| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is yybJ [H]
Identifier: 238916598
GI number: 238916598
Start: 655867
End: 656505
Strand: Direct
Name: yybJ [H]
Synonym: EUBELI_00655
Alternate gene names: 238916598
Gene position: 655867-656505 (Clockwise)
Preceding gene: 238916597
Following gene: 238916599
Centisome position: 30.59
GC content: 37.4
Gene sequence:
>639_bases ATGAGAGTTGTTTTAAAAAATGTATGCAAAGACATAAAAGGTGCAAGAGTACTTGATAATGTTAATCTTGAACTTGAAAG CGGCAGAGTGTATGGATTTAAAGGTAAGAATGGCTCAGGTAAAACCATGCTTATGCGGGCTATAAGTGGGCTTATAAAGG TGAAAGGTGAAATTGAGATTGATGGGGAAATACTTGGAAAAGACTTTTCATTTCCACCAAGTATAGGGATTCTTATAGAA AATCCATCGTTTGTTCAGGAATATACAGGGTTAAAGAATCTAGAAATGCTGGCATGCATTAAAAATAATACAGGAATTGA GGATATAAGGCATGTCATGGAACAGGTAGGACTTGATCCTGACGATAAAAGAACATACAGGAAATATTCACTGGGAATGA AACAGAAACTAGGAATTGCTGCAGCCTATATGGAGAATCCGGATATTATTATACTTGATGAGCCAATAAATGCGCTTGAT GAAGCAGGAGCAAAGCAGGTTCATGAGATACTTGAGGAGCAGAAAAAGAGAGGAGCACTTATAATAATTGCCTGTCATGA TAAGGAAGAACTTGAAATGCTGTCTGATGAGATAATTGAGATTTACGAGGGCAGGATTGTTGCCCAAGAGAAAGTGTGA
Upstream 100 bases:
>100_bases TATGATGCTGGCTGATGCTGTAATAATATTGCTATGTGCAATACTGGGATATGTATATATAAGAAGGATAGATATACTGA ATGCTAAGGAGGTATAGTGC
Downstream 100 bases:
>100_bases ATGAAATAATAATGGATAATAGAATATATAATTATATTGTGCATAATTCTGATATAAATAATAAAGATGAAAATAAAGTT ATTGAATTTGGAATAGAAAT
Product: antibiotic transport system ATP-binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEIDGEILGKDFSFPPSIGILIE NPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDPDDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALD EAGAKQVHEILEEQKKRGALIIIACHDKEELEMLSDEIIEIYEGRIVAQEKV
Sequences:
>Translated_212_residues MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEIDGEILGKDFSFPPSIGILIE NPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDPDDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALD EAGAKQVHEILEEQKKRGALIIIACHDKEELEMLSDEIIEIYEGRIVAQEKV >Mature_212_residues MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEIDGEILGKDFSFPPSIGILIE NPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDPDDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALD EAGAKQVHEILEEQKKRGALIIIACHDKEELEMLSDEIIEIYEGRIVAQEKV
Specific function: Part Of A Binding-Protein-Dependent Transport System For Taurine. Probably Responsible For Energy Coupling To The Transport System. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI11967969, Length=214, Percent_Identity=26.6355140186916, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI150417984, Length=213, Percent_Identity=26.7605633802817, Blast_Score=75, Evalue=4e-14, Organism=Homo sapiens, GI27881501, Length=210, Percent_Identity=27.1428571428571, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI30795238, Length=210, Percent_Identity=27.1428571428571, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI105990541, Length=211, Percent_Identity=24.6445497630332, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI116734710, Length=198, Percent_Identity=26.7676767676768, Blast_Score=73, Evalue=1e-13, Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=26.4150943396226, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI21536376, Length=219, Percent_Identity=28.310502283105, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI153792144, Length=213, Percent_Identity=27.2300469483568, Blast_Score=69, Evalue=2e-12, Organism=Homo sapiens, GI27477115, Length=194, Percent_Identity=25.7731958762887, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI45446740, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI47078218, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=2e-11, Organism=Homo sapiens, GI6005701, Length=194, Percent_Identity=26.2886597938144, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI1786563, Length=206, Percent_Identity=28.6407766990291, Blast_Score=85, Evalue=3e-18, Organism=Escherichia coli, GI1788225, Length=221, Percent_Identity=29.4117647058824, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=25.5813953488372, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=28.6384976525822, Blast_Score=79, Evalue=2e-16, Organism=Escherichia coli, GI1786398, Length=222, Percent_Identity=27.4774774774775, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI87081782, Length=194, Percent_Identity=27.8350515463918, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788506, Length=212, Percent_Identity=27.8301886792453, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788472, Length=224, Percent_Identity=25, Blast_Score=78, Evalue=5e-16, Organism=Escherichia coli, GI1788210, Length=214, Percent_Identity=25.2336448598131, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1787105, Length=212, Percent_Identity=27.3584905660377, Blast_Score=75, Evalue=3e-15, Organism=Escherichia coli, GI87081709, Length=220, Percent_Identity=26.8181818181818, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1787712, Length=214, Percent_Identity=27.5700934579439, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87081834, Length=218, Percent_Identity=25.6880733944954, Blast_Score=74, Evalue=6e-15, Organism=Escherichia coli, GI1789991, Length=214, Percent_Identity=28.5046728971963, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI48995001, Length=210, Percent_Identity=23.3333333333333, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=27.9620853080569, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI1787500, Length=215, Percent_Identity=30.2325581395349, Blast_Score=73, Evalue=1e-14, Organism=Escherichia coli, GI48994943, Length=197, Percent_Identity=26.3959390862944, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1787547, Length=203, Percent_Identity=30.0492610837438, Blast_Score=72, Evalue=2e-14, Organism=Escherichia coli, GI1786319, Length=211, Percent_Identity=29.3838862559242, Blast_Score=71, Evalue=4e-14, Organism=Escherichia coli, GI87081791, Length=208, Percent_Identity=24.0384615384615, Blast_Score=71, Evalue=6e-14, Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=26.2672811059908, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI1789962, Length=206, Percent_Identity=29.126213592233, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789032, Length=209, Percent_Identity=26.7942583732057, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1789873, Length=213, Percent_Identity=25.3521126760563, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI48994883, Length=227, Percent_Identity=25.5506607929515, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1790525, Length=221, Percent_Identity=26.2443438914027, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1788450, Length=217, Percent_Identity=25.3456221198157, Blast_Score=68, Evalue=4e-13, Organism=Escherichia coli, GI1786345, Length=221, Percent_Identity=25.3393665158371, Blast_Score=67, Evalue=6e-13, Organism=Escherichia coli, GI1789593, Length=212, Percent_Identity=24.5283018867925, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1790162, Length=220, Percent_Identity=25.4545454545455, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786872, Length=215, Percent_Identity=26.9767441860465, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1790190, Length=228, Percent_Identity=25.8771929824561, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1789672, Length=216, Percent_Identity=25.9259259259259, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI145693107, Length=223, Percent_Identity=25.5605381165919, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1789963, Length=213, Percent_Identity=25.8215962441315, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787758, Length=210, Percent_Identity=24.7619047619048, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787759, Length=214, Percent_Identity=25.2336448598131, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1787089, Length=209, Percent_Identity=23.9234449760766, Blast_Score=64, Evalue=6e-12, Organism=Escherichia coli, GI1787792, Length=211, Percent_Identity=23.696682464455, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1790544, Length=225, Percent_Identity=23.5555555555556, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1786803, Length=204, Percent_Identity=26.9607843137255, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1788165, Length=199, Percent_Identity=25.1256281407035, Blast_Score=63, Evalue=1e-11, Organism=Escherichia coli, GI1788897, Length=210, Percent_Identity=25.7142857142857, Blast_Score=63, Evalue=2e-11, Organism=Escherichia coli, GI1786975, Length=194, Percent_Identity=26.8041237113402, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI1786703, Length=201, Percent_Identity=22.8855721393035, Blast_Score=61, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17510237, Length=209, Percent_Identity=24.4019138755981, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71983523, Length=217, Percent_Identity=26.2672811059908, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71983516, Length=217, Percent_Identity=26.2672811059908, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI71983510, Length=217, Percent_Identity=26.2672811059908, Blast_Score=74, Evalue=5e-14, Organism=Caenorhabditis elegans, GI115533608, Length=193, Percent_Identity=27.979274611399, Blast_Score=72, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17565586, Length=211, Percent_Identity=23.696682464455, Blast_Score=68, Evalue=4e-12, Organism=Caenorhabditis elegans, GI133930907, Length=209, Percent_Identity=25.3588516746411, Blast_Score=67, Evalue=6e-12, Organism=Caenorhabditis elegans, GI17565938, Length=186, Percent_Identity=26.3440860215054, Blast_Score=64, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6325030, Length=208, Percent_Identity=32.2115384615385, Blast_Score=72, Evalue=6e-14, Organism=Saccharomyces cerevisiae, GI6324904, Length=221, Percent_Identity=26.6968325791855, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI221500365, Length=214, Percent_Identity=27.5700934579439, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI116007184, Length=214, Percent_Identity=27.5700934579439, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI28574150, Length=214, Percent_Identity=27.5700934579439, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007328, Length=214, Percent_Identity=27.5700934579439, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI221512771, Length=216, Percent_Identity=25.9259259259259, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24666836, Length=216, Percent_Identity=26.8518518518519, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=21.5311004784689, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI24582014, Length=181, Percent_Identity=28.1767955801105, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582012, Length=181, Percent_Identity=28.1767955801105, Blast_Score=65, Evalue=2e-11, Organism=Drosophila melanogaster, GI24662800, Length=211, Percent_Identity=27.0142180094787, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24643674, Length=209, Percent_Identity=26.3157894736842, Blast_Score=65, Evalue=4e-11, Organism=Drosophila melanogaster, GI28573573, Length=204, Percent_Identity=27.9411764705882, Blast_Score=64, Evalue=7e-11, Organism=Drosophila melanogaster, GI28573571, Length=204, Percent_Identity=27.9411764705882, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 23703; Mature: 23703
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEI CCCHHHHHHHHCCCCEEEECCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHEECCEEEE DGEILGKDFSFPPSIGILIENPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDP CCEEECCCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC DDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALDEAGAKQVHEILEEQKKRGAL CCHHHHHHHHCCHHHHHCEEEEEECCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCE IIIACHDKEELEMLSDEIIEIYEGRIVAQEKV EEEEECCHHHHHHHHHHHHHHHCCEEEEECCC >Mature Secondary Structure MRVVLKNVCKDIKGARVLDNVNLELESGRVYGFKGKNGSGKTMLMRAISGLIKVKGEIEI CCCHHHHHHHHCCCCEEEECCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHEECCEEEE DGEILGKDFSFPPSIGILIENPSFVQEYTGLKNLEMLACIKNNTGIEDIRHVMEQVGLDP CCEEECCCCCCCCCEEEEECCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCC DDKRTYRKYSLGMKQKLGIAAAYMENPDIIILDEPINALDEAGAKQVHEILEEQKKRGAL CCHHHHHHHHCCHHHHHCEEEEEECCCCEEEECCCHHHHHHCCHHHHHHHHHHHHHCCCE IIIACHDKEELEMLSDEIIEIYEGRIVAQEKV EEEEECCHHHHHHHHHHHHHHHCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1938973; 7584024; 9384377 [H]