| Definition | Eubacterium eligens ATCC 27750 chromosome, complete genome. |
|---|---|
| Accession | NC_012778 |
| Length | 2,144,190 |
Click here to switch to the map view.
The map label for this gene is 238916057
Identifier: 238916057
GI number: 238916057
Start: 97495
End: 98787
Strand: Direct
Name: 238916057
Synonym: EUBELI_00090
Alternate gene names: NA
Gene position: 97495-98787 (Clockwise)
Preceding gene: 238916056
Following gene: 238916058
Centisome position: 4.55
GC content: 39.83
Gene sequence:
>1293_bases ATGGGTTTATCAAAATTTTTTCTTAATACGGGAGAAGCATTGAGACCGGTGCTGACAAAGATTATTCCTATGAAGCTTTT AAGTAAGATGAAAGCAGGGATAATTAATAATGCCACAGACAAGCTGTCGGCTGATTCTATTGAAAAATATGAGGCAGGAA GATACAAATGTGGTGCCAATATAATAGGTAATATTAAGGGCGATAACGGACTTGGACAAAGCGCAAGAATTATGTGCAGG CTGCTTGATGAGAATAAAGAACCTCATGTTATAAGGGATTTCTTTGTTCCACCAGGAGGTTCAAGAAGCAATGATACGTA TGATGACAGATTCACAGAGGAGCTTCCTTTTGATGTGAATATTATTCATGTTAATGCAAGTGAATTCATGGTAGCATATT TAAGCCTTGGAAAAGAAGTATGGGATTACAGATATAACATAGGATACTGGGCATGGGAGCTGGAGACATTTCCAGAAGAG TGGCTTCCGGCATTCAAGCTTGTTGATGAAGTCTGGACACCGTCTGATTTTGTTACGAATACTTTGAAGAAATACACAGA CAAGCCTGTAATAACAGTTCCGCACTGTGTTGCACCGCAGACGGATACTGTGAAGTTTGATAGAAAGCATTTTAATCTTC CAGAAGATAAGTTCTTATTCCTTGTAATGTATAACAGTGGAAGCGTTATGGAAAGAAAGAATCCGCTTGCCGCTATTAAA GCATTTAAAGAAGCGTTCTGCAAAGATGAACAGATGAAAGAAAAATACAAGGATGTCGGACTTGTTATCAAGATAAGCGA GGCAGAATTATCTGCAGAAGATGAAAAGATTATTGGTTCTGTAATAGAGGACTGCGATAACATTTATTATATGTGCGGTC ATATGGGAAGATGTGAGGTTAATACACTTCTTGCAGATGTGGATGTGTATGTTTCGCTCCACCGTTCAGAAGGCTTCGGA CTTGTTATGGCTGAGTCAATGTATGTTGGTACACCTGTTATTGCAACTGACTGGTCGGGCAATACAGAGTTTATGAACAG TGATACAGCATGCATGGTCGGTTACGACATGATAGAGCTTGATAAGGACTATGAGCCGTTCAAGAAGGGCAATGTATGGG CTGATGCACATGTTGATGAGGCAGCAGACTATATGAGAAGGCTTTATGAGGATAAGGATTTCTACGAAAGAATTGCTGGG AATGGTCAGAAATATGCAAGGGAACATCTGGCGTATAAGCGTTCTGCGGATATTGTCAGCGAGAGGTTAAAGAAAATTCA TGGAGAGAATTGA
Upstream 100 bases:
>100_bases CAGACATGCGTTGGACAAGTATACACCGGAAAGACTTGGTGGTATGGTGAGAGACTTTATTAACAGCCAGATGAATAACA GATAGAATGTTGAGGTTTAT
Downstream 100 bases:
>100_bases TTGACAGGGAAATGAATGCGTAATATTATCAGTAATCGATATTTTGTAAAAAGATGATATATAGAAGGTAGTTATGAAAA AATTTAAACCAATAATAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Mannosyltransferase; Glycosyltransferase Protein; Glycosyl Transferase Family Protein; Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; LpsE Protein; Glycosyl Transferase Group 1 Protein; FkbM Family Methyltransferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MGLSKFFLNTGEALRPVLTKIIPMKLLSKMKAGIINNATDKLSADSIEKYEAGRYKCGANIIGNIKGDNGLGQSARIMCR LLDENKEPHVIRDFFVPPGGSRSNDTYDDRFTEELPFDVNIIHVNASEFMVAYLSLGKEVWDYRYNIGYWAWELETFPEE WLPAFKLVDEVWTPSDFVTNTLKKYTDKPVITVPHCVAPQTDTVKFDRKHFNLPEDKFLFLVMYNSGSVMERKNPLAAIK AFKEAFCKDEQMKEKYKDVGLVIKISEAELSAEDEKIIGSVIEDCDNIYYMCGHMGRCEVNTLLADVDVYVSLHRSEGFG LVMAESMYVGTPVIATDWSGNTEFMNSDTACMVGYDMIELDKDYEPFKKGNVWADAHVDEAADYMRRLYEDKDFYERIAG NGQKYAREHLAYKRSADIVSERLKKIHGEN
Sequences:
>Translated_430_residues MGLSKFFLNTGEALRPVLTKIIPMKLLSKMKAGIINNATDKLSADSIEKYEAGRYKCGANIIGNIKGDNGLGQSARIMCR LLDENKEPHVIRDFFVPPGGSRSNDTYDDRFTEELPFDVNIIHVNASEFMVAYLSLGKEVWDYRYNIGYWAWELETFPEE WLPAFKLVDEVWTPSDFVTNTLKKYTDKPVITVPHCVAPQTDTVKFDRKHFNLPEDKFLFLVMYNSGSVMERKNPLAAIK AFKEAFCKDEQMKEKYKDVGLVIKISEAELSAEDEKIIGSVIEDCDNIYYMCGHMGRCEVNTLLADVDVYVSLHRSEGFG LVMAESMYVGTPVIATDWSGNTEFMNSDTACMVGYDMIELDKDYEPFKKGNVWADAHVDEAADYMRRLYEDKDFYERIAG NGQKYAREHLAYKRSADIVSERLKKIHGEN >Mature_429_residues GLSKFFLNTGEALRPVLTKIIPMKLLSKMKAGIINNATDKLSADSIEKYEAGRYKCGANIIGNIKGDNGLGQSARIMCRL LDENKEPHVIRDFFVPPGGSRSNDTYDDRFTEELPFDVNIIHVNASEFMVAYLSLGKEVWDYRYNIGYWAWELETFPEEW LPAFKLVDEVWTPSDFVTNTLKKYTDKPVITVPHCVAPQTDTVKFDRKHFNLPEDKFLFLVMYNSGSVMERKNPLAAIKA FKEAFCKDEQMKEKYKDVGLVIKISEAELSAEDEKIIGSVIEDCDNIYYMCGHMGRCEVNTLLADVDVYVSLHRSEGFGL VMAESMYVGTPVIATDWSGNTEFMNSDTACMVGYDMIELDKDYEPFKKGNVWADAHVDEAADYMRRLYEDKDFYERIAGN GQKYAREHLAYKRSADIVSERLKKIHGEN
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49118; Mature: 48987
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSKFFLNTGEALRPVLTKIIPMKLLSKMKAGIINNATDKLSADSIEKYEAGRYKCGAN CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCEEECCC IIGNIKGDNGLGQSARIMCRLLDENKEPHVIRDFFVPPGGSRSNDTYDDRFTEELPFDVN EEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEE IIHVNASEFMVAYLSLGKEVWDYRYNIGYWAWELETFPEEWLPAFKLVDEVWTPSDFVTN EEEECHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHH TLKKYTDKPVITVPHCVAPQTDTVKFDRKHFNLPEDKFLFLVMYNSGSVMERKNPLAAIK HHHHHCCCCEEECCCCCCCCCCCEEECHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHH AFKEAFCKDEQMKEKYKDVGLVIKISEAELSAEDEKIIGSVIEDCDNIYYMCGHMGRCEV HHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEHHCCCCCCCH NTLLADVDVYVSLHRSEGFGLVMAESMYVGTPVIATDWSGNTEFMNSDTACMVGYDMIEL HHHHHHEEEEEEEECCCCCEEEEECCEEECCCEEEECCCCCCCCCCCCCEEEEECHHEEC DKDYEPFKKGNVWADAHVDEAADYMRRLYEDKDFYERIAGNGQKYAREHLAYKRSADIVS CCCCCCHHCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ERLKKIHGEN HHHHHHCCCC >Mature Secondary Structure GLSKFFLNTGEALRPVLTKIIPMKLLSKMKAGIINNATDKLSADSIEKYEAGRYKCGAN CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCCCEEECCC IIGNIKGDNGLGQSARIMCRLLDENKEPHVIRDFFVPPGGSRSNDTYDDRFTEELPFDVN EEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHCCCCEEE IIHVNASEFMVAYLSLGKEVWDYRYNIGYWAWELETFPEEWLPAFKLVDEVWTPSDFVTN EEEECHHHHHHHHHHHHHHHHHEEEECCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHH TLKKYTDKPVITVPHCVAPQTDTVKFDRKHFNLPEDKFLFLVMYNSGSVMERKNPLAAIK HHHHHCCCCEEECCCCCCCCCCCEEECHHHCCCCCCCEEEEEEECCCCCCCCCCHHHHHH AFKEAFCKDEQMKEKYKDVGLVIKISEAELSAEDEKIIGSVIEDCDNIYYMCGHMGRCEV HHHHHHCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEHHCCCCCCCH NTLLADVDVYVSLHRSEGFGLVMAESMYVGTPVIATDWSGNTEFMNSDTACMVGYDMIEL HHHHHHEEEEEEEECCCCCEEEEECCEEECCCEEEECCCCCCCCCCCCCEEEEECHHEEC DKDYEPFKKGNVWADAHVDEAADYMRRLYEDKDFYERIAGNGQKYAREHLAYKRSADIVS CCCCCCHHCCCEEECCCHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH ERLKKIHGEN HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA