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The map label for this gene is pyrF [H]

Identifier: 238916475

GI number: 238916475

Start: 539108

End: 540031

Strand: Direct

Name: pyrF [H]

Synonym: EUBELI_00532

Alternate gene names: 238916475

Gene position: 539108-540031 (Clockwise)

Preceding gene: 238916474

Following gene: 238916476

Centisome position: 25.14

GC content: 40.58

Gene sequence:

>924_bases
ATGATTAAGAAGCTTGTTGATAAGATTGTAGAGACTAATGCACCAATAGTTGTAGGACTTGATCCAATGATGAAGTATCT
TCCAAAGCATCTTGCAGATGTTGCATTTGAGCAGTATGGTGAGACACTTGAGGGAGCAGCAGAGGCTATATGGCAGTATA
ACAAAGGTATTATAGATAATATATATGACATTGTTCCAGCTGTTAAACCACAGATTGCAATGTATGAGCAGTTTGGAATT
GAAGGACTTAAGGCATTCAAGAAAACAGTTGATTACTGTCACGAGAAAGGCATGATTGTTATCGGTGATGTTAAGAGAGG
TGATATTGGTTCAACTTCTGAGGCTTATGCGGTAGCACATCTTGGAAAGGTAAATGTTGGATCTAAGGCAATTACACCTT
TTGACGAAGATTTTGCAACTGTTAATCCATATCTTGGCTCTGATGGAATCAATCCATTTATTAAGGTTTGTAATGAGCAG
GACAGAGGTATATTTATACTTGTTAAGACTTCTAATCCTTCAAGCGGAGAATTCCAGGATCAGCTTATCAACGGAAGACC
ATTATACGAGTTAGTTGGTGAGAAGGTTAATGAGTGGGGAGCTTCAAGCATGGACGGAGATTACAGTAATGTAGGTGCGG
TTGTTGGAGCTACTTACCCAGAGATGGGAAGAGTATTAAGAAAGGTTATGCCTAAGGCATATATTCTTGTGCCGGGATAT
GGCGCACAGGGCGGACAGGGAAAGGACCTTGTTGATTTCTTTAATCCTGACGGACTTGGAGCAATCGTAAACAGCTCAAG
AGGAATTATTGCAGCATATACTAAGGAGCAGTATGCGAAGTTTGGTGAGAAGAATTTCGGAGAAGCTTCAAGACAGGCTG
CTCTTGATATGATTGCTGATATCAACGGAGCACTTGGCAAGTAA

Upstream 100 bases:

>100_bases
TTCAGACCATAATGGAACAGAAATTCTTATTGAAAGAGAAGTTCCAAAGTTGTAGAATAAAGTGATTTTGCGTATGAATT
AAGGAGGCTAAAGTAGATTA

Downstream 100 bases:

>100_bases
TTATACATATTTATACACAGTTTAATAATGGAGATTATTATGGCGTACAGAGAAAATGCGAAGATTCTTAAGGCAGATTG
TCTTGCTGACGGAGTCTATG

Product: orotidine-5-phosphate decarboxylase

Products: NA

Alternate protein names: OMP decarboxylase; OMPDCase; OMPdecase [H]

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MIKKLVDKIVETNAPIVVGLDPMMKYLPKHLADVAFEQYGETLEGAAEAIWQYNKGIIDNIYDIVPAVKPQIAMYEQFGI
EGLKAFKKTVDYCHEKGMIVIGDVKRGDIGSTSEAYAVAHLGKVNVGSKAITPFDEDFATVNPYLGSDGINPFIKVCNEQ
DRGIFILVKTSNPSSGEFQDQLINGRPLYELVGEKVNEWGASSMDGDYSNVGAVVGATYPEMGRVLRKVMPKAYILVPGY
GAQGGQGKDLVDFFNPDGLGAIVNSSRGIIAAYTKEQYAKFGEKNFGEASRQAALDMIADINGALGK

Sequences:

>Translated_307_residues
MIKKLVDKIVETNAPIVVGLDPMMKYLPKHLADVAFEQYGETLEGAAEAIWQYNKGIIDNIYDIVPAVKPQIAMYEQFGI
EGLKAFKKTVDYCHEKGMIVIGDVKRGDIGSTSEAYAVAHLGKVNVGSKAITPFDEDFATVNPYLGSDGINPFIKVCNEQ
DRGIFILVKTSNPSSGEFQDQLINGRPLYELVGEKVNEWGASSMDGDYSNVGAVVGATYPEMGRVLRKVMPKAYILVPGY
GAQGGQGKDLVDFFNPDGLGAIVNSSRGIIAAYTKEQYAKFGEKNFGEASRQAALDMIADINGALGK
>Mature_307_residues
MIKKLVDKIVETNAPIVVGLDPMMKYLPKHLADVAFEQYGETLEGAAEAIWQYNKGIIDNIYDIVPAVKPQIAMYEQFGI
EGLKAFKKTVDYCHEKGMIVIGDVKRGDIGSTSEAYAVAHLGKVNVGSKAITPFDEDFATVNPYLGSDGINPFIKVCNEQ
DRGIFILVKTSNPSSGEFQDQLINGRPLYELVGEKVNEWGASSMDGDYSNVGAVVGATYPEMGRVLRKVMPKAYILVPGY
GAQGGQGKDLVDFFNPDGLGAIVNSSRGIIAAYTKEQYAKFGEKNFGEASRQAALDMIADINGALGK

Specific function: Unknown

COG id: COG0284

COG function: function code F; Orotidine-5'-phosphate decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OMP decarboxylase family. Type 2 subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR011995
- InterPro:   IPR001754
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00215 OMPdecase [H]

EC number: =4.1.1.23 [H]

Molecular weight: Translated: 33280; Mature: 33280

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKLVDKIVETNAPIVVGLDPMMKYLPKHLADVAFEQYGETLEGAAEAIWQYNKGIIDN
CHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IYDIVPAVKPQIAMYEQFGIEGLKAFKKTVDYCHEKGMIVIGDVKRGDIGSTSEAYAVAH
HHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHH
LGKVNVGSKAITPFDEDFATVNPYLGSDGINPFIKVCNEQDRGIFILVKTSNPSSGEFQD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCHHH
QLINGRPLYELVGEKVNEWGASSMDGDYSNVGAVVGATYPEMGRVLRKVMPKAYILVPGY
HHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCC
GAQGGQGKDLVDFFNPDGLGAIVNSSRGIIAAYTKEQYAKFGEKNFGEASRQAALDMIAD
CCCCCCCCCHHHHCCCCCCCCEECCCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHH
INGALGK
CCCCCCC
>Mature Secondary Structure
MIKKLVDKIVETNAPIVVGLDPMMKYLPKHLADVAFEQYGETLEGAAEAIWQYNKGIIDN
CHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
IYDIVPAVKPQIAMYEQFGIEGLKAFKKTVDYCHEKGMIVIGDVKRGDIGSTSEAYAVAH
HHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHH
LGKVNVGSKAITPFDEDFATVNPYLGSDGINPFIKVCNEQDRGIFILVKTSNPSSGEFQD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCHHH
QLINGRPLYELVGEKVNEWGASSMDGDYSNVGAVVGATYPEMGRVLRKVMPKAYILVPGY
HHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEECCC
GAQGGQGKDLVDFFNPDGLGAIVNSSRGIIAAYTKEQYAKFGEKNFGEASRQAALDMIAD
CCCCCCCCCHHHHCCCCCCCCEECCCCCEEEEECHHHHHHHCCCCCCHHHHHHHHHHHHH
INGALGK
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA