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The map label for this gene is licC [H]

Identifier: 238916076

GI number: 238916076

Start: 121913

End: 123673

Strand: Direct

Name: licC [H]

Synonym: EUBELI_00109

Alternate gene names: 238916076

Gene position: 121913-123673 (Clockwise)

Preceding gene: 238916075

Following gene: 238916077

Centisome position: 5.69

GC content: 34.92

Gene sequence:

>1761_bases
ATGAGAAAAGAAGAGTTTTATGTATTGAACAGTTTGTATAATGGAAGCATTGGCAGAGCAGGCTGCACTTATGATGTTGA
GGAGACAAAAGCTCTTAATGACACAAATATTTATAATAAACTTGTAAAAACAGGGTATATTGAAAAAGAGTCTGGTAGTC
TTACAAAGACTGGATTAGAGGCACTTGAACCATACAGGGTTAATAATGCCGTTATTCTTGCAGCTGGCGCATCTACACGT
TTTATTCCTTTATCACTTGAACAGCCAAAGGGTCTTTTTGAAGTTAAGGGTGAACGTCTGATTGAGAGACAGATAAAGCA
GCTTCAGGATGCTGGCATTAAGAATATTACAGTTGTACTTGGCTATAAGAAGGAGATGTTTTACTATCTTGAAGACAAGT
ATGGTGTAAAGTTCATTATTAATGATTCATTTAATATAAAGAATAATATAGAAAGTCTTTATCTTGCAAGAAAAGAACTT
AAAAATACTTATATATGCGTAAGTGACAGTTATTATATCGAGAATCCTTTTAATCAGTTTGAATATCATACATTTTATTC
AGGTTATTATGGAAAGGAAACAACAGATGAAGTATATGCAAGAGCTGACGGATTTGGAAAGATAACAAGAATTGCCAAGG
ATAATAAGATTGATGGATATGTTCTTATGGGACATTCATTCTGGAGAAAAGAATTCTCAGAAGCATTTATTAATCAGGTT
GAAGCTGTACGTGAATCTGGGGTTTATAATAACTGCTATTGGGAGATTCTTGTAAAAGATAAGCTGGATGAGCTGCCTGA
TATATTCTTTAAAGAGTATCTTCCAGGTAATATATTCGAGTTTGACTATTTCGATGAGCTTAGAAAGTTTGATTCACAGT
ATCTTGGACATACACATAGTGAGATTATAAGGAATATCAAGCTTGTATTCAGATGTGATGAGGAAGATATAATTGATTTC
AGGAATGTAAGCGAAGGAATGACCAACACATCATTTATATTCAAGATTGACGGAATTGATTATATATACAGACATCCAGG
CGATGGAACAGAAAGTATAATCAATAGAAGAAATGAAAAAAAATCACTTATTAAAGCCAAAGAAGCTGGTGTAGATCCTA
CATACATATATGCAGATGTTAATGAGGGCTGGAAGATATCCATATTCATTCCAGAATTCAGAGAACCTGATTATAATTCT
TTTGAGGACTCAAAGAAGATATTGGCTGTTTTAAGAAAGCTGCATAAGGCAGATATAACAGCCGATTATGGAATGAAACC
TTGGGAAGATGCACTTGATATGGAGAAGCTTCTTGAGAAGAAAGATCCTGTGTGCTTCGTTCAATATGAAGGACTTAAGA
ACAACATAGGACAGTTGTATAAGATGACTCTAGCAGATGGAGTTGAAAAATGTTTCTGTCATGGCGATACATATAAGCCA
AACTGGATGATAAGACCAGATGGAAGTGTTATACTTATTGACTGGGAGTATTCTGGATATTCTGACCCGGGAATTGATGT
TGGATATTATGTGGTTGATGCCATGTATGATTTTGATAAGGCTGAGGAATTCATAAAGGAATACCTTCAGGAAGATTATA
ATGAGACAACAAGATTTCATTATATGGCATATGTTGCTATTATTGCGTACTACTGGTTTGTATGGGCTATGTACAGGGAA
TCATGTGGTGCAGACATGGGAGAGGCATTGGAGAACTGGCGAGACATGGCAGTTAAATATGCTGAGTACCTTTTGAAATA
A

Upstream 100 bases:

>100_bases
ATACTTTCAGGAAAGAAGTATGAATTATGCAGAGAAAATGTAATCAAAGCAGTGATTCGAGGAGTGTTCTCAGGAAACAT
GGCATAAGGAGATATGTATA

Downstream 100 bases:

>100_bases
ATAATATTAAAAGGACACTGTATTATGTAAGAACAGTGTCCTTTTTTGTGTGCAAAACATGTAAAATTTATATTGGATAT
GTAAAAAAAGTATATCGGAT

Product: choline kinase / choline-phosphate cytidylyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MRKEEFYVLNSLYNGSIGRAGCTYDVEETKALNDTNIYNKLVKTGYIEKESGSLTKTGLEALEPYRVNNAVILAAGASTR
FIPLSLEQPKGLFEVKGERLIERQIKQLQDAGIKNITVVLGYKKEMFYYLEDKYGVKFIINDSFNIKNNIESLYLARKEL
KNTYICVSDSYYIENPFNQFEYHTFYSGYYGKETTDEVYARADGFGKITRIAKDNKIDGYVLMGHSFWRKEFSEAFINQV
EAVRESGVYNNCYWEILVKDKLDELPDIFFKEYLPGNIFEFDYFDELRKFDSQYLGHTHSEIIRNIKLVFRCDEEDIIDF
RNVSEGMTNTSFIFKIDGIDYIYRHPGDGTESIINRRNEKKSLIKAKEAGVDPTYIYADVNEGWKISIFIPEFREPDYNS
FEDSKKILAVLRKLHKADITADYGMKPWEDALDMEKLLEKKDPVCFVQYEGLKNNIGQLYKMTLADGVEKCFCHGDTYKP
NWMIRPDGSVILIDWEYSGYSDPGIDVGYYVVDAMYDFDKAEEFIKEYLQEDYNETTRFHYMAYVAIIAYYWFVWAMYRE
SCGADMGEALENWRDMAVKYAEYLLK

Sequences:

>Translated_586_residues
MRKEEFYVLNSLYNGSIGRAGCTYDVEETKALNDTNIYNKLVKTGYIEKESGSLTKTGLEALEPYRVNNAVILAAGASTR
FIPLSLEQPKGLFEVKGERLIERQIKQLQDAGIKNITVVLGYKKEMFYYLEDKYGVKFIINDSFNIKNNIESLYLARKEL
KNTYICVSDSYYIENPFNQFEYHTFYSGYYGKETTDEVYARADGFGKITRIAKDNKIDGYVLMGHSFWRKEFSEAFINQV
EAVRESGVYNNCYWEILVKDKLDELPDIFFKEYLPGNIFEFDYFDELRKFDSQYLGHTHSEIIRNIKLVFRCDEEDIIDF
RNVSEGMTNTSFIFKIDGIDYIYRHPGDGTESIINRRNEKKSLIKAKEAGVDPTYIYADVNEGWKISIFIPEFREPDYNS
FEDSKKILAVLRKLHKADITADYGMKPWEDALDMEKLLEKKDPVCFVQYEGLKNNIGQLYKMTLADGVEKCFCHGDTYKP
NWMIRPDGSVILIDWEYSGYSDPGIDVGYYVVDAMYDFDKAEEFIKEYLQEDYNETTRFHYMAYVAIIAYYWFVWAMYRE
SCGADMGEALENWRDMAVKYAEYLLK
>Mature_586_residues
MRKEEFYVLNSLYNGSIGRAGCTYDVEETKALNDTNIYNKLVKTGYIEKESGSLTKTGLEALEPYRVNNAVILAAGASTR
FIPLSLEQPKGLFEVKGERLIERQIKQLQDAGIKNITVVLGYKKEMFYYLEDKYGVKFIINDSFNIKNNIESLYLARKEL
KNTYICVSDSYYIENPFNQFEYHTFYSGYYGKETTDEVYARADGFGKITRIAKDNKIDGYVLMGHSFWRKEFSEAFINQV
EAVRESGVYNNCYWEILVKDKLDELPDIFFKEYLPGNIFEFDYFDELRKFDSQYLGHTHSEIIRNIKLVFRCDEEDIIDF
RNVSEGMTNTSFIFKIDGIDYIYRHPGDGTESIINRRNEKKSLIKAKEAGVDPTYIYADVNEGWKISIFIPEFREPDYNS
FEDSKKILAVLRKLHKADITADYGMKPWEDALDMEKLLEKKDPVCFVQYEGLKNNIGQLYKMTLADGVEKCFCHGDTYKP
NWMIRPDGSVILIDWEYSGYSDPGIDVGYYVVDAMYDFDKAEEFIKEYLQEDYNETTRFHYMAYVAIIAYYWFVWAMYRE
SCGADMGEALENWRDMAVKYAEYLLK

Specific function: Unknown

COG id: COG4750

COG function: function code M; CTP:phosphocholine cytidylyltransferase involved in choline phosphorylation for cell surface LPS epitopes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017189
- InterPro:   IPR005835 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: NA

Molecular weight: Translated: 68596; Mature: 68596

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKEEFYVLNSLYNGSIGRAGCTYDVEETKALNDTNIYNKLVKTGYIEKESGSLTKTGLE
CCCCCEEEEEHHCCCCCCCCCCEECHHHHHCCCCHHHHHHHHHHCCEECCCCCCCHHHHH
ALEPYRVNNAVILAAGASTRFIPLSLEQPKGLFEVKGERLIERQIKQLQDAGIKNITVVL
HHCCEECCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GYKKEMFYYLEDKYGVKFIINDSFNIKNNIESLYLARKELKNTYICVSDSYYIENPFNQF
EECHHEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCC
EYHTFYSGYYGKETTDEVYARADGFGKITRIAKDNKIDGYVLMGHSFWRKEFSEAFINQV
EEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHH
EAVRESGVYNNCYWEILVKDKLDELPDIFFKEYLPGNIFEFDYFDELRKFDSQYLGHTHS
HHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHH
EIIRNIKLVFRCDEEDIIDFRNVSEGMTNTSFIFKIDGIDYIYRHPGDGTESIINRRNEK
HHHHCEEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCHHHHHHCCCHH
KSLIKAKEAGVDPTYIYADVNEGWKISIFIPEFREPDYNSFEDSKKILAVLRKLHKADIT
HHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
ADYGMKPWEDALDMEKLLEKKDPVCFVQYEGLKNNIGQLYKMTLADGVEKCFCHGDTYKP
CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
NWMIRPDGSVILIDWEYSGYSDPGIDVGYYVVDAMYDFDKAEEFIKEYLQEDYNETTRFH
CEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
YMAYVAIIAYYWFVWAMYRESCGADMGEALENWRDMAVKYAEYLLK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRKEEFYVLNSLYNGSIGRAGCTYDVEETKALNDTNIYNKLVKTGYIEKESGSLTKTGLE
CCCCCEEEEEHHCCCCCCCCCCEECHHHHHCCCCHHHHHHHHHHCCEECCCCCCCHHHHH
ALEPYRVNNAVILAAGASTRFIPLSLEQPKGLFEVKGERLIERQIKQLQDAGIKNITVVL
HHCCEECCCEEEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
GYKKEMFYYLEDKYGVKFIINDSFNIKNNIESLYLARKELKNTYICVSDSYYIENPFNQF
EECHHEEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCEEECCCCCCC
EYHTFYSGYYGKETTDEVYARADGFGKITRIAKDNKIDGYVLMGHSFWRKEFSEAFINQV
EEEEEECCCCCCCCHHHHHHHCCCCHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHH
EAVRESGVYNNCYWEILVKDKLDELPDIFFKEYLPGNIFEFDYFDELRKFDSQYLGHTHS
HHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCHH
EIIRNIKLVFRCDEEDIIDFRNVSEGMTNTSFIFKIDGIDYIYRHPGDGTESIINRRNEK
HHHHCEEEEEEECCHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCCCCHHHHHHCCCHH
KSLIKAKEAGVDPTYIYADVNEGWKISIFIPEFREPDYNSFEDSKKILAVLRKLHKADIT
HHHHHHHHCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCC
ADYGMKPWEDALDMEKLLEKKDPVCFVQYEGLKNNIGQLYKMTLADGVEKCFCHGDTYKP
CCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
NWMIRPDGSVILIDWEYSGYSDPGIDVGYYVVDAMYDFDKAEEFIKEYLQEDYNETTRFH
CEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
YMAYVAIIAYYWFVWAMYRESCGADMGEALENWRDMAVKYAEYLLK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800 [H]