAGGAAAGCTATGTGAGGAAATATCCGTTTAGTACTCTTGCATGTGA
TGTTATAGGCTTTGCTTCTAATGTAAATGGAGGAGAACTTGGTCTTGAAAGCCAGTATGACGATGAGCTTTCAGGAACAG
ACGGAGTTACATACAGCTATGTTGACGAAGACCTTAATGCAGTAGAAACGACAAAGGCAGCAGTTAACGGTAACAATATT
ATTACAACAATTGATTATAATGTGCAGTCCATAATAGAGAAATATATGGCTGCATATAATCAGGAAAAACCATCTAAGAA
TACAGCAATTGTTGTTATGAATCCTAAGAATGGTGAGATTCTAGGAATGGCAAGCTATCCACAGTTTGACCTTAATAATC
CCAGAAATCTTGCAAATGTATATTCTGAGGAGCAGCTTGCGTCAATGTCAGATACAGATGTAACCAATGCATTGTATCAG
TTATGGACTAATTATTGTGTATCAGAGTCATATGAGCCGGGTTCAACTTATAAGCCATTCACTATTGCTGCGGGTCTTGA
AGAAGGCGTTGTGCATGATGGAGATACTTATGAATGTAAGGGATATGAGTATGTTGGTCCTGATATGATTAAATGCCACT
CATATTCAACAACAGGAAGCCATGGTGTTCTTACATTGTCGCAGTCATTGGAAAATTCATGTAATCCTTATATGATTAAT
ATTGCAATAAAGCTTGGTAATGTCAGATTTGCACAGTATGAGAAAATGTTTGGATTTGGCGCAAAGACTGGTGTAGACCT
TCCTGGTGAAGCTACGGGTATTATGTATGATGAGAATAAGATAACAACGATAGATGCTGCAACCAATTCATTTGGACAGA
ATGTTAATGTTAATATGATACAGATGCTGTCAGCGTATAGTTCTCTTATTAATGATGGCAAGTATTATCAGCCACATATA
GTTAAGAGAATAGAATCAGCGAATGGAGAAGTTGTTAAAGAAAATTCACCTGTTCTTGTAAGACAGACTGTTACGGCTTC
AACATCAAAGTATCTTAGAAAATATCTGGAAAATACAGTAGAATTAGGAACAGCACATAAGGCGTATATAGAGGGGTATT
CTATTGCAGGAAAGACTGGTACTGCACAGAAGATTCCAAGAGCTGACCTTAAGTGGGTTATCTCATTTATAGGGCATGCT
CCGGCAGATGATCCTAAATTTGCAATATATATTGTTCTTGATGAACCTGATGGAACTACTGGTACATCGGGAAGTACATC
AGATGCACTTATACTTGCAAAAGATATTATGACGGAGCTGCTGCCTTATATGAATGTGTATAAGGATACAGATGAGCCAT
ATGTTGATCTGGGAAATGCACCGGAGGAATCAGGCGTTTCAGATGTTCCTGTTTCGGAACCGGCTGCAGCTACGACAGGC
AGCAACTAA

Upstream 100 bases:

>100_bases
TCGGTTACGATTCAAAGGAAAGTGAATATGTAAAGCAGTATAAGGATATCTCAAAATAACTAAAATGTGTGGCAGTGCGA
TATAAAGGATTGATAAATTT

Downstream 100 bases:

>100_bases
AATTATGTAATAATAAGTAGAATAACCCTGCTTTACTTCTCATAAAATGTAGAAGACTAAAGCGGGGTTATTTGTCAATG
AAGGATAATGACACATTTGG

Product: peptidoglycan glycosyltransferase

Products: NA

Alternate protein names: Sporulation-specific penicillin-binding protein [H]

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MDNTSEARRKKMMRRKRAMLKRTHRRINVTFIIVFVLLLALGVRIFMINYTHGEEYSQAVLNHQTYTSTTIPYMRGNITA
SDGTVLAYSEKVYNLILDVKSVTSEDGKYLNNTIDALVKCFGLDKDNIKKTINDNPSSQYQKLLKELTSDEIAEFNELKA
QKNSNIYGVWFEESYVRKYPFSTLACDVIGFASNVNGGELGLESQYDDELSGTDGVTYSYVDEDLNAVETTKAAVNGNNI
ITTIDYNVQSIIEKYMAAYNQEKPSKNTAIVVMNPKNGEILGMASYPQFDLNNPRNLANVYSEEQLASMSDTDVTNALYQ
LWTNYCVSESYEPGSTYKPFTIAAGLEEGVVHDGDTYECKGYEYVGPDMIKCHSYSTTGSHGVLTLSQSLENSCNPYMIN
IAIKLGNVRFAQYEKMFGFGAKTGVDLPGEATGIMYDENKITTIDAATNSFGQNVNVNMIQMLSAYSSLINDGKYYQPHI
VKRIESANGEVVKENSPVLVRQTVTASTSKYLRKYLENTVELGTAHKAYIEGYSIAGKTGTAQKIPRADLKWVISFIGHA
PADDPKFAIYIVLDEPDGTTGTSGSTSDALILAKDIMTELLPYMNVYKDTDEPYVDLGNAPEESGVSDVPVSEPAAATTG
SN

Sequences:

>Translated_642_residues
MDNTSEARRKKMMRRKRAMLKRTHRRINVTFIIVFVLLLALGVRIFMINYTHGEEYSQAVLNHQTYTSTTIPYMRGNITA
SDGTVLAYSEKVYNLILDVKSVTSEDGKYLNNTIDALVKCFGLDKDNIKKTINDNPSSQYQKLLKELTSDEIAEFNELKA
QKNSNIYGVWFEESYVRKYPFSTLACDVIGFASNVNGGELGLESQYDDELSGTDGVTYSYVDEDLNAVETTKAAVNGNNI
ITTIDYNVQSIIEKYMAAYNQEKPSKNTAIVVMNPKNGEILGMASYPQFDLNNPRNLANVYSEEQLASMSDTDVTNALYQ
LWTNYCVSESYEPGSTYKPFTIAAGLEEGVVHDGDTYECKGYEYVGPDMIKCHSYSTTGSHGVLTLSQSLENSCNPYMIN
IAIKLGNVRFAQYEKMFGFGAKTGVDLPGEATGIMYDENKITTIDAATNSFGQNVNVNMIQMLSAYSSLINDGKYYQPHI
VKRIESANGEVVKENSPVLVRQTVTASTSKYLRKYLENTVELGTAHKAYIEGYSIAGKTGTAQKIPRADLKWVISFIGHA
PADDPKFAIYIVLDEPDGTTGTSGSTSDALILAKDIMTELLPYMNVYKDTDEPYVDLGNAPEESGVSDVPVSEPAAATTG
SN
>Mature_642_residues
MDNTSEARRKKMMRRKRAMLKRTHRRINVTFIIVFVLLLALGVRIFMINYTHGEEYSQAVLNHQTYTSTTIPYMRGNITA
SDGTVLAYSEKVYNLILDVKSVTSEDGKYLNNTIDALVKCFGLDKDNIKKTINDNPSSQYQKLLKELTSDEIAEFNELKA
QKNSNIYGVWFEESYVRKYPFSTLACDVIGFASNVNGGELGLESQYDDELSGTDGVTYSYVDEDLNAVETTKAAVNGNNI
ITTIDYNVQSIIEKYMAAYNQEKPSKNTAIVVMNPKNGEILGMASYPQFDLNNPRNLANVYSEEQLASMSDTDVTNALYQ
LWTNYCVSESYEPGSTYKPFTIAAGLEEGVVHDGDTYECKGYEYVGPDMIKCHSYSTTGSHGVLTLSQSLENSCNPYMIN
IAIKLGNVRFAQYEKMFGFGAKTGVDLPGEATGIMYDENKITTIDAATNSFGQNVNVNMIQMLSAYSSLINDGKYYQPHI
VKRIESANGEVVKENSPVLVRQTVTASTSKYLRKYLENTVELGTAHKAYIEGYSIAGKTGTAQKIPRADLKWVISFIGHA
PADDPKFAIYIVLDEPDGTTGTSGSTSDALILAKDIMTELLPYMNVYKDTDEPYVDLGNAPEESGVSDVPVSEPAAATTG
SN

Specific function: Penicillin-binding protein with an unknown catalytic activity. May have a specialized role in the morphogenesis of spore cortex, which is a modified form of peptidoglycan. Pore cortex formation is determined primarily by the mother cell [H]

COG id: COG0768

COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PASTA domain [H]

Homologues:

Organism=Escherichia coli, GI1786272, Length=550, Percent_Identity=27.0909090909091, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1786854, Length=608, Percent_Identity=24.5065789473684, Blast_Score=119, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR005543
- InterPro:   IPR005311
- InterPro:   IPR001460
- InterPro:   IPR011927 [H]

Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]

EC number: NA

Molecular weight: Translated: 71053; Mature: 71053

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNTSEARRKKMMRRKRAMLKRTHRRINVTFIIVFVLLLALGVRIFMINYTHGEEYSQAV
CCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH
LNHQTYTSTTIPYMRGNITASDGTVLAYSEKVYNLILDVKSVTSEDGKYLNNTIDALVKC
HCCCCCCCCCCCEEECEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FGLDKDNIKKTINDNPSSQYQKLLKELTSDEIAEFNELKAQKNSNIYGVWFEESYVRKYP
HCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCC
FSTLACDVIGFASNVNGGELGLESQYDDELSGTDGVTYSYVDEDLNAVETTKAAVNGNNI
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCHHHHHHHHEECCCEE
ITTIDYNVQSIIEKYMAAYNQEKPSKNTAIVVMNPKNGEILGMASYPQFDLNNPRNLANV
EEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHH
YSEEQLASMSDTDVTNALYQLWTNYCVSESYEPGSTYKPFTIAAGLEEGVVHDGDTYECK
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEC
GYEYVGPDMIKCHSYSTTGSHGVLTLSQSLENSCNPYMINIAIKLGNVRFAQYEKMFGFG
CEEECCCCEEEEECCCCCCCCCEEEEEHHHHCCCCCEEEEEEEEECCEEHHHHHHHHCCC
AKTGVDLPGEATGIMYDENKITTIDAATNSFGQNVNVNMIQMLSAYSSLINDGKYYQPHI
CCCCCCCCCCCCEEEECCCEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
VKRIESANGEVVKENSPVLVRQTVTASTSKYLRKYLENTVELGTAHKAYIEGYSIAGKTG
HHHHHCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCC
TAQKIPRADLKWVISFIGHAPADDPKFAIYIVLDEPDGTTGTSGSTSDALILAKDIMTEL
CCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHH
LPYMNVYKDTDEPYVDLGNAPEESGVSDVPVSEPAAATTGSN
HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDNTSEARRKKMMRRKRAMLKRTHRRINVTFIIVFVLLLALGVRIFMINYTHGEEYSQAV
CCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHH
LNHQTYTSTTIPYMRGNITASDGTVLAYSEKVYNLILDVKSVTSEDGKYLNNTIDALVKC
HCCCCCCCCCCCEEECEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
FGLDKDNIKKTINDNPSSQYQKLLKELTSDEIAEFNELKAQKNSNIYGVWFEESYVRKYP
HCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCC
FSTLACDVIGFASNVNGGELGLESQYDDELSGTDGVTYSYVDEDLNAVETTKAAVNGNNI
CHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCCCHHHHHHHHEECCCEE
ITTIDYNVQSIIEKYMAAYNQEKPSKNTAIVVMNPKNGEILGMASYPQFDLNNPRNLANV
EEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCHHHHHH
YSEEQLASMSDTDVTNALYQLWTNYCVSESYEPGSTYKPFTIAAGLEEGVVHDGDTYECK
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEC
GYEYVGPDMIKCHSYSTTGSHGVLTLSQSLENSCNPYMINIAIKLGNVRFAQYEKMFGFG
CEEECCCCEEEEECCCCCCCCCEEEEEHHHHCCCCCEEEEEEEEECCEEHHHHHHHHCCC
AKTGVDLPGEATGIMYDENKITTIDAATNSFGQNVNVNMIQMLSAYSSLINDGKYYQPHI
CCCCCCCCCCCCEEEECCCEEEEEECCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHH
VKRIESANGEVVKENSPVLVRQTVTASTSKYLRKYLENTVELGTAHKAYIEGYSIAGKTG
HHHHHCCCCCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEECCCCC
TAQKIPRADLKWVISFIGHAPADDPKFAIYIVLDEPDGTTGTSGSTSDALILAKDIMTEL
CCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEHHHHHHHH
LPYMNVYKDTDEPYVDLGNAPEESGVSDVPVSEPAAATTGSN
HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8289242; 9384377; 8244929; 8436954 [H]