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The map label for this gene is spoIIR [H]

Identifier: 238916127

GI number: 238916127

Start: 188688

End: 189371

Strand: Direct

Name: spoIIR [H]

Synonym: EUBELI_00161

Alternate gene names: 238916127

Gene position: 188688-189371 (Clockwise)

Preceding gene: 238916126

Following gene: 238916128

Centisome position: 8.8

GC content: 37.87

Gene sequence:

>684_bases
ATGGATATAATCCCAGATATGAAGATATATCAGGGGGGTAAATATCATATGAACATTAAAAAGAAACTTGGAATTCTGCT
TATTGTTATAATAGCTGTCAGTGGACTGGTTGGTTATTACAGAGTGTCTTATGCAGGAAATTTAGAGGCAGTTACAGAAG
GCATATCTGAGAGTATTATAAGATTCCATGTGAGGGCCAACAGTGATTCTCAGGAAGACCAGGAGGTTAAGCTTAAGGTT
AAGGAAGCAGTAGTTGATTACATAAGACCGGCTCTTTCAGAGTCAGATTCTCTTTCAGAGTCAAGAACTATATTAGAGGC
AGAAGGTGATAATATCAGAAATGTTGCTATTAAAACCTTGCGGGATAATGGATTTATGGAAGATGTAAGCGTGTATTTTG
AGAAAAGTTATTTTCCGGTTAAATCATACGGTGATGTAACATTTCCAGCAGGATACTATGAGGCTTTCAGGGTTGATATA
GGTGATGCAGAGGGAAAGAACTGGTGGTGTGTGCTGTATCCGCCATTATGTTTTGTAGATGCGGTGTATGGCGTAGTTCC
AGAGGATTCTAAGGAAAAGCTTGCAGGAGTTCTTACAGACGAAGAATATAAGACAGTAACTGACAGGGGCTGTAAAGTCA
GATTTAAATATTTAACATTTATAAATGAACTGCTTGGGTTATAA

Upstream 100 bases:

>100_bases
ATTATCAGACTTCTTAACAAATAATCTTTAGATTACACGGAGGCTGGCTGTATATGCCAGCCTTTGTTAGTTTGTAAATT
CCTGTTTATTATGGAAATAT

Downstream 100 bases:

>100_bases
GCAGTCAGTGGAGGAAAGTCGATTGAATAATAAGGATAAGGTCTTTATTAAGATTAAAGGATTATATACGGGAACAATGG
ACGAGGAAGCCTCGTGTGAA

Product: stage II sporulation protein R

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MDIIPDMKIYQGGKYHMNIKKKLGILLIVIIAVSGLVGYYRVSYAGNLEAVTEGISESIIRFHVRANSDSQEDQEVKLKV
KEAVVDYIRPALSESDSLSESRTILEAEGDNIRNVAIKTLRDNGFMEDVSVYFEKSYFPVKSYGDVTFPAGYYEAFRVDI
GDAEGKNWWCVLYPPLCFVDAVYGVVPEDSKEKLAGVLTDEEYKTVTDRGCKVRFKYLTFINELLGL

Sequences:

>Translated_227_residues
MDIIPDMKIYQGGKYHMNIKKKLGILLIVIIAVSGLVGYYRVSYAGNLEAVTEGISESIIRFHVRANSDSQEDQEVKLKV
KEAVVDYIRPALSESDSLSESRTILEAEGDNIRNVAIKTLRDNGFMEDVSVYFEKSYFPVKSYGDVTFPAGYYEAFRVDI
GDAEGKNWWCVLYPPLCFVDAVYGVVPEDSKEKLAGVLTDEEYKTVTDRGCKVRFKYLTFINELLGL
>Mature_227_residues
MDIIPDMKIYQGGKYHMNIKKKLGILLIVIIAVSGLVGYYRVSYAGNLEAVTEGISESIIRFHVRANSDSQEDQEVKLKV
KEAVVDYIRPALSESDSLSESRTILEAEGDNIRNVAIKTLRDNGFMEDVSVYFEKSYFPVKSYGDVTFPAGYYEAFRVDI
GDAEGKNWWCVLYPPLCFVDAVYGVVPEDSKEKLAGVLTDEEYKTVTDRGCKVRFKYLTFINELLGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014202 [H]

Pfam domain/function: PF09551 Spore_II_R [H]

EC number: NA

Molecular weight: Translated: 25633; Mature: 25633

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIPDMKIYQGGKYHMNIKKKLGILLIVIIAVSGLVGYYRVSYAGNLEAVTEGISESII
CCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHEE
RFHVRANSDSQEDQEVKLKVKEAVVDYIRPALSESDSLSESRTILEAEGDNIRNVAIKTL
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEECCCCCCHHHEEEEE
RDNGFMEDVSVYFEKSYFPVKSYGDVTFPAGYYEAFRVDIGDAEGKNWWCVLYPPLCFVD
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECHHHHHH
AVYGVVPEDSKEKLAGVLTDEEYKTVTDRGCKVRFKYLTFINELLGL
HHHCCCCCCCHHHHHHCCCCCHHHHHHCCCCEEEHHHHHHHHHHHCC
>Mature Secondary Structure
MDIIPDMKIYQGGKYHMNIKKKLGILLIVIIAVSGLVGYYRVSYAGNLEAVTEGISESII
CCCCCCCCEECCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHEE
RFHVRANSDSQEDQEVKLKVKEAVVDYIRPALSESDSLSESRTILEAEGDNIRNVAIKTL
EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCEEEECCCCCCHHHEEEEE
RDNGFMEDVSVYFEKSYFPVKSYGDVTFPAGYYEAFRVDIGDAEGKNWWCVLYPPLCFVD
CCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECHHHHHH
AVYGVVPEDSKEKLAGVLTDEEYKTVTDRGCKVRFKYLTFINELLGL
HHHCCCCCCCHHHHHHCCCCCHHHHHHCCCCEEEHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]