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The map label for this gene is ykoT [H]

Identifier: 238916569

GI number: 238916569

Start: 634387

End: 635367

Strand: Reverse

Name: ykoT [H]

Synonym: EUBELI_00626

Alternate gene names: 238916569

Gene position: 635367-634387 (Counterclockwise)

Preceding gene: 238916570

Following gene: 238916545

Centisome position: 29.63

GC content: 40.16

Gene sequence:

>981_bases
ATGAGTGAAAATAAAAAAAATTGTTTATATATTGTAATTCCATGCTACAACGAAGAACAGGTTCTGCCTGTTACCTCAGG
CATGTTTCTTGATGAACTTAACCATCTTATCAAAGCCGGCAAAATCAGTTCTGGCAGCAGGATAATGTTTGTCAATGATG
GAAGTTCTGACAGTACATGGGATATAATTACGGATTTATCAAAGAAAGATGAACATTTCATAGGAATAAGCCAGAGTCGT
AACCGCGGACACCAGAGCAGTGTGCTTGCCGGTCTTATGGAGGCTTCCCAGTATGCTGATATTACTATATCTATAGATTG
CGACGGACAGGATGATATTCATGCAATGGAAGATATGGTTGACGCTTACCACGATGGCTGTGATATCGTCTATGGTGTAA
GAAATGACCGTTCAACAGATACATTTTTTAAAAGAAACACAGCCAAAGGCTTCTATAAAATCATGGCAAAGCTTGGCGCA
GAAACTGTATATAACCATGCCGATTACAGGCTTTTATCAAAGCGTGTGATTAATGAACTGGCACAATTCAAAGAAACTAA
TCTGTACCTTCGTGGTCTTATCCCGCTTGTCGGTTTTAAGAGTACAAGCGTATATTATTCAAGAAGCGAACGACTTGCCG
GAAAGTCACACTACCCTTTCAGCAAAATGCTTAACCTTGCATTAAACGGCATAACAAGCCTTAGTGTAAAACCACTCCGT
CTTGTTATGTCACTTGGTATTATAGTTTCAATCATCAGCTTTATCGGTGTTATATGGGCTGTCGTTGACAACCTGCTCGG
CAACACAGTAACCGGCTGGGCAAGTACAGTATGTATCGTATGCTTCATGGGCGGAATACAACTTATGTGCCTCGGGGTTA
TCGGGGAATACATCGGGAAGATATATATAGAGGTCAAGAATAGACCTAGGTTTATTATCAGTGAGAGGACTTATGAGTGC
AATGAAGATAAAAATCAGTAA

Upstream 100 bases:

>100_bases
CATGACAATAAAAGTTATAAAGAATATAAGGATTATACTATAAAAGTTGAATCTGGTGAAATAACTGAAACTGATAACTG
ATTATACATCTGGGGGTTAT

Downstream 100 bases:

>100_bases
TAAAAACGCGGCATATAATCCAAGACTGATGTAGATTCATTATACATGCCTGATGAGTGATACCATAGACTTATTTCCCA
TAAAACATTCATATATGTGT

Product: ribonuclease III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 325

Protein sequence:

>326_residues
MSENKKNCLYIVIPCYNEEQVLPVTSGMFLDELNHLIKAGKISSGSRIMFVNDGSSDSTWDIITDLSKKDEHFIGISQSR
NRGHQSSVLAGLMEASQYADITISIDCDGQDDIHAMEDMVDAYHDGCDIVYGVRNDRSTDTFFKRNTAKGFYKIMAKLGA
ETVYNHADYRLLSKRVINELAQFKETNLYLRGLIPLVGFKSTSVYYSRSERLAGKSHYPFSKMLNLALNGITSLSVKPLR
LVMSLGIIVSIISFIGVIWAVVDNLLGNTVTGWASTVCIVCFMGGIQLMCLGVIGEYIGKIYIEVKNRPRFIISERTYEC
NEDKNQ

Sequences:

>Translated_326_residues
MSENKKNCLYIVIPCYNEEQVLPVTSGMFLDELNHLIKAGKISSGSRIMFVNDGSSDSTWDIITDLSKKDEHFIGISQSR
NRGHQSSVLAGLMEASQYADITISIDCDGQDDIHAMEDMVDAYHDGCDIVYGVRNDRSTDTFFKRNTAKGFYKIMAKLGA
ETVYNHADYRLLSKRVINELAQFKETNLYLRGLIPLVGFKSTSVYYSRSERLAGKSHYPFSKMLNLALNGITSLSVKPLR
LVMSLGIIVSIISFIGVIWAVVDNLLGNTVTGWASTVCIVCFMGGIQLMCLGVIGEYIGKIYIEVKNRPRFIISERTYEC
NEDKNQ
>Mature_325_residues
SENKKNCLYIVIPCYNEEQVLPVTSGMFLDELNHLIKAGKISSGSRIMFVNDGSSDSTWDIITDLSKKDEHFIGISQSRN
RGHQSSVLAGLMEASQYADITISIDCDGQDDIHAMEDMVDAYHDGCDIVYGVRNDRSTDTFFKRNTAKGFYKIMAKLGAE
TVYNHADYRLLSKRVINELAQFKETNLYLRGLIPLVGFKSTSVYYSRSERLAGKSHYPFSKMLNLALNGITSLSVKPLRL
VMSLGIIVSIISFIGVIWAVVDNLLGNTVTGWASTVCIVCFMGGIQLMCLGVIGEYIGKIYIEVKNRPRFIISERTYECN
EDKNQ

Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788692, Length=307, Percent_Identity=38.4364820846906, Blast_Score=221, Evalue=5e-59,
Organism=Escherichia coli, GI1788588, Length=318, Percent_Identity=26.7295597484277, Blast_Score=128, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 36517; Mature: 36386

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENKKNCLYIVIPCYNEEQVLPVTSGMFLDELNHLIKAGKISSGSRIMFVNDGSSDSTW
CCCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCH
DIITDLSKKDEHFIGISQSRNRGHQSSVLAGLMEASQYADITISIDCDGQDDIHAMEDMV
HHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
DAYHDGCDIVYGVRNDRSTDTFFKRNTAKGFYKIMAKLGAETVYNHADYRLLSKRVINEL
HHHCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQFKETNLYLRGLIPLVGFKSTSVYYSRSERLAGKSHYPFSKMLNLALNGITSLSVKPLR
HHHHHCCCCEEEHHHHHCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
LVMSLGIIVSIISFIGVIWAVVDNLLGNTVTGWASTVCIVCFMGGIQLMCLGVIGEYIGK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
IYIEVKNRPRFIISERTYECNEDKNQ
EEEEECCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
SENKKNCLYIVIPCYNEEQVLPVTSGMFLDELNHLIKAGKISSGSRIMFVNDGSSDSTW
CCCCCCEEEEEEECCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCH
DIITDLSKKDEHFIGISQSRNRGHQSSVLAGLMEASQYADITISIDCDGQDDIHAMEDMV
HHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHH
DAYHDGCDIVYGVRNDRSTDTFFKRNTAKGFYKIMAKLGAETVYNHADYRLLSKRVINEL
HHHCCCCEEEEECCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQFKETNLYLRGLIPLVGFKSTSVYYSRSERLAGKSHYPFSKMLNLALNGITSLSVKPLR
HHHHHCCCCEEEHHHHHCCCCCEEEEEHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHH
LVMSLGIIVSIISFIGVIWAVVDNLLGNTVTGWASTVCIVCFMGGIQLMCLGVIGEYIGK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCE
IYIEVKNRPRFIISERTYECNEDKNQ
EEEEECCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]