| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
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The map label for this gene is 238916154
Identifier: 238916154
GI number: 238916154
Start: 216213
End: 216779
Strand: Direct
Name: 238916154
Synonym: EUBELI_00188
Alternate gene names: NA
Gene position: 216213-216779 (Clockwise)
Preceding gene: 238916153
Following gene: 238916155
Centisome position: 10.08
GC content: 40.92
Gene sequence:
>567_bases ATGACCAGACATCACATTTGTGCAAAAATTTATATAAAATCCCATAAACCGCTTGTCCTAAAGCTAACTTCAAGTCGTAT CATACAGGTATCAAATAATTTACATTTTTATGAAAGAAGAGGTGTTATTATCATGAAATTTATGGATAAGGATGATTTTG AAAAGCAGAATGTCTTCGGAACAGGTCAGGCAAATACAGCATATGCTAAGTATTTTATTGGTGATTCTTTCCTGAATCCG CTGACAGATCCTAAGTGCGGGCTTTTTCTTGCAAATGTGACTTTTGAGCCGGGATGCCGTAATAACTGGCATATCCATCA TGCAACAAAGGGCGGCGGACAGATGCTTATATGTACAGCTGGAGAGGGCTGGTATCAGGAAGAGGGCAAGGAGCCTGTAA GCCTTGTGCCGGGAACTGTAATCGCAATTCCACCAGAAGTTAAGCACTGGCATGGAGCTAAGAAGGACAGCTGGTTTTCA CATATTGCTGCAGAGATTCCGGGCGAGAATACAAGTAATGAATGGTGTGAGCCTGTAACTGATGAAGAATATAACAGATT AGGATAA
Upstream 100 bases:
>100_bases GGGGTGAGAAATAGCGGAGGATTGGACCTTGAAGCGGAGGGGAGGCACGCGGAAGTCCAAAACGCAAGTCGGTGCACAAG AGCGTAAGACCAGACATCAC
Downstream 100 bases:
>100_bases TGTCTTATATGGCAGGAATGGAGGATTACAATGGCTAAGGAAGTATGGAAAGAAGATTAATTGAAAGGTTTAGGTAAGAA CTGATGAGTGTTTTGAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Cupin 2 Domain-Containing Protein; Carboxymuconolactone Decarboxylase; 4-Carboxymuconolactone Decarboxylase; Cupin 2 Conserved Barrel Domain-Containing Protein; Cupin Domain Protein; Cupin 2 Barrel; Cupin Family Protein; Transcriptional Regulator; Cupin Domain-Containing Protein; Double-Stranded Beta-Helix-Like Protein; Carboxymuconolactone Decarboxylase Family Protein; Cupin Region; Cupin 2 Barrel Domain-Containing Protein; RmlC-Type Cupin; Gamma-Carboxymuconolactone Decarboxylase Subunit; Exported RmlC-Type Cupin; Conserved Protein; LOW QUALITY PROTEIN Cupin Domain-Containing Protein; ABC-2 Type Transporter; LOW QUALITY PROTEIN Carboxymuconolactone Decarboxylase; Double-Stranded Beta-Helix Protein; Secreted Protein
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MTRHHICAKIYIKSHKPLVLKLTSSRIIQVSNNLHFYERRGVIIMKFMDKDDFEKQNVFGTGQANTAYAKYFIGDSFLNP LTDPKCGLFLANVTFEPGCRNNWHIHHATKGGGQMLICTAGEGWYQEEGKEPVSLVPGTVIAIPPEVKHWHGAKKDSWFS HIAAEIPGENTSNEWCEPVTDEEYNRLG
Sequences:
>Translated_188_residues MTRHHICAKIYIKSHKPLVLKLTSSRIIQVSNNLHFYERRGVIIMKFMDKDDFEKQNVFGTGQANTAYAKYFIGDSFLNP LTDPKCGLFLANVTFEPGCRNNWHIHHATKGGGQMLICTAGEGWYQEEGKEPVSLVPGTVIAIPPEVKHWHGAKKDSWFS HIAAEIPGENTSNEWCEPVTDEEYNRLG >Mature_187_residues TRHHICAKIYIKSHKPLVLKLTSSRIIQVSNNLHFYERRGVIIMKFMDKDDFEKQNVFGTGQANTAYAKYFIGDSFLNPL TDPKCGLFLANVTFEPGCRNNWHIHHATKGGGQMLICTAGEGWYQEEGKEPVSLVPGTVIAIPPEVKHWHGAKKDSWFSH IAAEIPGENTSNEWCEPVTDEEYNRLG
Specific function: Unknown
COG id: COG1917
COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21287; Mature: 21156
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRHHICAKIYIKSHKPLVLKLTSSRIIQVSNNLHFYERRGVIIMKFMDKDDFEKQNVFG CCCCEEEEEEEECCCCCEEEEECCCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCEEE TGQANTAYAKYFIGDSFLNPLTDPKCGLFLANVTFEPGCRNNWHIHHATKGGGQMLICTA CCCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEC GEGWYQEEGKEPVSLVPGTVIAIPPEVKHWHGAKKDSWFSHIAAEIPGENTSNEWCEPVT CCCCHHHCCCCCEEECCCEEEEECCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC DEEYNRLG CCCHHCCC >Mature Secondary Structure TRHHICAKIYIKSHKPLVLKLTSSRIIQVSNNLHFYERRGVIIMKFMDKDDFEKQNVFG CCCEEEEEEEECCCCCEEEEECCCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCEEE TGQANTAYAKYFIGDSFLNPLTDPKCGLFLANVTFEPGCRNNWHIHHATKGGGQMLICTA CCCCCCEEEEEEECCHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCEEEEEEC GEGWYQEEGKEPVSLVPGTVIAIPPEVKHWHGAKKDSWFSHIAAEIPGENTSNEWCEPVT CCCCHHHCCCCCEEECCCEEEEECCCCHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCC DEEYNRLG CCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA