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The map label for this gene is hag [H]

Identifier: 238916230

GI number: 238916230

Start: 294550

End: 295362

Strand: Direct

Name: hag [H]

Synonym: EUBELI_00264

Alternate gene names: 238916230

Gene position: 294550-295362 (Clockwise)

Preceding gene: 238916229

Following gene: 238916231

Centisome position: 13.74

GC content: 39.85

Gene sequence:

>813_bases
ATGGTAGTACAGCATAACCTTTCAGCAATGAACACAAACAGACAGATGGGAATAGTTACAGATGCCCTTCAGAAGTCAAC
AGAGAAGTTATCATCAGGATATAAGATTAACAGAGCAGCAGATGATGCAGCAGGTCTTTCAATTTCAGAAAAGATGAGAG
CACAGATTAGAGGCCTTGATAAGGCATCTGATAATGCACAGGATGGTATCTCTCTTATCCAGGTAGCTGAAGGTGCTCTT
AATGAGACACATTCAATTCTTCAGAGAATGAATGAGTTAGCAACACAGGCTGCTAATGATACTAACACATCAACAGACAG
AACTGCAATAAAGGCTGAGATTGATCAGTTGACATCAGAAATCAACAGAATCCAGTCAACAACACAGTTCAATACACAGA
ATCTGTTAGATGGAAAGTTCACAGGAAAGAATCTTCAGATTGGTTCTCTTAAGGGACAGACAATCAAGATCAGCATCAGC
AACATGAATGCTAAAACATTAGGTGTTAGTGGACTTACGGTTGATAAGAACAGTACAGCTGGAATATCAATGTCAAAGAT
TCAGGCAGCTATTGATAAGGTATCAACACAGAGATCTAATCTTGGTGCTCTTCAGAACAGACTTGAGCATACTATCAACA
ATCTTGATACAACATCAGAGAATACATCAGCAGCAGAGTCTCGTATCCGTGATACAGATATGGCTGATGAGATGGTACGA
TACAGCAAGAACAACATCCTTTCACAGGCTGGAAATTCAATGCTTGCTCAGGCTAATCAGCAGACACAGGGAGTACTTTC
ACTTTTACAGTAA

Upstream 100 bases:

>100_bases
TCCGATAAATAATACATAAGTGATAAACAGATAAGAATAATAAATAATGTTTATTATCTGATATAAAAATGGAGTTATAC
ATATCAAGGAGGAATTAATT

Downstream 100 bases:

>100_bases
TAACAATTGAGTAGTTTAAGCTGGTGCTTTGCGATAATAATCGTATTAGTACCAGCTTTTTTGTATATAAAATATATCGG
GTAAATGATTTATGAAAGAA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MVVQHNLSAMNTNRQMGIVTDALQKSTEKLSSGYKINRAADDAAGLSISEKMRAQIRGLDKASDNAQDGISLIQVAEGAL
NETHSILQRMNELATQAANDTNTSTDRTAIKAEIDQLTSEINRIQSTTQFNTQNLLDGKFTGKNLQIGSLKGQTIKISIS
NMNAKTLGVSGLTVDKNSTAGISMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTDMADEMVR
YSKNNILSQAGNSMLAQANQQTQGVLSLLQ

Sequences:

>Translated_270_residues
MVVQHNLSAMNTNRQMGIVTDALQKSTEKLSSGYKINRAADDAAGLSISEKMRAQIRGLDKASDNAQDGISLIQVAEGAL
NETHSILQRMNELATQAANDTNTSTDRTAIKAEIDQLTSEINRIQSTTQFNTQNLLDGKFTGKNLQIGSLKGQTIKISIS
NMNAKTLGVSGLTVDKNSTAGISMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTDMADEMVR
YSKNNILSQAGNSMLAQANQQTQGVLSLLQ
>Mature_270_residues
MVVQHNLSAMNTNRQMGIVTDALQKSTEKLSSGYKINRAADDAAGLSISEKMRAQIRGLDKASDNAQDGISLIQVAEGAL
NETHSILQRMNELATQAANDTNTSTDRTAIKAEIDQLTSEINRIQSTTQFNTQNLLDGKFTGKNLQIGSLKGQTIKISIS
NMNAKTLGVSGLTVDKNSTAGISMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTDMADEMVR
YSKNNILSQAGNSMLAQANQQTQGVLSLLQ

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=158, Percent_Identity=44.9367088607595, Blast_Score=122, Evalue=2e-29,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 29116; Mature: 29116

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVQHNLSAMNTNRQMGIVTDALQKSTEKLSSGYKINRAADDAAGLSISEKMRAQIRGLD
CEECCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCHHHHHHHHHHCCC
KASDNAQDGISLIQVAEGALNETHSILQRMNELATQAANDTNTSTDRTAIKAEIDQLTSE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
INRIQSTTQFNTQNLLDGKFTGKNLQIGSLKGQTIKISISNMNAKTLGVSGLTVDKNSTA
HHHHHHHHHCCHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEECCCCEEECCCCCC
GISMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTDMADEMVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
YSKNNILSQAGNSMLAQANQQTQGVLSLLQ
HHHHHHHHHHCCHHHHHHCHHHHHHHHHHC
>Mature Secondary Structure
MVVQHNLSAMNTNRQMGIVTDALQKSTEKLSSGYKINRAADDAAGLSISEKMRAQIRGLD
CEECCCCHHHCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCHHHHHHHHHHCCC
KASDNAQDGISLIQVAEGALNETHSILQRMNELATQAANDTNTSTDRTAIKAEIDQLTSE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
INRIQSTTQFNTQNLLDGKFTGKNLQIGSLKGQTIKISISNMNAKTLGVSGLTVDKNSTA
HHHHHHHHHCCHHHCCCCCCCCCCEEEECCCCCEEEEEEECCCCEEECCCCEEECCCCCC
GISMSKIQAAIDKVSTQRSNLGALQNRLEHTINNLDTTSENTSAAESRIRDTDMADEMVR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH
YSKNNILSQAGNSMLAQANQQTQGVLSLLQ
HHHHHHHHHHCCHHHHHHCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1479346; 11058132 [H]