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The map label for this gene is yiaG [C]

Identifier: 238897173

GI number: 238897173

Start: 5172734

End: 5173057

Strand: Direct

Name: yiaG [C]

Synonym: KP1_5440

Alternate gene names: 238897173

Gene position: 5172734-5173057 (Clockwise)

Preceding gene: 238897172

Following gene: 238897182

Centisome position: 98.56

GC content: 47.22

Gene sequence:

>324_bases
ATGACAGCAAAAAATAAATACAAAAGCCCGGCTTTCGAAGCGATCCATAGCGCTGCGTCGGGGCTATTCAGCGTTGGCGC
AATCCCACAGGAAACAATGCGCCATTTTGATGAATCATGTCTCGGTAGCGTAGCCGCACTTCAACCCATTGAAATTAAAG
CGCTACGTGAACAACTCAATGTTAGCCAACCCGTGTTCGCTCGTTATCTGAATACCAGTGTGTCTACCGTGCAAAAATGG
GAGACTGGCGCTAAACGACCGAGCGGAATGTCATTAAAATTGCTTAGCGTCGTACAAAAACACGGCCTGAAAATCCTACT
GTAG

Upstream 100 bases:

>100_bases
GAATTAATGGGGTTTCGTGAGTTAGCAAAACACTATGCCAATCTCTCTGAAGAGAAAACGACGGCCTTAGTTAAAAGTAA
AGAATTAGTGGAGATTTGCG

Downstream 100 bases:

>100_bases
TTATCCTGCCGGATGGCGCTTACGCTTATCCGGCCTGCAAGTGACGAGTGAGGAAACCGTAGGCCGGATAAGGCGCAGCC
GCCATCCGGCACACAAAAGC

Product: putative helix-turn-helix protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; Cro/CI Family Transcriptional Regulator-Related Protein; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein; Transcriptional Regulator-Like Protein; Transcriptional Regulator-Like; Helix-Turn-Helix Family Protein; Helix-Turn-Helix Protein; Transcriptional Regulator Protein; HTH-Type Transcriptional Regulatory Protein

Number of amino acids: Translated: 107; Mature: 106

Protein sequence:

>107_residues
MTAKNKYKSPAFEAIHSAASGLFSVGAIPQETMRHFDESCLGSVAALQPIEIKALREQLNVSQPVFARYLNTSVSTVQKW
ETGAKRPSGMSLKLLSVVQKHGLKILL

Sequences:

>Translated_107_residues
MTAKNKYKSPAFEAIHSAASGLFSVGAIPQETMRHFDESCLGSVAALQPIEIKALREQLNVSQPVFARYLNTSVSTVQKW
ETGAKRPSGMSLKLLSVVQKHGLKILL
>Mature_106_residues
TAKNKYKSPAFEAIHSAASGLFSVGAIPQETMRHFDESCLGSVAALQPIEIKALREQLNVSQPVFARYLNTSVSTVQKWE
TGAKRPSGMSLKLLSVVQKHGLKILL

Specific function: Unknown

COG id: COG2944

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11684; Mature: 11553

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAKNKYKSPAFEAIHSAASGLFSVGAIPQETMRHFDESCLGSVAALQPIEIKALREQLN
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
VSQPVFARYLNTSVSTVQKWETGAKRPSGMSLKLLSVVQKHGLKILL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEECC
>Mature Secondary Structure 
TAKNKYKSPAFEAIHSAASGLFSVGAIPQETMRHFDESCLGSVAALQPIEIKALREQLN
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
VSQPVFARYLNTSVSTVQKWETGAKRPSGMSLKLLSVVQKHGLKILL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA