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The map label for this gene is rfbX [H]

Identifier: 238916097

GI number: 238916097

Start: 154387

End: 155844

Strand: Direct

Name: rfbX [H]

Synonym: EUBELI_00131

Alternate gene names: 238916097

Gene position: 154387-155844 (Clockwise)

Preceding gene: 238916096

Following gene: 238916098

Centisome position: 7.2

GC content: 32.03

Gene sequence:

>1458_bases
ATGGGTAAACAAAAGTCATTAAAACTTAATTTTATAATGAATGCAATACTCACCATGTCCAGTTTTTTATTTCCCTTGAT
TACATTTCCGTATGTATCAAGGGTTTTATTACCGGCAGGAACAGGCAGGGTATCATTTGCTAATTCAGTAATTACATATT
TTGTGATGATATCACAGCTTGGTATACCTACATATGGTATAAGAGCATGTGCTGTGGTGAGAGATAACAGGGAAAAACTG
AAAAAGACAGTGAATGAACTGCTTATAATTAACACGGTTATGAGCGTATTTGCATATGTTGTATTTTTTGCAGCGTTATT
CAGTGTACCAAGATTAAGAAGTGATAAGACTCTTTTTGTAGTTATGAGTTTGCTCATATTCTTTAATACAATAGGCGTTG
AATGGCTGTATAAGGCATTGGAGTATTATACATATATAACGGTACGTTCAATAATATTCAAATTTATAGCCTTGATAGCA
ATGTTTGTATTAATTCATGATGTGAATGATTATGTTATTTATGGAGGAATCTCTATATTTGCGGCATCAGCATCGAATGT
ATTTAACTTTATAAGGCTTAGAAAAATCGTTGGAAGTGAAAAAGTTGGCAAACTGGATTTCAAACAACATTTAAAACCAG
TATTTACATTCTTTATAATATCATGTGCTACGACTATATATACTAATCTGGATAATGTCATGCTTGGATTTATGAAGGAT
GATGTAGAAGTTGGATATTATAATGCTGCTACTAAGATAAAGAATATACTGGTAAGTATAGTTACATCCTTAGGAACAGT
TCTTATGCCTAGAGCATCTTATTATATACAGCAGGATATGTGGGATGAATTTTATGCATTGTCCAAGAAGGCAATTAAAT
TTGTATTACTGGCGGCTACCTCAATGATGGTATATTTTATGATATTTGCGAGAGAGGGCGTATTATTTTTGTCAGGAGAT
GCATTTGAGGGTGCAATAATGCCTATGATAATAATAATGCCAACATTATTATTTATTGGACTTACTAATATTATGGGCAT
TCAGATGCTTATCCCTATGGGGCAGGAAAATGCGGTAATGATATCAACATTTGTTGGCGCAATTGTTGATTTAGTTCTTA
ATACCATACTTATACCACAGCTTGGAGCTAATGGTGCAGCTATTGGTACATTAGCAGCAGAGCTTGTAGTTTTGATTGTA
CAGATGGTATACCTGAGAAAAGATATTTCATTCTTGTATGCAAAGCAGAGTTATATTAAAATATTATTGGCGCTGGTTAT
TTCATCAGCGGTTGCTTATATTATAAAAATACTTTCAGTAGGAATATTTATAAAACTTGTTATATCAGCGATAGTTTTCT
TTGGCATATATGTTGTGGCATTATATCTTATGAAAGAAGAAATTGTAAGGGATAATGCAGATAAAGTTATTAAAAAAGTT
TTCAAAAGAAATAAATAA

Upstream 100 bases:

>100_bases
GCTTTTTGTGATAACGATGTTTTTAAGGAAATAAATATATTGAAGTCAATGTCGAAACCAATTTATAAAATAATAGGAAT
GAAGAGAGATAATTAATGTA

Downstream 100 bases:

>100_bases
AAGAAGAAAAGAGGATATTTTTATGTACGATTATTTAGTAGTAGGTTCAGGATTATATGGAGCAATATTTGCACATGAAG
CTAAGAAAGCAGGAAAATCA

Product: polysaccharide transporter

Products: lipopolysaccharide [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 484

Protein sequence:

>485_residues
MGKQKSLKLNFIMNAILTMSSFLFPLITFPYVSRVLLPAGTGRVSFANSVITYFVMISQLGIPTYGIRACAVVRDNREKL
KKTVNELLIINTVMSVFAYVVFFAALFSVPRLRSDKTLFVVMSLLIFFNTIGVEWLYKALEYYTYITVRSIIFKFIALIA
MFVLIHDVNDYVIYGGISIFAASASNVFNFIRLRKIVGSEKVGKLDFKQHLKPVFTFFIISCATTIYTNLDNVMLGFMKD
DVEVGYYNAATKIKNILVSIVTSLGTVLMPRASYYIQQDMWDEFYALSKKAIKFVLLAATSMMVYFMIFAREGVLFLSGD
AFEGAIMPMIIIMPTLLFIGLTNIMGIQMLIPMGQENAVMISTFVGAIVDLVLNTILIPQLGANGAAIGTLAAELVVLIV
QMVYLRKDISFLYAKQSYIKILLALVISSAVAYIIKILSVGIFIKLVISAIVFFGIYVVALYLMKEEIVRDNADKVIKKV
FKRNK

Sequences:

>Translated_485_residues
MGKQKSLKLNFIMNAILTMSSFLFPLITFPYVSRVLLPAGTGRVSFANSVITYFVMISQLGIPTYGIRACAVVRDNREKL
KKTVNELLIINTVMSVFAYVVFFAALFSVPRLRSDKTLFVVMSLLIFFNTIGVEWLYKALEYYTYITVRSIIFKFIALIA
MFVLIHDVNDYVIYGGISIFAASASNVFNFIRLRKIVGSEKVGKLDFKQHLKPVFTFFIISCATTIYTNLDNVMLGFMKD
DVEVGYYNAATKIKNILVSIVTSLGTVLMPRASYYIQQDMWDEFYALSKKAIKFVLLAATSMMVYFMIFAREGVLFLSGD
AFEGAIMPMIIIMPTLLFIGLTNIMGIQMLIPMGQENAVMISTFVGAIVDLVLNTILIPQLGANGAAIGTLAAELVVLIV
QMVYLRKDISFLYAKQSYIKILLALVISSAVAYIIKILSVGIFIKLVISAIVFFGIYVVALYLMKEEIVRDNADKVIKKV
FKRNK
>Mature_484_residues
GKQKSLKLNFIMNAILTMSSFLFPLITFPYVSRVLLPAGTGRVSFANSVITYFVMISQLGIPTYGIRACAVVRDNREKLK
KTVNELLIINTVMSVFAYVVFFAALFSVPRLRSDKTLFVVMSLLIFFNTIGVEWLYKALEYYTYITVRSIIFKFIALIAM
FVLIHDVNDYVIYGGISIFAASASNVFNFIRLRKIVGSEKVGKLDFKQHLKPVFTFFIISCATTIYTNLDNVMLGFMKDD
VEVGYYNAATKIKNILVSIVTSLGTVLMPRASYYIQQDMWDEFYALSKKAIKFVLLAATSMMVYFMIFAREGVLFLSGDA
FEGAIMPMIIIMPTLLFIGLTNIMGIQMLIPMGQENAVMISTFVGAIVDLVLNTILIPQLGANGAAIGTLAAELVVLIVQ
MVYLRKDISFLYAKQSYIKILLALVISSAVAYIIKILSVGIFIKLVISAIVFFGIYVVALYLMKEEIVRDNADKVIKKVF
KRNK

Specific function: May be involved in the translocation process of the nascent O-polysaccharide molecules and/or its ligation to lipid A core units [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788349, Length=411, Percent_Identity=24.0875912408759, Blast_Score=103, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 54407; Mature: 54276

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCCC
>Mature Secondary Structure 
GKQKSLKLNFIMNAILTMSSFLFPLITFPYVSRVLLPAGTGRVSFANSVITYFVMISQL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC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HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: lipopolysaccharide [Cytoplasm] [C]

Specific reaction: lipopolysaccharide [Cytoplasm] = lipopolysaccharide [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7517390; 7517391; 9097040; 9278503 [H]