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The map label for this gene is cdh [H]

Identifier: 238897109

GI number: 238897109

Start: 5103653

End: 5104417

Strand: Reverse

Name: cdh [H]

Synonym: KP1_5364

Alternate gene names: 238897109

Gene position: 5104417-5103653 (Counterclockwise)

Preceding gene: 238897110

Following gene: 238897108

Centisome position: 97.25

GC content: 61.7

Gene sequence:

>765_bases
ATGAGAAGAGTAAGATACTTTTTGCTGGCGCTGCTGGTGGCGATCCTCGCGGCGCTGGCGGGCGGCTACTACTGGCTGCA
CTCTGGCAACCCGGACGCATTACGCAAGATTGTCCTGCAGCAGTGCGTACCCCATCAGCAACAGCAGCAAAACCCGTCGC
CGTGCGCGGAAGTGAACCTCAAGGGCGGCTATGTGCTGTTTAAAGACCGTAACGGCCCGCTGCAGTATTTGCTGATGCCG
ACCTACCGCATCAACGGCACCGAAAGCCCGCTGCTGCTGGATCCGTTGACGCCGAACTTTTTCTGGCAGGCCTGGCAGGG
GCGTGAAATCATGAGCCAGCGCCACGGCGCGCCGGTTCCTGATAACGCGGTATCGCTGGCGATCAACTCGCGCAGTGGAC
GTACGCAAAACCATTTCCATATTCATATCTCCTGCCTGCGCCCCGATGTGCGCGCGCAGTTAGATAAGGATGCCGCAGCG
ATCAGCAGCCGCTGGCTGCCGCTACCGGGCGGGCTTCAGGGCCACGAATACCTGGCGCGCCGGGTGACGGAGGCGGAGCT
GGCCCAGCGTAGCCCGTTCCTGATGCTGGCGGAAGAGGTGCCGGAGGCGCGTGAACATATGGGACGCTTCGCGCTGGCAA
TGGCGCAACAGAGCGACGGCTCGCTGGTGCTGCTGGCGACGGAGCGTAACCTGCTGACCCTGAACCGGGCTTCAGCGGAA
GAAATTCAGGATCATCGCTGCGCCATCCTTAACGCAAACCACTAG

Upstream 100 bases:

>100_bases
GCGTCAGCCGCTACCCGGGATAACGCCCCGTCCACCATCTGTTTTCATTTAGTCATCAAATTACGCTACTCTTCCGCTTC
AGGCTTAACAGGGAATGAAA

Downstream 100 bases:

>100_bases
TTCTGGCGTTTACCTGTCTTACCTGTCGTCGTATTCTTGCTGAAAAAAACGACAGGAGACAGGCATGTCGCTCTGGCTTA
CCCACCCGCTGTTCCTTCCT

Product: CDP-diacylglycerol pyrophosphatase

Products: NA

Alternate protein names: CDP-diacylglycerol phosphatidylhydrolase; CDP-diglyceride hydrolase [H]

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MRRVRYFLLALLVAILAALAGGYYWLHSGNPDALRKIVLQQCVPHQQQQQNPSPCAEVNLKGGYVLFKDRNGPLQYLLMP
TYRINGTESPLLLDPLTPNFFWQAWQGREIMSQRHGAPVPDNAVSLAINSRSGRTQNHFHIHISCLRPDVRAQLDKDAAA
ISSRWLPLPGGLQGHEYLARRVTEAELAQRSPFLMLAEEVPEAREHMGRFALAMAQQSDGSLVLLATERNLLTLNRASAE
EIQDHRCAILNANH

Sequences:

>Translated_254_residues
MRRVRYFLLALLVAILAALAGGYYWLHSGNPDALRKIVLQQCVPHQQQQQNPSPCAEVNLKGGYVLFKDRNGPLQYLLMP
TYRINGTESPLLLDPLTPNFFWQAWQGREIMSQRHGAPVPDNAVSLAINSRSGRTQNHFHIHISCLRPDVRAQLDKDAAA
ISSRWLPLPGGLQGHEYLARRVTEAELAQRSPFLMLAEEVPEAREHMGRFALAMAQQSDGSLVLLATERNLLTLNRASAE
EIQDHRCAILNANH
>Mature_254_residues
MRRVRYFLLALLVAILAALAGGYYWLHSGNPDALRKIVLQQCVPHQQQQQNPSPCAEVNLKGGYVLFKDRNGPLQYLLMP
TYRINGTESPLLLDPLTPNFFWQAWQGREIMSQRHGAPVPDNAVSLAINSRSGRTQNHFHIHISCLRPDVRAQLDKDAAA
ISSRWLPLPGGLQGHEYLARRVTEAELAQRSPFLMLAEEVPEAREHMGRFALAMAQQSDGSLVLLATERNLLTLNRASAE
EIQDHRCAILNANH

Specific function: Phospholipid biosynthesis. [C]

COG id: COG2134

COG function: function code I; CDP-diacylglycerol pyrophosphatase

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cdh family [H]

Homologues:

Organism=Escherichia coli, GI1790352, Length=244, Percent_Identity=75, Blast_Score=389, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003763
- InterPro:   IPR015993 [H]

Pfam domain/function: PF02611 CDH [H]

EC number: =3.6.1.26 [H]

Molecular weight: Translated: 28525; Mature: 28525

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVRYFLLALLVAILAALAGGYYWLHSGNPDALRKIVLQQCVPHQQQQQNPSPCAEVNL
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEC
KGGYVLFKDRNGPLQYLLMPTYRINGTESPLLLDPLTPNFFWQAWQGREIMSQRHGAPVP
CCCEEEEECCCCCEEEEEEEEEEECCCCCCEEECCCCCCHHHCCCCCHHHHHHCCCCCCC
DNAVSLAINSRSGRTQNHFHIHISCLRPDVRAQLDKDAAAISSRWLPLPGGLQGHEYLAR
CCCEEEEEECCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
RVTEAELAQRSPFLMLAEEVPEAREHMGRFALAMAQQSDGSLVLLATERNLLTLNRASAE
HHHHHHHHHCCCEEEEHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCHH
EIQDHRCAILNANH
HHHCCCEEEEECCC
>Mature Secondary Structure
MRRVRYFLLALLVAILAALAGGYYWLHSGNPDALRKIVLQQCVPHQQQQQNPSPCAEVNL
CCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCHHHHCCCCCCCEEEC
KGGYVLFKDRNGPLQYLLMPTYRINGTESPLLLDPLTPNFFWQAWQGREIMSQRHGAPVP
CCCEEEEECCCCCEEEEEEEEEEECCCCCCEEECCCCCCHHHCCCCCHHHHHHCCCCCCC
DNAVSLAINSRSGRTQNHFHIHISCLRPDVRAQLDKDAAAISSRWLPLPGGLQGHEYLAR
CCCEEEEEECCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
RVTEAELAQRSPFLMLAEEVPEAREHMGRFALAMAQQSDGSLVLLATERNLLTLNRASAE
HHHHHHHHHCCCEEEEHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCEEEEECCCHH
EIQDHRCAILNANH
HHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA