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The map label for this gene is nusG [H]

Identifier: 238916244

GI number: 238916244

Start: 307794

End: 308330

Strand: Direct

Name: nusG [H]

Synonym: EUBELI_00278

Alternate gene names: 238916244

Gene position: 307794-308330 (Clockwise)

Preceding gene: 238916243

Following gene: 238916245

Centisome position: 14.35

GC content: 40.6

Gene sequence:

>537_bases
ATGGATGACGCAAAATGGTATGTAGTTCACACTTACTCAGGTTATGAGAATAAGGTGAAAGCTAACATTGAAAAGACAGT
TGAAAACAGAAATCTTCACGATCAGATTCTTGAAGTTATCGTTCCGCTTGAAACAGTAGTGGAGATTAAAGATGGCTCTA
AGAAAGCTGCTCAGAAGAAGATGTTTCCTGGATACGTTCTTGTAAAGATGGTAATGAACGACGATAGTTGGTATGTTGTC
AGAAATACAAGAGGTGTTACAGGGTTTGTTGGTCCTGGATCAAAGCCAGTACCACTTACACCAACAGAGATTAAGAATCT
TGGCATAAGCCTTGAGGAAGAACAGGAAGTTAAGCCTGTTATCCAGTTCGCTGGCAAGGTCGGCGATAAGGTTATGATCC
TCTCTGGTGCATGGGAAGATACAGTTGGTGAGATTACTAACATTAATGAGGGCAAGCAGTGCCTTACAATTAATGTTGAG
ATGTTCGGTCGTGAAACACCGGTCGAAATTGATTTCACAGATGTGAAGTTATTGTAA

Upstream 100 bases:

>100_bases
ATTGGCTGTATCCGTATTATTAGGTGTAATCATTGCAGTTGTGGATTTGATTGTCCGCTTTGGAATTGAGTTCATTGTAA
AATAAGGAATAGGTGATTGT

Downstream 100 bases:

>100_bases
GAAGCAGTCCCGATCCTGGGACGTGGGAGACCAGAATGAATTTACTGCGTAAATTCATTCACAAGAATTGCCCGATGGTC
AATTCTTGAGGAGTGAATAT

Product: transcriptional antiterminator NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MDDAKWYVVHTYSGYENKVKANIEKTVENRNLHDQILEVIVPLETVVEIKDGSKKAAQKKMFPGYVLVKMVMNDDSWYVV
RNTRGVTGFVGPGSKPVPLTPTEIKNLGISLEEEQEVKPVIQFAGKVGDKVMILSGAWEDTVGEITNINEGKQCLTINVE
MFGRETPVEIDFTDVKLL

Sequences:

>Translated_178_residues
MDDAKWYVVHTYSGYENKVKANIEKTVENRNLHDQILEVIVPLETVVEIKDGSKKAAQKKMFPGYVLVKMVMNDDSWYVV
RNTRGVTGFVGPGSKPVPLTPTEIKNLGISLEEEQEVKPVIQFAGKVGDKVMILSGAWEDTVGEITNINEGKQCLTINVE
MFGRETPVEIDFTDVKLL
>Mature_178_residues
MDDAKWYVVHTYSGYENKVKANIEKTVENRNLHDQILEVIVPLETVVEIKDGSKKAAQKKMFPGYVLVKMVMNDDSWYVV
RNTRGVTGFVGPGSKPVPLTPTEIKNLGISLEEEQEVKPVIQFAGKVGDKVMILSGAWEDTVGEITNINEGKQCLTINVE
MFGRETPVEIDFTDVKLL

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=173, Percent_Identity=38.150289017341, Blast_Score=131, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 19944; Mature: 19944

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDAKWYVVHTYSGYENKVKANIEKTVENRNLHDQILEVIVPLETVVEIKDGSKKAAQKK
CCCCEEEEEEEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHCHHHEEEECCCCHHHHHHH
MFPGYVLVKMVMNDDSWYVVRNTRGVTGFVGPGSKPVPLTPTEIKNLGISLEEEQEVKPV
CCCCEEEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHH
IQFAGKVGDKVMILSGAWEDTVGEITNINEGKQCLTINVEMFGRETPVEIDFTDVKLL
HHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEEEEEECCCCCEEEEECEEEEC
>Mature Secondary Structure
MDDAKWYVVHTYSGYENKVKANIEKTVENRNLHDQILEVIVPLETVVEIKDGSKKAAQKK
CCCCEEEEEEEECCCCCEEHHHHHHHHHCCCHHHHHHHHHHCHHHEEEECCCCHHHHHHH
MFPGYVLVKMVMNDDSWYVVRNTRGVTGFVGPGSKPVPLTPTEIKNLGISLEEEQEVKPV
CCCCEEEEEEEECCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCCHHHHHH
IQFAGKVGDKVMILSGAWEDTVGEITNINEGKQCLTINVEMFGRETPVEIDFTDVKLL
HHHHHCCCCEEEEEECCCCCCHHHHCCCCCCCEEEEEEEEEECCCCCEEEEECEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]