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The map label for this gene is licD [H]

Identifier: 238916068

GI number: 238916068

Start: 112266

End: 113150

Strand: Direct

Name: licD [H]

Synonym: EUBELI_00101

Alternate gene names: 238916068

Gene position: 112266-113150 (Clockwise)

Preceding gene: 238916067

Following gene: 238916069

Centisome position: 5.24

GC content: 34.92

Gene sequence:

>885_bases
ATGAGCCAGAATGAACAGTATGATCCAAAGGTTTTGAGAAAGTTACAGCTTGCAGAATTAGAGGTGTTTAAAGATTTTAT
TAAAATATGTGATGAGAACGGACTTTCATATTTCCTGTTTGCAGGATGTGCAATCGGAGTTGAGAGACATAAAGGATTTA
TTCCATGGGATGATGATATAGATATCGGAATGCTCAGAGATGATTATGAGAAGGTTCTGAAGATATATAGAGAGAAATAT
ACAGATAAGTATGTAGTTCTTGATATAGATTCACAGGAAACATTTCCTTTCTATAATGCAGAGATAGCAAGAATTGGAAC
TAAGAATATACCATATGTATTCAAGGATGCTAATGTTCCTATGGGAATTGATATTGCGCTTTATCCTTATGATAATGTTC
CTGATGATGCCAAGAAGAGAAGAAGACAGAGATCATCAGTATTCTTCTGGAGCAAGTTAAGAATATTAAGAGAATTCAAG
AAACCTGTGCTTTTCATGCATGGATGGAAGAGAAAAGTTGTAAGTGCAATGTGTATAGTAATGAACAGATTACTTACATG
GACACATTTCTCAAGAAAATTCATCAACAGACGTTATATGAAGAGCGCACTTAAGTATAACAATGAGAAGACAAGATGGG
TTGCATGTTTCTTTGGTGAGATGGATCCTTTAAAGCAGGCTATAAAGTTAGATGACCTGTTCCCATTGGTTGAAAAGCCA
TTTGAAGATATAATGGTTAAAGTCCCTAAGAATAATGATGTATTTCTTAAGAGAATGTTTGGCGATTATATGAAGATGCC
ACCAGTAGAGAGCAGAAAGAATCATGTACCTGAGGTTCTGGAGTTCGGACCATTTGATGAGGAACTGAAAGATATTGATA
TTTAA

Upstream 100 bases:

>100_bases
TTAACGGAGCTGCACTCGGCTATCTGATACTTGTTGTGTTATTAGGCGTATTATTGATGGGATATATCTTATACCAGATT
AGAAAGGATAGAAAAAGACA

Downstream 100 bases:

>100_bases
AGCATGGACAATTATGGAGAAAATATGAAAAAACTTATAATAATTCCAGCATATAACGAGAGCGAAAGTATAGAGAAGAC
AGTCAGAGATATTATAGAGA

Product: lipopolysaccharide cholinephosphotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MSQNEQYDPKVLRKLQLAELEVFKDFIKICDENGLSYFLFAGCAIGVERHKGFIPWDDDIDIGMLRDDYEKVLKIYREKY
TDKYVVLDIDSQETFPFYNAEIARIGTKNIPYVFKDANVPMGIDIALYPYDNVPDDAKKRRRQRSSVFFWSKLRILREFK
KPVLFMHGWKRKVVSAMCIVMNRLLTWTHFSRKFINRRYMKSALKYNNEKTRWVACFFGEMDPLKQAIKLDDLFPLVEKP
FEDIMVKVPKNNDVFLKRMFGDYMKMPPVESRKNHVPEVLEFGPFDEELKDIDI

Sequences:

>Translated_294_residues
MSQNEQYDPKVLRKLQLAELEVFKDFIKICDENGLSYFLFAGCAIGVERHKGFIPWDDDIDIGMLRDDYEKVLKIYREKY
TDKYVVLDIDSQETFPFYNAEIARIGTKNIPYVFKDANVPMGIDIALYPYDNVPDDAKKRRRQRSSVFFWSKLRILREFK
KPVLFMHGWKRKVVSAMCIVMNRLLTWTHFSRKFINRRYMKSALKYNNEKTRWVACFFGEMDPLKQAIKLDDLFPLVEKP
FEDIMVKVPKNNDVFLKRMFGDYMKMPPVESRKNHVPEVLEFGPFDEELKDIDI
>Mature_293_residues
SQNEQYDPKVLRKLQLAELEVFKDFIKICDENGLSYFLFAGCAIGVERHKGFIPWDDDIDIGMLRDDYEKVLKIYREKYT
DKYVVLDIDSQETFPFYNAEIARIGTKNIPYVFKDANVPMGIDIALYPYDNVPDDAKKRRRQRSSVFFWSKLRILREFKK
PVLFMHGWKRKVVSAMCIVMNRLLTWTHFSRKFINRRYMKSALKYNNEKTRWVACFFGEMDPLKQAIKLDDLFPLVEKPF
EDIMVKVPKNNDVFLKRMFGDYMKMPPVESRKNHVPEVLEFGPFDEELKDIDI

Specific function: Transfers phosphorylcholine (ChoP) from choline diphosphonucleoside to the lipopolysaccharide (LPS) [H]

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the licD transferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007074 [H]

Pfam domain/function: PF04991 LicD [H]

EC number: NA

Molecular weight: Translated: 35041; Mature: 34910

Theoretical pI: Translated: 8.96; Mature: 8.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNEQYDPKVLRKLQLAELEVFKDFIKICDENGLSYFLFAGCAIGVERHKGFIPWDDDI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCCC
DIGMLRDDYEKVLKIYREKYTDKYVVLDIDSQETFPFYNAEIARIGTKNIPYVFKDANVP
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEECCCCCCCEEEECCCCC
MGIDIALYPYDNVPDDAKKRRRQRSSVFFWSKLRILREFKKPVLFMHGWKRKVVSAMCIV
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHH
MNRLLTWTHFSRKFINRRYMKSALKYNNEKTRWVACFFGEMDPLKQAIKLDDLFPLVEKP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC
FEDIMVKVPKNNDVFLKRMFGDYMKMPPVESRKNHVPEVLEFGPFDEELKDIDI
HHHHEEECCCCCCHHHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCCHHHHCCCC
>Mature Secondary Structure 
SQNEQYDPKVLRKLQLAELEVFKDFIKICDENGLSYFLFAGCAIGVERHKGFIPWDDDI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCCCCCC
DIGMLRDDYEKVLKIYREKYTDKYVVLDIDSQETFPFYNAEIARIGTKNIPYVFKDANVP
CCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHEECCCCCCCEEEECCCCC
MGIDIALYPYDNVPDDAKKRRRQRSSVFFWSKLRILREFKKPVLFMHGWKRKVVSAMCIV
CCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHH
MNRLLTWTHFSRKFINRRYMKSALKYNNEKTRWVACFFGEMDPLKQAIKLDDLFPLVEKP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCC
FEDIMVKVPKNNDVFLKRMFGDYMKMPPVESRKNHVPEVLEFGPFDEELKDIDI
HHHHEEECCCCCCHHHHHHHHHHHCCCCCCCHHCCCCHHHHCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2479481; 7542800; 10632893 [H]