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The map label for this gene is licD [H]

Identifier: 238916209

GI number: 238916209

Start: 269352

End: 271598

Strand: Direct

Name: licD [H]

Synonym: EUBELI_00243

Alternate gene names: 238916209

Gene position: 269352-271598 (Clockwise)

Preceding gene: 238916208

Following gene: 238916210

Centisome position: 12.56

GC content: 33.24

Gene sequence:

>2247_bases
ATGTTAGAAAAATATTTTGAAGATGAAGTCAGGGATGGCTTCTATGTTCCATCAATGATTAAACGCTCATGGGCTGTGGC
ATTAGATGTGCTTTCAGAAGTTGACAGGATATGCCGGAAATATGATATTAAGTATTACGCAGAGTGGGGAACTTTATTGG
GAGCAGTAAGACACGCAGGATTCGTACCGTGGGATGATGATCTTGATATTGCTATGCCAAGAAATGACTATATTAAATTC
TGTCAGGTTGCGAAGCAGGAATTAAAAAATGGATATGAAATATTTAATTTTAAAAATCATGATAATTTTCATCATTTTCT
TGCAAGAGTAACCTGTACCAGCAGGATATGTTTTGAGGATAAGTATTTAAAAGAACATCATGGATTTCCTTATATTGCAG
GATTGGATATATTTGTACATGATAATGTTTCAAGGGATAGAAAAAATCAGGAACATTGTGAGAAAATAGCAGAATATATA
ATAACAGTGGCTGATAATATTGCGGATGGCAGTATGAATAGTGAGCAGGAGAAAGATGCTTTAAAAAGAATCAGTCAGTT
ATGTAACTGTGATGTATCTGCATATCAAAATAAAGAGGAAGAAAGAATACAATTATATACTCTGGCAGAAAATATATTTG
CTGCATTTAAAGATGATGATTGTGATGAAATGACACAGATGATGCCTTGCAGCATGTATGGAAACCATATGAGAATTCCT
AAAAAATATTATGATGAGATAGTCAGAATTCCATTTGAGAATACGACGATTCCAGTACCGATAGGCTTTGATGCTATGCT
TAGCAAGAGATATGGAGACTATATGAAATTGGTAAGAAATACCGGTGGGCATAATTATCCGTTTTATGAATCTCAGAAAA
AGCAGTTGGAAGTACTGATGGATTTTAAATTGCCACAGTATACATTTGATGGAAAGAAAGCTGTAAGAAATGATGATGCG
GCAAATACAGGATATAAAAAAATAATAACTGATGTGATGCATAGTGTAAAAGAAGAAATTGAAAAAATCGGACATCACAT
TAACAACGGGAAATTCTGGACTGATAATCAGACGGAAGATATTATTAAAAATGTTCAGGAAAAACTTGCTGATATTCAGC
AGGCTTTGATTGAAACTGGCAATCTTATAGAACAGATAAAAGGCGAAAATACGCAAAGTGTCAAATGTATTGAAAAATTT
TGTGACACATTATATATGGTTTATCAGGGAAATACATATGACATAACAGGTGAGTTTGATAATTTGAATTCTGTTATAGA
AAATGAAATAATAATGCGGAAAGAAATAGTTATTATGCCGTATAGAGCTGCTGACTGGAGTTATGTAAAAAATATATGGG
AACAGGCAGAAAAGAATCCAGAGACAGATGTGATAGTAGCTGTATTACCATACTATTATAAGGAGTATGATGGCAGTGTA
AAGGAATATGTCAATGAACTTAATGATTTTCCAGAAGAGATAAATGCAATAGATATATGTAGTTATAATTTAGAACTCCA
TCATCCTGATATGATATATATACAGAATCCATTTGATAATGAAAATAAAGCAGTCAGCGTTTATAAAGAATACTATTCTG
ATATTTTAAAGAAGAATACTGATAAACTGGTATATGTCCAGTCATTTCATCTCGAAGAATTCAGCAGTAATGATGAGAGG
GCATATAAGAATATGTCGTCTTACTGTACGGTTCCGGGAGTGGTAAATGCTGATGAGGTATATGTACAGTCTGATAATAT
GCGAGAAATATATATTAAAAAGCTGACTGAATTCGCAGGAGATAACACAGAAGATATATGGCGCAAGAAAATATGTGTTA
AGCCGGAATGGATGAATGACAAGAAAGAAACAACCAGCCATGCAGGCGGTAAAAAGAGAATATTATTTTATACATCTATA
AGTGGCATTATGCAGAATCAGGATGGGGCGGTGGAGAAAATTGAACGGGTTCTGAAAACATTTAAACAATATTCAGAAGA
AATAGAAGTTATATGGTGTGTTCAGGAATTGGTTGATGCAGTACTCCCAAGTCTTAACAGAAAGTTATATGAATGTTTAA
ATAATATAAGGAATAATTATATGCTTGAAAAAATCGGACATGTATATAATGATAAAGATAAGAAATTGCTTTGTTCGTGT
GATGCATATTATGGAGATACATCCCCGGTTGTACAGGAGTACAGGAATAACGGGAAGCCAGTTATGATAATGGATTATAT
GGTTTAA

Upstream 100 bases:

>100_bases
AGGATCAGAGGCGCAATTATGCAGAAATTCAGGTAAGCCAGTTATGATTCAGAATGTAGAAATTTAGAACATACGATAAT
AAGGAGTGACTAGCTGCGTA

Downstream 100 bases:

>100_bases
TGTTAATGCAATAGTTGAGAATATGATATAAGGCGAGGTGCAATTAATGGGGGTATATCTGAGTCTTGGAAATGATGAAA
AAGCATATTGTATGTCGTAT

Product: lipopolysaccharide cholinephosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 748; Mature: 748

Protein sequence:

>748_residues
MLEKYFEDEVRDGFYVPSMIKRSWAVALDVLSEVDRICRKYDIKYYAEWGTLLGAVRHAGFVPWDDDLDIAMPRNDYIKF
CQVAKQELKNGYEIFNFKNHDNFHHFLARVTCTSRICFEDKYLKEHHGFPYIAGLDIFVHDNVSRDRKNQEHCEKIAEYI
ITVADNIADGSMNSEQEKDALKRISQLCNCDVSAYQNKEEERIQLYTLAENIFAAFKDDDCDEMTQMMPCSMYGNHMRIP
KKYYDEIVRIPFENTTIPVPIGFDAMLSKRYGDYMKLVRNTGGHNYPFYESQKKQLEVLMDFKLPQYTFDGKKAVRNDDA
ANTGYKKIITDVMHSVKEEIEKIGHHINNGKFWTDNQTEDIIKNVQEKLADIQQALIETGNLIEQIKGENTQSVKCIEKF
CDTLYMVYQGNTYDITGEFDNLNSVIENEIIMRKEIVIMPYRAADWSYVKNIWEQAEKNPETDVIVAVLPYYYKEYDGSV
KEYVNELNDFPEEINAIDICSYNLELHHPDMIYIQNPFDNENKAVSVYKEYYSDILKKNTDKLVYVQSFHLEEFSSNDER
AYKNMSSYCTVPGVVNADEVYVQSDNMREIYIKKLTEFAGDNTEDIWRKKICVKPEWMNDKKETTSHAGGKKRILFYTSI
SGIMQNQDGAVEKIERVLKTFKQYSEEIEVIWCVQELVDAVLPSLNRKLYECLNNIRNNYMLEKIGHVYNDKDKKLLCSC
DAYYGDTSPVVQEYRNNGKPVMIMDYMV

Sequences:

>Translated_748_residues
MLEKYFEDEVRDGFYVPSMIKRSWAVALDVLSEVDRICRKYDIKYYAEWGTLLGAVRHAGFVPWDDDLDIAMPRNDYIKF
CQVAKQELKNGYEIFNFKNHDNFHHFLARVTCTSRICFEDKYLKEHHGFPYIAGLDIFVHDNVSRDRKNQEHCEKIAEYI
ITVADNIADGSMNSEQEKDALKRISQLCNCDVSAYQNKEEERIQLYTLAENIFAAFKDDDCDEMTQMMPCSMYGNHMRIP
KKYYDEIVRIPFENTTIPVPIGFDAMLSKRYGDYMKLVRNTGGHNYPFYESQKKQLEVLMDFKLPQYTFDGKKAVRNDDA
ANTGYKKIITDVMHSVKEEIEKIGHHINNGKFWTDNQTEDIIKNVQEKLADIQQALIETGNLIEQIKGENTQSVKCIEKF
CDTLYMVYQGNTYDITGEFDNLNSVIENEIIMRKEIVIMPYRAADWSYVKNIWEQAEKNPETDVIVAVLPYYYKEYDGSV
KEYVNELNDFPEEINAIDICSYNLELHHPDMIYIQNPFDNENKAVSVYKEYYSDILKKNTDKLVYVQSFHLEEFSSNDER
AYKNMSSYCTVPGVVNADEVYVQSDNMREIYIKKLTEFAGDNTEDIWRKKICVKPEWMNDKKETTSHAGGKKRILFYTSI
SGIMQNQDGAVEKIERVLKTFKQYSEEIEVIWCVQELVDAVLPSLNRKLYECLNNIRNNYMLEKIGHVYNDKDKKLLCSC
DAYYGDTSPVVQEYRNNGKPVMIMDYMV
>Mature_748_residues
MLEKYFEDEVRDGFYVPSMIKRSWAVALDVLSEVDRICRKYDIKYYAEWGTLLGAVRHAGFVPWDDDLDIAMPRNDYIKF
CQVAKQELKNGYEIFNFKNHDNFHHFLARVTCTSRICFEDKYLKEHHGFPYIAGLDIFVHDNVSRDRKNQEHCEKIAEYI
ITVADNIADGSMNSEQEKDALKRISQLCNCDVSAYQNKEEERIQLYTLAENIFAAFKDDDCDEMTQMMPCSMYGNHMRIP
KKYYDEIVRIPFENTTIPVPIGFDAMLSKRYGDYMKLVRNTGGHNYPFYESQKKQLEVLMDFKLPQYTFDGKKAVRNDDA
ANTGYKKIITDVMHSVKEEIEKIGHHINNGKFWTDNQTEDIIKNVQEKLADIQQALIETGNLIEQIKGENTQSVKCIEKF
CDTLYMVYQGNTYDITGEFDNLNSVIENEIIMRKEIVIMPYRAADWSYVKNIWEQAEKNPETDVIVAVLPYYYKEYDGSV
KEYVNELNDFPEEINAIDICSYNLELHHPDMIYIQNPFDNENKAVSVYKEYYSDILKKNTDKLVYVQSFHLEEFSSNDER
AYKNMSSYCTVPGVVNADEVYVQSDNMREIYIKKLTEFAGDNTEDIWRKKICVKPEWMNDKKETTSHAGGKKRILFYTSI
SGIMQNQDGAVEKIERVLKTFKQYSEEIEVIWCVQELVDAVLPSLNRKLYECLNNIRNNYMLEKIGHVYNDKDKKLLCSC
DAYYGDTSPVVQEYRNNGKPVMIMDYMV

Specific function: Transfers phosphorylcholine (ChoP) from choline diphosphonucleoside to the lipopolysaccharide (LPS) [H]

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the licD transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007074 [H]

Pfam domain/function: PF04991 LicD [H]

EC number: NA

Molecular weight: Translated: 87656; Mature: 87656

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKYFEDEVRDGFYVPSMIKRSWAVALDVLSEVDRICRKYDIKYYAEWGTLLGAVRHAG
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
FVPWDDDLDIAMPRNDYIKFCQVAKQELKNGYEIFNFKNHDNFHHFLARVTCTSRICFED
CCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
KYLKEHHGFPYIAGLDIFVHDNVSRDRKNQEHCEKIAEYIITVADNIADGSMNSEQEKDA
HHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LKRISQLCNCDVSAYQNKEEERIQLYTLAENIFAAFKDDDCDEMTQMMPCSMYGNHMRIP
HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCCCCCC
KKYYDEIVRIPFENTTIPVPIGFDAMLSKRYGDYMKLVRNTGGHNYPFYESQKKQLEVLM
HHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
DFKLPQYTFDGKKAVRNDDAANTGYKKIITDVMHSVKEEIEKIGHHINNGKFWTDNQTED
HCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH
IIKNVQEKLADIQQALIETGNLIEQIKGENTQSVKCIEKFCDTLYMVYQGNTYDITGEFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCEEEECCCHH
NLNSVIENEIIMRKEIVIMPYRAADWSYVKNIWEQAEKNPETDVIVAVLPYYYKEYDGSV
HHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCHH
KEYVNELNDFPEEINAIDICSYNLELHHPDMIYIQNPFDNENKAVSVYKEYYSDILKKNT
HHHHHHHHCCHHHCCEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
DKLVYVQSFHLEEFSSNDERAYKNMSSYCTVPGVVNADEVYVQSDNMREIYIKKLTEFAG
CCEEEEEEECHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHC
DNTEDIWRKKICVKPEWMNDKKETTSHAGGKKRILFYTSISGIMQNQDGAVEKIERVLKT
CCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEEEEHHHHHCCCCCHHHHHHHHHHH
FKQYSEEIEVIWCVQELVDAVLPSLNRKLYECLNNIRNNYMLEKIGHVYNDKDKKLLCSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
DAYYGDTSPVVQEYRNNGKPVMIMDYMV
CCCCCCCCHHHHHHHCCCCCEEEEECCC
>Mature Secondary Structure
MLEKYFEDEVRDGFYVPSMIKRSWAVALDVLSEVDRICRKYDIKYYAEWGTLLGAVRHAG
CCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC
FVPWDDDLDIAMPRNDYIKFCQVAKQELKNGYEIFNFKNHDNFHHFLARVTCTSRICFED
CCCCCCCCCEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHH
KYLKEHHGFPYIAGLDIFVHDNVSRDRKNQEHCEKIAEYIITVADNIADGSMNSEQEKDA
HHHHHHCCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
LKRISQLCNCDVSAYQNKEEERIQLYTLAENIFAAFKDDDCDEMTQMMPCSMYGNHMRIP
HHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCCCCCC
KKYYDEIVRIPFENTTIPVPIGFDAMLSKRYGDYMKLVRNTGGHNYPFYESQKKQLEVLM
HHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
DFKLPQYTFDGKKAVRNDDAANTGYKKIITDVMHSVKEEIEKIGHHINNGKFWTDNQTED
HCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHH
IIKNVQEKLADIQQALIETGNLIEQIKGENTQSVKCIEKFCDTLYMVYQGNTYDITGEFD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEEEEECCEEEECCCHH
NLNSVIENEIIMRKEIVIMPYRAADWSYVKNIWEQAEKNPETDVIVAVLPYYYKEYDGSV
HHHHHHHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHCCHH
KEYVNELNDFPEEINAIDICSYNLELHHPDMIYIQNPFDNENKAVSVYKEYYSDILKKNT
HHHHHHHHCCHHHCCEEEEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCC
DKLVYVQSFHLEEFSSNDERAYKNMSSYCTVPGVVNADEVYVQSDNMREIYIKKLTEFAG
CCEEEEEEECHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHC
DNTEDIWRKKICVKPEWMNDKKETTSHAGGKKRILFYTSISGIMQNQDGAVEKIERVLKT
CCHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEEEEEEHHHHHCCCCCHHHHHHHHHHH
FKQYSEEIEVIWCVQELVDAVLPSLNRKLYECLNNIRNNYMLEKIGHVYNDKDKKLLCSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
DAYYGDTSPVVQEYRNNGKPVMIMDYMV
CCCCCCCCHHHHHHHCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800; 10632893 [H]