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The map label for this gene is xylB [H]

Identifier: 238916561

GI number: 238916561

Start: 627217

End: 628695

Strand: Direct

Name: xylB [H]

Synonym: EUBELI_00618

Alternate gene names: 238916561

Gene position: 627217-628695 (Clockwise)

Preceding gene: 238916560

Following gene: 238916562

Centisome position: 29.25

GC content: 42.87

Gene sequence:

>1479_bases
ATGAATTATATAGGAATTGATCTTGGAACTTCATCGGTTAAGCTTGTTCTTATGGACACAGCAGGACATATTATTGCAAA
TGTGTCTAAGAGTTATCCGATTGATTACCCTAAGGCCGGCTGGTCAGAGCAGAATCCTTATGACTGGTATGATGCATGTA
TGGAAGGCATGAAGGAGCTGCTTGACGGACAGGATGAATCAACAGTTAGCGGTATCAGCTTTGGTGGACAGATGCATGGA
CTTGTTATTCTTGATAAGAATGATGAGGTTATTAGACCGGCTATTTTATGGAATGACGGAAGAACAACGAAGCAGTGTGA
GTACCTGAATGAAGTGATAGGCAGGGATAAGTTATCAGAATATACAGCAAATATTGCATTTGCAGGTTTCACAGCACCTA
AGATATTGTGGGTGAAGGAGAATGAACCGGATAATTTTGCTAAGATAGACAAGATAATGCTTCCAAAGGATTATATTGCG
TATCGTCTTACAGGTGTGCATTGTACAGATGTTTCAGATGCTTCGGGTATGCTGCTGTTTGATGTGAAGAACAGGCGTTG
GTCGCGCCAGATGCTTGATATATGTGGCGTGACAGAGGCACAGATGCCACGCATCTTTGAAAGCAGTGAGTGTGTTGGTA
CGGTAAAGAAGGATATTGCAGATGAGCTTGGAATAGGAAGTGAAGTAATTGTTGCAGCCGGTGCAGGTGATAATGCAGCT
GCTGCAGTAGGCACTGGTACTGTCGGTGACGGACATTGTAATGTTTCTTTGGGAACAAGCGGTACAATATTCATTTCAAG
CAAGGAATTCGGAGTGGATTCCAATAATGCACTTCATTCTTTCGCACATGCGGATGGGAAATATCATCTTATGGGCTGTA
TATTAAGTGCAGCTTCAGCTAATGGATGGTGGATGGACAAGATACTCGGAACTAATGATTATGCAGGTGAACAGTCGCAG
ATAACAGATGATGACCTTGGCAATAATAATGTGTATTTCCTTCCATATCTGATGGGTGAGAGATCACCGCATAATGACGA
ATTTGCAAGAGGCACATTTACAGGAATGACAATGGATACTGAGCGTAAGGATATGACACAGGCAGTTCTGGAAGGCGTTG
CATTTGCAATAAGGGACTGCTTCGAGGTTGCTAAGAGTCTTGGTATAAGAGTGGAGTCAACCCGTATGTGCGGTGGTGGC
GCTAAGTCAGAACTGTGGTGTAAGATTATGGCTAATGTACTTGGAATTCCTGTGGAACTGTTAGAGTCAGAGGAAGGTCC
TGCTATGGGTGCGGCAATGCTTGCCATGGTTGCAGCCGGGGAGTATAATTGCGTTGAAGATGCGTCTAATGCTCTCGTTA
AAGTACGAAAGACAATAAGACCAGACGAGAAGATAATAGAAAGATACGAGGATAAGTACAATAAGTTCAGATGTATCTAT
CCTGCAATGAAGAACGTATTCAGAACAATTAATGAGTGA

Upstream 100 bases:

>100_bases
GTGTCATTCAATCAGCCTAAGGGCATGCTTTATAAGAGCGAGAATCCATTTGCATAAACAGGTGCGGTTATAGATATATG
ATTGCGGAAAGGAGTCTGGT

Downstream 100 bases:

>100_bases
TTAACAAGGAGAATTTTATTATGAAGTTTTTTATTGATACTGCAAATGTTGAGGATATCCGTAAGGCTAATGACATGGGA
GTTATCTGTGGAGTAACCAC

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MNYIGIDLGTSSVKLVLMDTAGHIIANVSKSYPIDYPKAGWSEQNPYDWYDACMEGMKELLDGQDESTVSGISFGGQMHG
LVILDKNDEVIRPAILWNDGRTTKQCEYLNEVIGRDKLSEYTANIAFAGFTAPKILWVKENEPDNFAKIDKIMLPKDYIA
YRLTGVHCTDVSDASGMLLFDVKNRRWSRQMLDICGVTEAQMPRIFESSECVGTVKKDIADELGIGSEVIVAAGAGDNAA
AAVGTGTVGDGHCNVSLGTSGTIFISSKEFGVDSNNALHSFAHADGKYHLMGCILSAASANGWWMDKILGTNDYAGEQSQ
ITDDDLGNNNVYFLPYLMGERSPHNDEFARGTFTGMTMDTERKDMTQAVLEGVAFAIRDCFEVAKSLGIRVESTRMCGGG
AKSELWCKIMANVLGIPVELLESEEGPAMGAAMLAMVAAGEYNCVEDASNALVKVRKTIRPDEKIIERYEDKYNKFRCIY
PAMKNVFRTINE

Sequences:

>Translated_492_residues
MNYIGIDLGTSSVKLVLMDTAGHIIANVSKSYPIDYPKAGWSEQNPYDWYDACMEGMKELLDGQDESTVSGISFGGQMHG
LVILDKNDEVIRPAILWNDGRTTKQCEYLNEVIGRDKLSEYTANIAFAGFTAPKILWVKENEPDNFAKIDKIMLPKDYIA
YRLTGVHCTDVSDASGMLLFDVKNRRWSRQMLDICGVTEAQMPRIFESSECVGTVKKDIADELGIGSEVIVAAGAGDNAA
AAVGTGTVGDGHCNVSLGTSGTIFISSKEFGVDSNNALHSFAHADGKYHLMGCILSAASANGWWMDKILGTNDYAGEQSQ
ITDDDLGNNNVYFLPYLMGERSPHNDEFARGTFTGMTMDTERKDMTQAVLEGVAFAIRDCFEVAKSLGIRVESTRMCGGG
AKSELWCKIMANVLGIPVELLESEEGPAMGAAMLAMVAAGEYNCVEDASNALVKVRKTIRPDEKIIERYEDKYNKFRCIY
PAMKNVFRTINE
>Mature_492_residues
MNYIGIDLGTSSVKLVLMDTAGHIIANVSKSYPIDYPKAGWSEQNPYDWYDACMEGMKELLDGQDESTVSGISFGGQMHG
LVILDKNDEVIRPAILWNDGRTTKQCEYLNEVIGRDKLSEYTANIAFAGFTAPKILWVKENEPDNFAKIDKIMLPKDYIA
YRLTGVHCTDVSDASGMLLFDVKNRRWSRQMLDICGVTEAQMPRIFESSECVGTVKKDIADELGIGSEVIVAAGAGDNAA
AAVGTGTVGDGHCNVSLGTSGTIFISSKEFGVDSNNALHSFAHADGKYHLMGCILSAASANGWWMDKILGTNDYAGEQSQ
ITDDDLGNNNVYFLPYLMGERSPHNDEFARGTFTGMTMDTERKDMTQAVLEGVAFAIRDCFEVAKSLGIRVESTRMCGGG
AKSELWCKIMANVLGIPVELLESEEGPAMGAAMLAMVAAGEYNCVEDASNALVKVRKTIRPDEKIIERYEDKYNKFRCIY
PAMKNVFRTINE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI42794763, Length=444, Percent_Identity=26.1261261261261, Blast_Score=135, Evalue=1e-31,
Organism=Homo sapiens, GI189409120, Length=444, Percent_Identity=26.1261261261261, Blast_Score=131, Evalue=2e-30,
Organism=Homo sapiens, GI4504007, Length=444, Percent_Identity=26.1261261261261, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI41393575, Length=441, Percent_Identity=25.1700680272109, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI88196792, Length=515, Percent_Identity=22.5242718446602, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI18860918, Length=488, Percent_Identity=25.6147540983607, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI164663828, Length=166, Percent_Identity=26.5060240963855, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI164663830, Length=174, Percent_Identity=28.1609195402299, Blast_Score=73, Evalue=6e-13,
Organism=Escherichia coli, GI1789987, Length=481, Percent_Identity=39.7089397089397, Blast_Score=342, Evalue=3e-95,
Organism=Escherichia coli, GI1790361, Length=483, Percent_Identity=26.5010351966874, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1790005, Length=498, Percent_Identity=26.1044176706827, Blast_Score=166, Evalue=4e-42,
Organism=Escherichia coli, GI1789168, Length=462, Percent_Identity=24.4588744588745, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI1787789, Length=516, Percent_Identity=23.8372093023256, Blast_Score=115, Evalue=7e-27,
Organism=Escherichia coli, GI1789138, Length=494, Percent_Identity=21.8623481781377, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1786249, Length=547, Percent_Identity=21.5722120658135, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17535599, Length=446, Percent_Identity=26.457399103139, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17554530, Length=488, Percent_Identity=21.7213114754098, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71986140, Length=500, Percent_Identity=22.8, Blast_Score=89, Evalue=8e-18,
Organism=Caenorhabditis elegans, GI71986147, Length=260, Percent_Identity=27.6923076923077, Blast_Score=83, Evalue=4e-16,
Organism=Saccharomyces cerevisiae, GI6320314, Length=559, Percent_Identity=21.2880143112701, Blast_Score=91, Evalue=4e-19,
Organism=Saccharomyces cerevisiae, GI6321633, Length=328, Percent_Identity=24.6951219512195, Blast_Score=87, Evalue=4e-18,
Organism=Drosophila melanogaster, GI17864214, Length=520, Percent_Identity=26.3461538461538, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI24654573, Length=443, Percent_Identity=26.6365688487585, Blast_Score=122, Evalue=7e-28,
Organism=Drosophila melanogaster, GI24657106, Length=525, Percent_Identity=22.8571428571429, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24657102, Length=525, Percent_Identity=22.8571428571429, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI24655555, Length=460, Percent_Identity=24.3478260869565, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24655560, Length=460, Percent_Identity=24.3478260869565, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24655570, Length=460, Percent_Identity=24.3478260869565, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24655574, Length=460, Percent_Identity=24.3478260869565, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24655565, Length=460, Percent_Identity=24.3478260869565, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI21356607, Length=489, Percent_Identity=25.5623721881391, Blast_Score=104, Evalue=2e-22,
Organism=Drosophila melanogaster, GI24656367, Length=505, Percent_Identity=20.3960396039604, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357867, Length=521, Percent_Identity=19.9616122840691, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24656372, Length=327, Percent_Identity=23.2415902140673, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI19920476, Length=507, Percent_Identity=23.0769230769231, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI21356323, Length=436, Percent_Identity=22.2477064220184, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI19922058, Length=396, Percent_Identity=24.7474747474747, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24652871, Length=334, Percent_Identity=25.4491017964072, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 53942; Mature: 53942

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYIGIDLGTSSVKLVLMDTAGHIIANVSKSYPIDYPKAGWSEQNPYDWYDACMEGMKEL
CCEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LDGQDESTVSGISFGGQMHGLVILDKNDEVIRPAILWNDGRTTKQCEYLNEVIGRDKLSE
HCCCCCCCCCCEECCCCEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHHH
YTANIAFAGFTAPKILWVKENEPDNFAKIDKIMLPKDYIAYRLTGVHCTDVSDASGMLLF
HHHCEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCHHEEEEEECEEEECCCCCCCEEEE
DVKNRRWSRQMLDICGVTEAQMPRIFESSECVGTVKKDIADELGIGSEVIVAAGAGDNAA
EECCCHHHHHHHHHHCCCHHHCCHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE
AAVGTGTVGDGHCNVSLGTSGTIFISSKEFGVDSNNALHSFAHADGKYHLMGCILSAASA
EEECCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEHHHHHHHCCC
NGWWMDKILGTNDYAGEQSQITDDDLGNNNVYFLPYLMGERSPHNDEFARGTFTGMTMDT
CCEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCEECC
ERKDMTQAVLEGVAFAIRDCFEVAKSLGIRVESTRMCGGGAKSELWCKIMANVLGIPVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHH
LESEEGPAMGAAMLAMVAAGEYNCVEDASNALVKVRKTIRPDEKIIERYEDKYNKFRCIY
HCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEH
PAMKNVFRTINE
HHHHHHHHHHCC
>Mature Secondary Structure
MNYIGIDLGTSSVKLVLMDTAGHIIANVSKSYPIDYPKAGWSEQNPYDWYDACMEGMKEL
CCEEEEEECCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LDGQDESTVSGISFGGQMHGLVILDKNDEVIRPAILWNDGRTTKQCEYLNEVIGRDKLSE
HCCCCCCCCCCEECCCCEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHHH
YTANIAFAGFTAPKILWVKENEPDNFAKIDKIMLPKDYIAYRLTGVHCTDVSDASGMLLF
HHHCEEEEECCCCEEEEEECCCCCCHHHHHHHCCCCHHEEEEEECEEEECCCCCCCEEEE
DVKNRRWSRQMLDICGVTEAQMPRIFESSECVGTVKKDIADELGIGSEVIVAAGAGDNAA
EECCCHHHHHHHHHHCCCHHHCCHHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCE
AAVGTGTVGDGHCNVSLGTSGTIFISSKEFGVDSNNALHSFAHADGKYHLMGCILSAASA
EEECCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCHHHHHHHCCCCEEEHHHHHHHCCC
NGWWMDKILGTNDYAGEQSQITDDDLGNNNVYFLPYLMGERSPHNDEFARGTFTGMTMDT
CCEEHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCEEECCEECC
ERKDMTQAVLEGVAFAIRDCFEVAKSLGIRVESTRMCGGGAKSELWCKIMANVLGIPVEL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHCCCHHH
LESEEGPAMGAAMLAMVAAGEYNCVEDASNALVKVRKTIRPDEKIIERYEDKYNKFRCIY
HCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEH
PAMKNVFRTINE
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 2994009 [H]