| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is pyrE [H]
Identifier: 238916486
GI number: 238916486
Start: 549234
End: 549965
Strand: Direct
Name: pyrE [H]
Synonym: EUBELI_00543
Alternate gene names: 238916486
Gene position: 549234-549965 (Clockwise)
Preceding gene: 238916485
Following gene: 238916487
Centisome position: 25.61
GC content: 42.08
Gene sequence:
>732_bases ATGAAGCAGTGCCGCCGGACAGCGGGGCTGAATAAGGAGGATATAATGGAGCAGTATAAGCAGGAATTTATAGATTTCAT GGTAGAGAGTGATGTGTTAAAGTTTGGAGATTTTACTTTAAAGAGTGGAAGAAAGTCACCTTTCTTCATGAACGCAGGTG CGTATGTTACAGGAACACAGCTTGCAAGACTTGGTGAGTATTATGCAAAGGCTATTCATGAAACATATGGTGATGATTTT GATGTACTGTTCGGACCAGCATATAAGGGAATTCCAATCAGCGTAGTTACAGCAGTTGCATATGCAAAGCTTTACGGCAA GGAAGTAAGATACTGCTCAGACCGTAAGGAAGAGAAGGACCATGGTGCTGATAAGGGCGGATTTCTCGGAAGCAAGTTAA AGGATGGCGACAGAGTCATTATGATAGAAGATGTAACAACATCTGGTAAGTCGATGGAAGAGACAGTTCCTAAGGTAAGA GGGGCAGCAGATGTTACTATTGTAGGACTTATGGTTTCACTTAACCGTATGGAAGTAGGCCTTGGCGGAAAGGTGAGTGC GCTTGAGGAGATTAAGGAAAGATACGGTTTCCCAACAAGCGCAATTGTATCTATGGCAGATGTTGTAGAACACCTTTACA ATAAAGAGTGTGAGGGTAAGGTAGTTATTGATGATGCACTAAAAGCAGCAATTGACAAGTATTACGCAGAATATGGTGTT AAGAACGCATAA
Upstream 100 bases:
>100_bases ATAGGATTTTGATGAGCAGATTTTAATATGCAGATTTAATGTTCCAAAGACGCATTGAAACGAGAAAACATTTATGATAA AATAAAAATCAATATTGAAT
Downstream 100 bases:
>100_bases AACTGATGTTAATGGAGGGTTAACTATGGAAGAGAATCTTTATAAGAAATTAAAGTCAGTAGGAGCTTCTAATCTTGTAT TTGGTATCCTGATAATACTC
Product: orotate phosphoribosyltransferase
Products: NA
Alternate protein names: OPRT; OPRTase [H]
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MKQCRRTAGLNKEDIMEQYKQEFIDFMVESDVLKFGDFTLKSGRKSPFFMNAGAYVTGTQLARLGEYYAKAIHETYGDDF DVLFGPAYKGIPISVVTAVAYAKLYGKEVRYCSDRKEEKDHGADKGGFLGSKLKDGDRVIMIEDVTTSGKSMEETVPKVR GAADVTIVGLMVSLNRMEVGLGGKVSALEEIKERYGFPTSAIVSMADVVEHLYNKECEGKVVIDDALKAAIDKYYAEYGV KNA
Sequences:
>Translated_243_residues MKQCRRTAGLNKEDIMEQYKQEFIDFMVESDVLKFGDFTLKSGRKSPFFMNAGAYVTGTQLARLGEYYAKAIHETYGDDF DVLFGPAYKGIPISVVTAVAYAKLYGKEVRYCSDRKEEKDHGADKGGFLGSKLKDGDRVIMIEDVTTSGKSMEETVPKVR GAADVTIVGLMVSLNRMEVGLGGKVSALEEIKERYGFPTSAIVSMADVVEHLYNKECEGKVVIDDALKAAIDKYYAEYGV KNA >Mature_243_residues MKQCRRTAGLNKEDIMEQYKQEFIDFMVESDVLKFGDFTLKSGRKSPFFMNAGAYVTGTQLARLGEYYAKAIHETYGDDF DVLFGPAYKGIPISVVTAVAYAKLYGKEVRYCSDRKEEKDHGADKGGFLGSKLKDGDRVIMIEDVTTSGKSMEETVPKVR GAADVTIVGLMVSLNRMEVGLGGKVSALEEIKERYGFPTSAIVSMADVVEHLYNKECEGKVVIDDALKAAIDKYYAEYGV KNA
Specific function: Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) [H]
COG id: COG0461
COG function: function code F; Orotate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrE subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790073, Length=225, Percent_Identity=43.1111111111111, Blast_Score=176, Evalue=9e-46, Organism=Saccharomyces cerevisiae, GI6323530, Length=235, Percent_Identity=36.1702127659575, Blast_Score=146, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6323927, Length=231, Percent_Identity=35.9307359307359, Blast_Score=142, Evalue=7e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004467 - InterPro: IPR023031 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.10 [H]
Molecular weight: Translated: 26891; Mature: 26891
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQCRRTAGLNKEDIMEQYKQEFIDFMVESDVLKFGDFTLKSGRKSPFFMNAGAYVTGTQ CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCCCEEHHHH LARLGEYYAKAIHETYGDDFDVLFGPAYKGIPISVVTAVAYAKLYGKEVRYCSDRKEEKD HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH HGADKGGFLGSKLKDGDRVIMIEDVTTSGKSMEETVPKVRGAADVTIVGLMVSLNRMEVG CCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEC LGGKVSALEEIKERYGFPTSAIVSMADVVEHLYNKECEGKVVIDDALKAAIDKYYAEYGV CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCC KNA CCC >Mature Secondary Structure MKQCRRTAGLNKEDIMEQYKQEFIDFMVESDVLKFGDFTLKSGRKSPFFMNAGAYVTGTQ CCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCEEECCCCEEHHHH LARLGEYYAKAIHETYGDDFDVLFGPAYKGIPISVVTAVAYAKLYGKEVRYCSDRKEEKD HHHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH HGADKGGFLGSKLKDGDRVIMIEDVTTSGKSMEETVPKVRGAADVTIVGLMVSLNRMEVG CCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEC LGGKVSALEEIKERYGFPTSAIVSMADVVEHLYNKECEGKVVIDDALKAAIDKYYAEYGV CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHCC KNA CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA