Click here to switch to the map view.

The map label for this gene is waaU [H]

Identifier: 238897067

GI number: 238897067

Start: 5063173

End: 5064252

Strand: Reverse

Name: waaU [H]

Synonym: KP1_5318

Alternate gene names: 238897067

Gene position: 5064252-5063173 (Counterclockwise)

Preceding gene: 238897068

Following gene: 238897061

Centisome position: 96.49

GC content: 52.5

Gene sequence:

>1080_bases
ATGCGTATCCTTAAACAATTAACGCGGAAAAAGAATGCTTTTTTCCGCGGCATTAAATTTAATTTAATTAACTATCGATA
CAGAAATAAGCCGGCGCGTAAAGCCTTCGACCCAGCGGCTGTGCGCCGCGTGCTGCTATTGCGTCTGGATGATAAAGTCG
GTGATATGGTGGTCACGACCGGCTGCGCCAGAATACTGGCCGAACGGGGATATCAGGTTTCGGTGTTAACCGGACCAATA
TGCAGCGAAATATTAGCAGGCTCAGAATTCATTCAGCAAGTATATTTATATCGGCCCCGCATGTCCTTAAATACGTTGCG
GGCGGCGGGTTTTGATGCGGTTATCGATTTTGATGACGTGACCAGCTATGAACGCTTTAAATTACTCGCCGATTTACGGG
CGACCAGCGTGATTGGTTTTAATAAAGAGCCCTATAAACTTTACGATCACTCAATCGCTTTTTTTGACGGCAACAGCCAT
ATTTCCCTGCGCTATAAGCAGGTGGTGAAGCTGTTTGGCATCGTTGACGACCGCCCGTATCACTATCATCTCCCCGGCTG
CCGCCATGAGCGGGAGAAAGTGGCCCGCTTGCTTTCTCAGGCCGGAGAGGTCGAACTGCGTATCGCCATTAACCCTTTTA
CCGCCTCCGAGGATAAAGACTTCTGTCGTCACCAGGTGGCGACCCTGGTCGAGCGGCTACATGCTCTGCCTTACCGGGTC
TGTATCGTGATGGTGGGGCGCAGTGAAAAAATCCGCCAGCTGGGGCTGGATATGGCGCTGTACATCGCCGACAGCACCAT
CAACTCCGCCGTAGAAGTGATCCGCAGCTGTGATTTAGTCATTACGCCGGACACCTCGATCGTGCATATTGCCCGGGCTT
TCGATAAGCCGATGGTGGCGGTCTATAACAAACGCAAACTCAAGAATACCGGGCTGCCCGGCTATCACATCTGGGCGCCG
GGCTATGACAAGGCGAAGCAGATAGTCTGTGAAGAAGCGAATGTCGCCGATGTGGCGATTGAGTCGGTGTGGCCCGTGAT
TAAAGAGCAGGCCGACCGGCTGGTCGCCGCCCGCAGTTGA

Upstream 100 bases:

>100_bases
AGCCTTTTTTAGCTGGCTGGCGCCGCAGGTGAAGGGCATGACGCTGGCAGAATATTACCAGCGGAAAATTACACAGCGCT
AACACAGCTCAAGGTACCGT

Downstream 100 bases:

>100_bases
TTTAAAAAGTTAATATAAAAAGGGCCGCTGACGGCCCTTTTTGTTAGCGTTTTTCCGCCACCCCTTTGCTGAGCGCAATG
CCCAGCGGCAGCCAGAACAG

Product: putative heptosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 359

Protein sequence:

>359_residues
MRILKQLTRKKNAFFRGIKFNLINYRYRNKPARKAFDPAAVRRVLLLRLDDKVGDMVVTTGCARILAERGYQVSVLTGPI
CSEILAGSEFIQQVYLYRPRMSLNTLRAAGFDAVIDFDDVTSYERFKLLADLRATSVIGFNKEPYKLYDHSIAFFDGNSH
ISLRYKQVVKLFGIVDDRPYHYHLPGCRHEREKVARLLSQAGEVELRIAINPFTASEDKDFCRHQVATLVERLHALPYRV
CIVMVGRSEKIRQLGLDMALYIADSTINSAVEVIRSCDLVITPDTSIVHIARAFDKPMVAVYNKRKLKNTGLPGYHIWAP
GYDKAKQIVCEEANVADVAIESVWPVIKEQADRLVAARS

Sequences:

>Translated_359_residues
MRILKQLTRKKNAFFRGIKFNLINYRYRNKPARKAFDPAAVRRVLLLRLDDKVGDMVVTTGCARILAERGYQVSVLTGPI
CSEILAGSEFIQQVYLYRPRMSLNTLRAAGFDAVIDFDDVTSYERFKLLADLRATSVIGFNKEPYKLYDHSIAFFDGNSH
ISLRYKQVVKLFGIVDDRPYHYHLPGCRHEREKVARLLSQAGEVELRIAINPFTASEDKDFCRHQVATLVERLHALPYRV
CIVMVGRSEKIRQLGLDMALYIADSTINSAVEVIRSCDLVITPDTSIVHIARAFDKPMVAVYNKRKLKNTGLPGYHIWAP
GYDKAKQIVCEEANVADVAIESVWPVIKEQADRLVAARS
>Mature_359_residues
MRILKQLTRKKNAFFRGIKFNLINYRYRNKPARKAFDPAAVRRVLLLRLDDKVGDMVVTTGCARILAERGYQVSVLTGPI
CSEILAGSEFIQQVYLYRPRMSLNTLRAAGFDAVIDFDDVTSYERFKLLADLRATSVIGFNKEPYKLYDHSIAFFDGNSH
ISLRYKQVVKLFGIVDDRPYHYHLPGCRHEREKVARLLSQAGEVELRIAINPFTASEDKDFCRHQVATLVERLHALPYRV
CIVMVGRSEKIRQLGLDMALYIADSTINSAVEVIRSCDLVITPDTSIVHIARAFDKPMVAVYNKRKLKNTGLPGYHIWAP
GYDKAKQIVCEEANVADVAIESVWPVIKEQADRLVAARS

Specific function: Adds the terminal N-acetyl-D-glucosamine group on the glucose(II) group of LPS [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790053, Length=372, Percent_Identity=26.8817204301075, Blast_Score=105, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: =2.4.1.56 [H]

Molecular weight: Translated: 40839; Mature: 40839

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRILKQLTRKKNAFFRGIKFNLINYRYRNKPARKAFDPAAVRRVLLLRLDDKVGDMVVTT
CHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHCCCHHHHHHHHHHHCCCCCCCCHHHH
GCARILAERGYQVSVLTGPICSEILAGSEFIQQVYLYRPRMSLNTLRAAGFDAVIDFDDV
HHHHHHHHCCCEEEEEECHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEECHHC
TSYERFKLLADLRATSVIGFNKEPYKLYDHSIAFFDGNSHISLRYKQVVKLFGIVDDRPY
CCHHHHHHHHHHHHHEEECCCCCCCEEECCEEEEEECCCEEEEHHHHHHHHHHHCCCCCE
HYHLPGCRHEREKVARLLSQAGEVELRIAINPFTASEDKDFCRHQVATLVERLHALPYRV
EEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEE
CIVMVGRSEKIRQLGLDMALYIADSTINSAVEVIRSCDLVITPDTSIVHIARAFDKPMVA
EEEEECCCHHHHHHCCCEEEEEECHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCEE
VYNKRKLKNTGLPGYHIWAPGYDKAKQIVCEEANVADVAIESVWPVIKEQADRLVAARS
HHCCHHHCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRILKQLTRKKNAFFRGIKFNLINYRYRNKPARKAFDPAAVRRVLLLRLDDKVGDMVVTT
CHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHCCCHHHHHHHHHHHCCCCCCCCHHHH
GCARILAERGYQVSVLTGPICSEILAGSEFIQQVYLYRPRMSLNTLRAAGFDAVIDFDDV
HHHHHHHHCCCEEEEEECHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCCCCEEEECHHC
TSYERFKLLADLRATSVIGFNKEPYKLYDHSIAFFDGNSHISLRYKQVVKLFGIVDDRPY
CCHHHHHHHHHHHHHEEECCCCCCCEEECCEEEEEECCCEEEEHHHHHHHHHHHCCCCCE
HYHLPGCRHEREKVARLLSQAGEVELRIAINPFTASEDKDFCRHQVATLVERLHALPYRV
EEECCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCEE
CIVMVGRSEKIRQLGLDMALYIADSTINSAVEVIRSCDLVITPDTSIVHIARAFDKPMVA
EEEEECCCHHHHHHCCCEEEEEECHHHHHHHHHHHHCCEEECCCCHHHHHHHHHCCCCEE
VYNKRKLKNTGLPGYHIWAPGYDKAKQIVCEEANVADVAIESVWPVIKEQADRLVAARS
HHCCHHHCCCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1624462; 8041620; 9278503 [H]