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The map label for this gene is rpmC

Identifier: 238916273

GI number: 238916273

Start: 339494

End: 339694

Strand: Direct

Name: rpmC

Synonym: EUBELI_00307

Alternate gene names: 238916273

Gene position: 339494-339694 (Clockwise)

Preceding gene: 238916272

Following gene: 238916274

Centisome position: 15.83

GC content: 34.83

Gene sequence:

>201_bases
GTGAAAATTAATAAGTATGTAGAAGATTTAAAGGCAAAATCAGCTGCAGAGTTAAATGAAGAATTAGTAGCTGCTAAGAA
GGAACTTTTCAATTTAAGATTCCAGAACGCAACAAATCAGCTGGACAACACAAGCAGAATTAAGGAAGTTCGTAAGAACA
TCGCTAGAATCCAGACTGTAATTGCACAGAAGAATGCTTAA

Upstream 100 bases:

>100_bases
GCTGAAGAAACAGCAAGAGAAGCTTTACGTCTCGCAACACATAAGCTTCCTTGCAAGTGCAAGATTGTTTCACGTGCAGA
CTTAGAAGGCGGTGATAACA

Downstream 100 bases:

>100_bases
TTAAGGCATATAGACTTAGATATCCTAAGAAAGGAGAATAACTGTGGAAGAGAGAAATTTAAGAAAAACTCGTACAGGTA
AGGTTATAAGCAATAAGATG

Product: 50S ribosomal protein L29

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 66; Mature: 66

Protein sequence:

>66_residues
MKINKYVEDLKAKSAAELNEELVAAKKELFNLRFQNATNQLDNTSRIKEVRKNIARIQTVIAQKNA

Sequences:

>Translated_66_residues
MKINKYVEDLKAKSAAELNEELVAAKKELFNLRFQNATNQLDNTSRIKEVRKNIARIQTVIAQKNA
>Mature_66_residues
MKINKYVEDLKAKSAAELNEELVAAKKELFNLRFQNATNQLDNTSRIKEVRKNIARIQTVIAQKNA

Specific function: Unknown

COG id: COG0255

COG function: function code J; Ribosomal protein L29

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L29P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL29_EUBE2 (C4Z2T8)

Other databases:

- EMBL:   CP001104
- RefSeq:   YP_002929790.1
- GeneID:   7957200
- GenomeReviews:   CP001104_GR
- KEGG:   eel:EUBELI_00307
- OMA:   IEDIRAM
- ProtClustDB:   PRK00306
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00374_B
- InterPro:   IPR001854
- InterPro:   IPR018254
- Gene3D:   G3DSA:1.10.287.310
- TIGRFAMs:   TIGR00012

Pfam domain/function: PF00831 Ribosomal_L29; SSF46561 Ribosomal_L29

EC number: NA

Molecular weight: Translated: 7574; Mature: 7574

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS00579 RIBOSOMAL_L29

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINKYVEDLKAKSAAELNEELVAAKKELFNLRFQNATNQLDNTSRIKEVRKNIARIQTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IAQKNA
HHHCCC
>Mature Secondary Structure
MKINKYVEDLKAKSAAELNEELVAAKKELFNLRFQNATNQLDNTSRIKEVRKNIARIQTV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
IAQKNA
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA